BLASTX nr result

ID: Coptis25_contig00012613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012613
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264041.2| PREDICTED: probable LRR receptor-like serine...    91   1e-16
emb|CBI25536.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002531443.1| serine-threonine protein kinase, plant-type,...    89   3e-16
ref|XP_002263908.2| PREDICTED: LRR receptor-like serine/threonin...    89   4e-16
ref|XP_002324585.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|XP_002264041.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Vitis vinifera]
          Length = 862

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/85 (54%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -2

Query: 310 GNNSINGDIRLPS-SPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           G+NS+ G + LPS S   ++  +D S+N IHG+L   IG IFPGL  LNLS+N+L+G IP
Sbjct: 304 GSNSLTGVLDLPSNSKHSHMLLLDFSSNCIHGELPPFIGSIFPGLEVLNLSRNALQGNIP 363

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIPE 59
           SS+G+++ L +LDLSNNN SG++PE
Sbjct: 364 SSMGDMEQLVSLDLSNNNLSGQLPE 388



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/84 (36%), Positives = 51/84 (60%)
 Frame = -2

Query: 313 LGNNSINGDIRLPSSPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           L NN+ +G+I        +L  +D+S+N + G++   IGD F  L +L+LS+N L+G +P
Sbjct: 425 LDNNNFSGEISRGFLNSSSLQALDISSNSLWGQIPNWIGD-FSVLSTLSLSRNHLDGVVP 483

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIP 62
           +SL  + +L  LDLS+N     +P
Sbjct: 484 TSLCKLNELRFLDLSHNKIGPTLP 507


>emb|CBI25536.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/85 (54%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -2

Query: 310 GNNSINGDIRLPS-SPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           G+NS+ G + LPS S   ++  +D S+N IHG+L   IG IFPGL  LNLS+N+L+G IP
Sbjct: 240 GSNSLTGVLDLPSNSKHSHMLLLDFSSNCIHGELPPFIGSIFPGLEVLNLSRNALQGNIP 299

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIPE 59
           SS+G+++ L +LDLSNNN SG++PE
Sbjct: 300 SSMGDMEQLVSLDLSNNNLSGQLPE 324



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/84 (36%), Positives = 51/84 (60%)
 Frame = -2

Query: 313 LGNNSINGDIRLPSSPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           L NN+ +G+I        +L  +D+S+N + G++   IGD F  L +L+LS+N L+G +P
Sbjct: 361 LDNNNFSGEISRGFLNSSSLQALDISSNSLWGQIPNWIGD-FSVLSTLSLSRNHLDGVVP 419

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIP 62
           +SL  + +L  LDLS+N     +P
Sbjct: 420 TSLCKLNELRFLDLSHNKIGPTLP 443


>ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223528936|gb|EEF30930.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 912

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/85 (50%), Positives = 54/85 (63%)
 Frame = -2

Query: 313 LGNNSINGDIRLPSSPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           L NNS++G ++LP  P VNL  +D+SNN +H  +   IG   P L  LN+S N  +G IP
Sbjct: 381 LVNNSLSGHLQLPLHPHVNLLALDISNNHVHDHIPLEIGTFLPKLELLNMSSNGFDGSIP 440

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIPE 59
           SS GN+  L  LDLSNN  SG IPE
Sbjct: 441 SSFGNMNSLRILDLSNNQLSGSIPE 465


>ref|XP_002263908.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1047

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/84 (51%), Positives = 55/84 (65%)
 Frame = -2

Query: 313 LGNNSINGDIRLPSSPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           L NNS NG   LPS P + L  +D+S N   G L  N G++ P L  LNL++N+ EG+IP
Sbjct: 471 LRNNSFNGQFPLPSYPNMLLLSVDISKNNFSGLLQENFGEMLPCLEWLNLAENAFEGQIP 530

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIP 62
             + NI  LW LDLS+NNFSGE+P
Sbjct: 531 PLICNISSLWFLDLSSNNFSGEVP 554


>ref|XP_002324585.1| predicted protein [Populus trichocarpa] gi|222866019|gb|EEF03150.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = -2

Query: 313 LGNNSINGDIRLPSSPMVNLTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIP 134
           L N+S++G ++LP+   VNL+R+D+S N I  ++ T IG  FP L  LNLS+N   G IP
Sbjct: 232 LVNSSLSGSLQLPNDSHVNLSRLDISRNHIQNQIPTKIGAYFPWLEFLNLSRNYFSGSIP 291

Query: 133 SSLGNIKDLWTLDLSNNNFSGEIPE 59
           SS+ N+  L  LDLSNN  SG IPE
Sbjct: 292 SSISNMSSLGVLDLSNNGLSGNIPE 316



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 45/65 (69%)
 Frame = -2

Query: 256 LTRIDVSNNQIHGKLLTNIGDIFPGLRSLNLSKNSLEGRIPSSLGNIKDLWTLDLSNNNF 77
           ++ ID+S N + G++   +G++   ++ LNLS NSL G IP +  N+K++ +LDLS NN 
Sbjct: 576 ISGIDLSCNNLTGEIPVELGNL-SNIQVLNLSHNSLTGPIPPTFSNLKEIESLDLSYNNL 634

Query: 76  SGEIP 62
           +GEIP
Sbjct: 635 NGEIP 639


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