BLASTX nr result

ID: Coptis25_contig00012627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012627
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207...   149   2e-34
ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|NP_565311.1| uncharacterized protein [Arabidopsis thaliana] ...   144   1e-32
ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arab...   142   3e-32
gb|AAM65381.1| unknown [Arabidopsis thaliana]                         142   4e-32

>ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]
           gi|449519980|ref|XP_004167012.1| PREDICTED:
           uncharacterized protein LOC101228588 [Cucumis sativus]
          Length = 176

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/95 (73%), Positives = 85/95 (89%)
 Frame = -2

Query: 287 FFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGTIR 108
           F V+V E+N++LDT  MPM+LT V +ALFAK+LMMYDES+S+E IERKI+NAP GQGT+R
Sbjct: 50  FTVDVPESNSFLDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVR 109

Query: 107 MLSREEWDEIQEVRPRTPFESKLARPKARLRTDEP 3
           MLSR+EW+EI+EVRPRTPFESKLARP AR+RT EP
Sbjct: 110 MLSRQEWEEIREVRPRTPFESKLARPNARIRTGEP 144


>ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|222838735|gb|EEE77100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/94 (72%), Positives = 82/94 (87%)
 Frame = -2

Query: 284 FVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGTIRM 105
           FV+V E+ ++LDT  MPM+LT V  ALFAK+LMMYD+S SQE IERKI+NAP GQGT+RM
Sbjct: 57  FVQVPESLSFLDTATMPMILTVVGTALFAKLLMMYDDSHSQEMIERKIKNAPVGQGTVRM 116

Query: 104 LSREEWDEIQEVRPRTPFESKLARPKARLRTDEP 3
           L+REEW+E +EVRPRTPFESKLARP AR+RT+EP
Sbjct: 117 LTREEWEEFREVRPRTPFESKLARPNARIRTEEP 150


>ref|NP_565311.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197972|gb|AAD25844.2| expressed protein
           [Arabidopsis thaliana] gi|20198213|gb|AAM15465.1|
           expressed protein [Arabidopsis thaliana]
           gi|51971539|dbj|BAD44434.1| unknown protein [Arabidopsis
           thaliana] gi|51971797|dbj|BAD44563.1| unknown protein
           [Arabidopsis thaliana] gi|107738176|gb|ABF83655.1|
           At2g04340 [Arabidopsis thaliana]
           gi|330250727|gb|AEC05821.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 173

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = -2

Query: 287 FFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGTIR 108
           F VEV E+ +YLDT  MPM L  V +ALFAKVLMM D+SKSQE IERKI+NAP GQGT+R
Sbjct: 49  FLVEVPESRSYLDTATMPMFLAVVGIALFAKVLMMIDDSKSQEMIERKIKNAPQGQGTVR 108

Query: 107 MLSREEWDEIQEVRPRTPFESKLARPKARLRTDEP 3
           M+ REEWDE +EVRPRTPFESKLARP A++RT EP
Sbjct: 109 MIDREEWDEFREVRPRTPFESKLARPNAQIRTGEP 143


>ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arabidopsis lyrata subsp.
           lyrata] gi|297329475|gb|EFH59894.1| hypothetical protein
           ARALYDRAFT_899238 [Arabidopsis lyrata subsp. lyrata]
          Length = 173

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/95 (71%), Positives = 79/95 (83%)
 Frame = -2

Query: 287 FFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGTIR 108
           F VEV E+ +YLDT  MPM L  V +ALFAKVLMM D+SKSQE IERKI+NAP GQGT+R
Sbjct: 49  FLVEVPESRSYLDTATMPMFLAVVGIALFAKVLMMIDDSKSQEMIERKIKNAPPGQGTVR 108

Query: 107 MLSREEWDEIQEVRPRTPFESKLARPKARLRTDEP 3
           ++ REEWDE +EVRPRTPFESKLARP A++RT EP
Sbjct: 109 IIEREEWDEFREVRPRTPFESKLARPNAQIRTGEP 143


>gb|AAM65381.1| unknown [Arabidopsis thaliana]
          Length = 172

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/95 (71%), Positives = 78/95 (82%)
 Frame = -2

Query: 287 FFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGTIR 108
           F VEV E+ +YLDT  MPM L  V +ALFA VLMM D+SKSQE IERKI+NAP GQGT+R
Sbjct: 48  FLVEVPESRSYLDTATMPMFLAVVGIALFANVLMMIDDSKSQEMIERKIKNAPQGQGTVR 107

Query: 107 MLSREEWDEIQEVRPRTPFESKLARPKARLRTDEP 3
           M+ REEWDE +EVRPRTPFESKLARP A++RT EP
Sbjct: 108 MIEREEWDEFREVRPRTPFESKLARPNAQIRTGEP 142


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