BLASTX nr result

ID: Coptis25_contig00012598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012598
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39127.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002270030.1| PREDICTED: uncharacterized protein At5g39865...   120   1e-25
ref|XP_002308331.1| hypothetical protein POPTRDRAFT_417738 [Popu...   115   7e-24
emb|CBI24996.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002263752.1| PREDICTED: uncharacterized protein At5g39865...   114   1e-23

>emb|CBI39127.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
 Frame = +2

Query: 275 KGRYIGGANAVVALHEQGKLLRLLEGLPRDQST-SPCDGCGGMCFILCYNCNGSCKISPD 451
           KGR+IGGA+ VV LHEQGKL +LLEG+P   +  SPC GCGGM F+LC+NCNGSCK+  D
Sbjct: 96  KGRHIGGADEVVGLHEQGKLKKLLEGIPLSPTNNSPCKGCGGMKFLLCFNCNGSCKVIAD 155

Query: 452 ---RSDDDLSVQCPNCNENGFLVCPMCC 526
                DD L ++CP CNENG + CP+CC
Sbjct: 156 GDGDGDDLLHIRCPECNENGLIKCPICC 183


>ref|XP_002270030.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 290

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
 Frame = +2

Query: 275 KGRYIGGANAVVALHEQGKLLRLLEGLPRDQST-SPCDGCGGMCFILCYNCNGSCKISPD 451
           KGR+IGGA+ VV LHEQGKL +LLEG+P   +  SPC GCGGM F+LC+NCNGSCK+  D
Sbjct: 203 KGRHIGGADEVVGLHEQGKLKKLLEGIPLSPTNNSPCKGCGGMKFLLCFNCNGSCKVIAD 262

Query: 452 ---RSDDDLSVQCPNCNENGFLVCPMCC 526
                DD L ++CP CNENG + CP+CC
Sbjct: 263 GDGDGDDLLHIRCPECNENGLIKCPICC 290


>ref|XP_002308331.1| hypothetical protein POPTRDRAFT_417738 [Populus trichocarpa]
           gi|222854307|gb|EEE91854.1| hypothetical protein
           POPTRDRAFT_417738 [Populus trichocarpa]
          Length = 165

 Score =  115 bits (287), Expect = 7e-24
 Identities = 46/83 (55%), Positives = 62/83 (74%)
 Frame = +2

Query: 275 KGRYIGGANAVVALHEQGKLLRLLEGLPRDQSTSPCDGCGGMCFILCYNCNGSCKISPDR 454
           KGRYIGGA+ V+ LHEQG+L +LL G+P + S SPC+GCG   F++C NCNGSCK+  D 
Sbjct: 83  KGRYIGGADEVIGLHEQGRLKKLLVGIPLNLSNSPCNGCGNKRFVVCSNCNGSCKVFEDD 142

Query: 455 SDDDLSVQCPNCNENGFLVCPMC 523
            +++  ++CP CNENG   CP+C
Sbjct: 143 QNEEKCIRCPECNENGLAKCPIC 165


>emb|CBI24996.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  114 bits (285), Expect = 1e-23
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = +2

Query: 275 KGRYIGGANAVVALHEQGKLLRLLEGLPRDQSTSPCDGCGGMCFILCYNCNGSCKISPDR 454
           KGRYIGGA  V+ LHEQG+L  L  GLP D S  PC+GC G+ F++CY C GS KI  D 
Sbjct: 316 KGRYIGGAEQVLGLHEQGRLRALFHGLPIDHSKGPCEGCAGIRFVMCYKCCGSRKIVSDD 375

Query: 455 SDDDLSVQCPNCNENGFLVCPMCC 526
            +  LS  CP+CNENG ++CP+CC
Sbjct: 376 GNHGLSNNCPHCNENGLIICPICC 399


>ref|XP_002263752.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 376

 Score =  114 bits (285), Expect = 1e-23
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = +2

Query: 275 KGRYIGGANAVVALHEQGKLLRLLEGLPRDQSTSPCDGCGGMCFILCYNCNGSCKISPDR 454
           KGRYIGGA  V+ LHEQG+L  L  GLP D S  PC+GC G+ F++CY C GS KI  D 
Sbjct: 293 KGRYIGGAEQVLGLHEQGRLRALFHGLPIDHSKGPCEGCAGIRFVMCYKCCGSRKIVSDD 352

Query: 455 SDDDLSVQCPNCNENGFLVCPMCC 526
            +  LS  CP+CNENG ++CP+CC
Sbjct: 353 GNHGLSNNCPHCNENGLIICPICC 376


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