BLASTX nr result
ID: Coptis25_contig00012604
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00012604 (1899 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun... 625 e-177 emb|CBI34928.3| unnamed protein product [Vitis vinifera] 608 e-171 ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu... 599 e-169 ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subun... 582 e-164 ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subun... 577 e-162 >ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1 [Vitis vinifera] Length = 438 Score = 625 bits (1613), Expect = e-177 Identities = 300/433 (69%), Positives = 358/433 (82%), Gaps = 4/433 (0%) Frame = +1 Query: 22 TITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDA 201 T+TQREQWMVES+V ++Y+L SS P +AQ+++L++QRD+H+E+L GL+QLGPSFCVLDA Sbjct: 10 TVTQREQWMVESQVFQMYELLSSVPRNAQSVLLELQRDKHIEFLTNGLRQLGPSFCVLDA 69 Query: 202 NRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVN 381 NRPWLCYWILHS+ALLG+SVD +LEN +DFLS CQD + QMPHLATTYAA+N Sbjct: 70 NRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQMPHLATTYAAIN 129 Query: 382 SLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILD 561 +L+TLGG R+LSSINR K++ FL MKD SG FRMH+AGEMDVRACYTAISVAS+L ILD Sbjct: 130 ALITLGGHRSLSSINRGKVYTFLRRMKDPSGAFRMHDAGEMDVRACYTAISVASVLTILD 189 Query: 562 DELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVV 741 DELV+ VGNFIL CQTYEGGI+GEPGSEAHGGYTFCGLATM+LI E +RLDL SL+DWVV Sbjct: 190 DELVKGVGNFILSCQTYEGGISGEPGSEAHGGYTFCGLATMVLIGEVNRLDLTSLIDWVV 249 Query: 742 FRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEGETRGSTQNVG 921 FRQGVE GFQGR NKLVDGCYSFWQGGVFALIQ+L S+ + L+L G S Q Sbjct: 250 FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALIQKLHSIIEEQLRLLDAGGSAIDSPQ--- 306 Query: 922 SFNVSDLEEGSGSLNTYDKN----YSDIGFSYIKRPAESGPLFHSIALQQYILLCSQVQE 1089 ++ + SG +D + +S+IGF+++K PAE PLFHSIALQQYI+LCSQ+QE Sbjct: 307 ---LASISCHSGKRGLHDTSGSAKFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQE 363 Query: 1090 GGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPIHPLYNI 1269 GGF+DKPGK RDYYHTCYCLSGLSV Q+ +SKDADS P P+AVFGPYSNLLEPIHPLYN+ Sbjct: 364 GGFRDKPGKHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNV 423 Query: 1270 MLDRYYKAHDFFS 1308 +LD Y++AH+FFS Sbjct: 424 ILDLYHEAHEFFS 436 >emb|CBI34928.3| unnamed protein product [Vitis vinifera] Length = 421 Score = 608 bits (1569), Expect = e-171 Identities = 293/425 (68%), Positives = 350/425 (82%), Gaps = 4/425 (0%) Frame = +1 Query: 46 MVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDANRPWLCYW 225 MVES+V ++Y+L SS P +AQ+++L++QRD+H+E+L GL+QLGPSFCVLDANRPWLCYW Sbjct: 1 MVESQVFQMYELLSSVPRNAQSVLLELQRDKHIEFLTNGLRQLGPSFCVLDANRPWLCYW 60 Query: 226 ILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVNSLLTLGGE 405 ILHS+ALLG+SVD +LEN +DFLS CQD + QMPHLATTYAA+N+L+TLGG Sbjct: 61 ILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQMPHLATTYAAINALITLGGH 120 Query: 406 RALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILDDELVQNVG 585 R+LSSINR K++ FL MKD SG FRMH+AGEMDVRACYTAISVAS+L ILDDELV+ VG Sbjct: 121 RSLSSINRGKVYTFLRRMKDPSGAFRMHDAGEMDVRACYTAISVASVLTILDDELVKGVG 180 Query: 586 NFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVVFRQGVECG 765 NFIL