BLASTX nr result

ID: Coptis25_contig00012619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012619
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
gb|ABK93168.1| unknown [Populus trichocarpa]                          179   3e-43
ref|XP_002284696.1| PREDICTED: random slug protein 5 [Vitis vini...   177   8e-43
ref|XP_002328935.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002303745.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|222846613|gb|EEE84160.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/128 (65%), Positives = 99/128 (77%)
 Frame = -3

Query: 384 LSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFK 205
           LSWR+  +P G IS S+IPNELAQ K+F+QG+DKQ RPI VV G  H P K  G L+EFK
Sbjct: 52  LSWRRSIIPNGFISSSEIPNELAQNKLFMQGFDKQNRPIVVVFGAGHKPYK--GSLEEFK 109

Query: 204 RFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIHAYRGALSILQDCYPERLGKVLL 25
           RFV Y  D++CARM  GQEKF+ IADL GWGY+N DI  Y  ALSILQDC+PERLGK+ +
Sbjct: 110 RFVAYTLDRICARMPAGQEKFVSIADLEGWGYTNSDIRGYLAALSILQDCFPERLGKLFI 169

Query: 24  LHVPYIFM 1
           +HVPYIFM
Sbjct: 170 VHVPYIFM 177


>gb|ABK93168.1| unknown [Populus trichocarpa]
          Length = 255

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/128 (65%), Positives = 99/128 (77%)
 Frame = -3

Query: 384 LSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFK 205
           LSWR+  +P G IS S+IPNELAQ K+F+QG+DKQ RPI VV G  H P K  G L+EFK
Sbjct: 75  LSWRRSIIPNGFISSSEIPNELAQNKLFMQGFDKQNRPIVVVFGAGHKPYK--GSLEEFK 132

Query: 204 RFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIHAYRGALSILQDCYPERLGKVLL 25
           RFV Y  D++CARM  GQEKF+ IADL GWGY+N DI  Y  ALSILQDC+PERLGK+ +
Sbjct: 133 RFVAYTLDRICARMPAGQEKFVSIADLEGWGYTNSDIRGYLAALSILQDCFPERLGKLFI 192

Query: 24  LHVPYIFM 1
           +HVPYIFM
Sbjct: 193 VHVPYIFM 200


>ref|XP_002284696.1| PREDICTED: random slug protein 5 [Vitis vinifera]
           gi|147860850|emb|CAN83160.1| hypothetical protein
           VITISV_022555 [Vitis vinifera]
           gi|297734520|emb|CBI15767.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  177 bits (449), Expect = 8e-43
 Identities = 86/128 (67%), Positives = 98/128 (76%)
 Frame = -3

Query: 384 LSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFK 205
           L WRQ +VP GSIS S + NE+AQ KMFLQG DKQ RPI+VVLG  H   +  G LDEFK
Sbjct: 76  LKWRQTFVPNGSISLSQVRNEVAQNKMFLQGLDKQGRPISVVLGAKHFQYQ--GSLDEFK 133

Query: 204 RFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIHAYRGALSILQDCYPERLGKVLL 25
           RF+VY  DK+C RM  GQEKF+VI DL GWGYSN D+ AY GALSILQD YPERLGK+ +
Sbjct: 134 RFLVYAFDKICTRMPPGQEKFVVIGDLEGWGYSNSDMRAYLGALSILQDYYPERLGKLFI 193

Query: 24  LHVPYIFM 1
           +H PYIFM
Sbjct: 194 IHAPYIFM 201


>ref|XP_002328935.1| predicted protein [Populus trichocarpa] gi|222839365|gb|EEE77702.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/128 (64%), Positives = 99/128 (77%)
 Frame = -3

Query: 384 LSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFK 205
           L WR+E+VP GS+S  + PNE+AQ KMFLQG DK+ RPI V+LG  H+ +K  GGL+EFK
Sbjct: 50  LKWRREFVPNGSVSLLETPNEVAQNKMFLQGSDKKGRPITVILGARHVRSK--GGLEEFK 107

Query: 204 RFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIHAYRGALSILQDCYPERLGKVLL 25
           RFVVY  DK+C+RM  GQEKF+VI DL GWGY+N DIH Y   LSILQ+ YPERL KV L
Sbjct: 108 RFVVYGFDKICSRMPPGQEKFVVIGDLEGWGYANSDIHGYLAGLSILQEYYPERLAKVFL 167

Query: 24  LHVPYIFM 1
           +H PYIFM
Sbjct: 168 VHAPYIFM 175


>ref|XP_002303745.1| predicted protein [Populus trichocarpa] gi|222841177|gb|EEE78724.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/128 (63%), Positives = 98/128 (76%)
 Frame = -3

Query: 384 LSWRQEYVPKGSISESDIPNELAQKKMFLQGYDKQERPIAVVLGKMHIPNKRTGGLDEFK 205
           LSWR+ ++P G I+ S+IPNELAQ K F+QG DKQ RP+ VV G  H P K  G  +EFK
Sbjct: 51  LSWRRSFIPNGFIAPSEIPNELAQNKFFMQGADKQNRPVVVVFGARHKPYK--GSFEEFK 108

Query: 204 RFVVYIHDKVCARMLRGQEKFIVIADLRGWGYSNCDIHAYRGALSILQDCYPERLGKVLL 25
           RFVVY  +++CA M  G+EKF+ IADL+GWGYSN DI  Y  ALSILQDCYPERLGK+ +
Sbjct: 109 RFVVYTLERICAIMPAGEEKFVSIADLKGWGYSNSDIRGYLAALSILQDCYPERLGKLFI 168

Query: 24  LHVPYIFM 1
           +HVPYIFM
Sbjct: 169 VHVPYIFM 176


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