CQTYEGGI+GEPGSEAHGGYTFCGLATM+LI E +RLDL SL+DWVVFRQGVE G Sbjct: 181 NFILSCQTYEGGISGEPGSEAHGGYTFCGLATMVLIGEVNRLDLTSLIDWVVFRQGVEGG 240 Query: 766 FQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEGETRGSTQNVGSFNVSDLE 945 FQGR NKLVDGCYSFWQGGVFALIQ+L S+ + L+L G S Q ++ + Sbjct: 241 FQGRTNKLVDGCYSFWQGGVFALIQKLHSIIEEQLRLLDAGGSAIDSPQ------LASIS 294 Query: 946 EGSGSLNTYDKN----YSDIGFSYIKRPAESGPLFHSIALQQYILLCSQVQEGGFKDKPG 1113 SG +D + +S+IGF+++K PAE PLFHSIALQQYI+LCSQ+QEGGF+DKPG Sbjct: 295 CHSGKRGLHDTSGSAKFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQEGGFRDKPG 354 Query: 1114 KSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPIHPLYNIMLDRYYKA 1293 K RDYYHTCYCLSGLSV Q+ +SKDADS P P+AVFGPYSNLLEPIHPLYN++LD Y++A Sbjct: 355 KHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNVILDLYHEA 414 Query: 1294 HDFFS 1308 H+FFS Sbjct: 415 HEFFS 419 >ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus communis] gi|223543347|gb|EEF44878.1| protein farnesyltransferase beta subunit, putative [Ricinus communis] Length = 438 Score = 599 bits (1544), Expect = e-169 Identities = 296/441 (67%), Positives = 350/441 (79%), Gaps = 5/441 (1%) Frame = +1 Query: 1 SMSNSRVTITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGP 180 S S R T +Q EQW+V+ +V +IY +F++ PH AQTLML++QRD+HMEYL +GLKQL Sbjct: 6 SSSRRRATASQHEQWIVQDQVFQIYDIFANIPHKAQTLMLELQRDKHMEYLTRGLKQLSS 65 Query: 181 SFCVLDANRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLA 360 SFCVLDANRPWLCYWILHS+ALLGES+D +LEN A+DFL+ CQD + Q+PHLA Sbjct: 66 SFCVLDANRPWLCYWILHSIALLGESIDYELENNAIDFLNRCQDPNGGFGGGPGQLPHLA 125 Query: 361 TTYAAVNSLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISV- 537 TTYAAVNSL+TLGG RALSSINR KL+ FL MKD SG FRMH+AGE+DVRACYTAISV Sbjct: 126 TTYAAVNSLVTLGGPRALSSINRGKLYTFLRRMKDPSGPFRMHDAGEIDVRACYTAISVC 185 Query: 538 ASILNILDDELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDL 717 A+ILNILDDELV++VGN+IL CQTYEGGIAGEPGSEAHGGYTFCGLATMILI+E +RLDL Sbjct: 186 ANILNILDDELVRDVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLATMILINEVNRLDL 245 Query: 718 PSLLDWVVFRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLN---VGE 888 SL++WVVFRQGVECGFQGR NKLVDGCYSFWQGGVFAL+QRL S+ G+H + G Sbjct: 246 SSLINWVVFRQGVECGFQGRTNKLVDGCYSFWQGGVFALLQRLRSIGGEHAAFSDAEAGH 305 Query: 889 GETRGSTQNVGSFNVS-DLEEGSGSLNTYDKNYSDIGFSYIKRPAESGPLFHSIALQQYI 1065 T S+++ G+ S D++E ++ G + PLFHS ALQQYI Sbjct: 306 CATESSSEDEGTDGDSTDVDEPG--------HFKQGGHGV------TVPLFHSSALQQYI 351 Query: 1066 LLCSQVQEGGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLE 1245 +LCSQ QEGGF+DKPGK+RDYYHTCYCLSGLSVCQ+ WSKD +S P P+AV GPYSNLLE Sbjct: 352 ILCSQEQEGGFRDKPGKARDYYHTCYCLSGLSVCQYSWSKDENSPPLPRAVLGPYSNLLE 411 Query: 1246 PIHPLYNIMLDRYYKAHDFFS 1308 PIHPLYN++ +Y AH+FFS Sbjct: 412 PIHPLYNVVSKQYDGAHEFFS 432 >ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subunit beta [Glycine max] Length = 455 Score = 582 bits (1501), Expect = e-164 Identities = 276/433 (63%), Positives = 339/433 (78%), Gaps = 5/433 (1%) Frame = +1 Query: 22 TITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDA 201 T++QREQWMVES+V +IYQLF++ P +AQTLML++QRD HM+Y++KGL+ L +F VLDA Sbjct: 19 TVSQREQWMVESQVFQIYQLFATIPRNAQTLMLELQRDNHMQYVSKGLRHLSSAFSVLDA 78 Query: 202 NRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVN 381 NRPWLCYWI HS+AL GESVD +LE+ A+DFL+ CQD + QMPH+ATTYAAVN Sbjct: 79 NRPWLCYWIFHSIALSGESVDDELEDNAIDFLNRCQDPNGGYAGGPGQMPHIATTYAAVN 138 Query: 382 SLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILD 561 SL+TLGGE++L+SINR+KL+ FL MK +GGFRMH+ GE+DVRACYTAISVAS+LNILD Sbjct: 139 SLITLGGEKSLASINRDKLYGFLRRMKQPNGGFRMHDEGEIDVRACYTAISVASVLNILD 198 Query: 562 DELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVV 741 DEL+QNVG++I+ CQTYEGGIAGEPGSEAHGGYTFCGLATMILI E + LDLP L+DWVV Sbjct: 199 DELIQNVGDYIISCQTYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNHLDLPRLVDWVV 258 Query: 742 FRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLK-----LNVGEGETRGS 906 FRQG ECGFQGR NKLVDGCYSFWQGG AL+QRL S+ + ++ V Sbjct: 259 FRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLSSIINKQMEETSQIFAVSYVSEAKE 318 Query: 907 TQNVGSFNVSDLEEGSGSLNTYDKNYSDIGFSYIKRPAESGPLFHSIALQQYILLCSQVQ 1086 + + S + + E G+ + ++ +I + +I PLFHSIALQQYILLC+Q Q Sbjct: 319 SLDGTSSHATCRGEHEGTSESSSSDFKNIAYKFINEWRAQEPLFHSIALQQYILLCAQEQ 378 Query: 1087 EGGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPIHPLYN 1266 EGG +DKPGK RD+YHTCYCLSGLS+CQ+ WSK DS P P V GPYSNLLEPIHPL+N Sbjct: 379 EGGLRDKPGKRRDHYHTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPYSNLLEPIHPLFN 438 Query: 1267 IMLDRYYKAHDFF 1305 ++L RY +AH+FF Sbjct: 439 VVLGRYREAHEFF 451 >ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subunit beta-like [Glycine max] Length = 455 Score = 577 bits (1486), Expect = e-162 Identities = 275/445 (61%), Positives = 339/445 (76%), Gaps = 17/445 (3%) Frame = +1 Query: 22 TITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDA 201 T++QR+QWMVES+V +IYQLF++ P AQ LML++QRD HM+YL+KGL+ L +F VLDA Sbjct: 19 TVSQRDQWMVESQVFQIYQLFATIPGSAQNLMLELQRDNHMQYLSKGLRHLSSAFSVLDA 78 Query: 202 NRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVN 381 NRPWLCYWI HS+ALLGESVD +LE+ +DFL+ CQD + QMPH+ATTYAAVN Sbjct: 79 NRPWLCYWIFHSIALLGESVDDELEDNTIDFLNRCQDPNGGYAGGPGQMPHIATTYAAVN 138 Query: 382 SLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILD 561 +L+TLGG+++L+SINR+KL+ FL MK +GGFRMH+ GE+DVRACYTAISVAS+LNILD Sbjct: 139 TLITLGGQKSLASINRDKLYGFLRRMKQSNGGFRMHDEGEIDVRACYTAISVASVLNILD 198 Query: 562 DELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVV 741 DEL++NVG++IL CQTYEGGIAGEPGSEAHGGYTFCGLATMILI E +RLDLP L++W V Sbjct: 199 DELIKNVGDYILSCQTYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNRLDLPRLVEWAV 258 Query: 742 FRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEGETRGSTQNVG 921 FRQG ECGFQGR NKLVDGCYSFWQGG AL+QRL S+ + ++ + Sbjct: 259 FRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLSSIINKQME------------EASQ 306 Query: 922 SFNVSDLEEGSGSLN-----------------TYDKNYSDIGFSYIKRPAESGPLFHSIA 1050 +F +SD+ E SL+ + +Y IG+++I PLFHSIA Sbjct: 307 TFTISDVSEAKESLDGTSSHATCHGKHEGTSQSCSADYKSIGYNFINEWRAQEPLFHSIA 366 Query: 1051 LQQYILLCSQVQEGGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPY 1230 LQQYILLC+Q Q GG +DKPGK RD+YHTCYCLSGLS+CQ+ WSK DS P P V GPY Sbjct: 367 LQQYILLCAQEQAGGLRDKPGKRRDHYHTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPY 426 Query: 1231 SNLLEPIHPLYNIMLDRYYKAHDFF 1305 SNLLEPIHPL+N++L+RY +AH FF Sbjct: 427 SNLLEPIHPLFNVVLERYREAHVFF 451