BLASTX nr result

ID: Coptis25_contig00012597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012597
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265739.1| PREDICTED: pathogenesis-related genes transc...   189   1e-45
ref|NP_001233991.1| pathogenesis-related genes transcriptional a...   169   2e-39
ref|XP_002325634.1| AP2/ERF domain-containing transcription fact...   159   2e-36
gb|AAC14323.1| TSI1 [Nicotiana tabacum]                               159   2e-36
ref|XP_003544338.1| PREDICTED: pathogenesis-related genes transc...   145   3e-32

>ref|XP_002265739.1| PREDICTED: pathogenesis-related genes transcriptional activator
           PTI6 [Vitis vinifera]
          Length = 285

 Score =  189 bits (480), Expect = 1e-45
 Identities = 123/274 (44%), Positives = 151/274 (55%), Gaps = 16/274 (5%)
 Frame = -3

Query: 915 MTISPPVKFSEHVLTTTKLVHHQKS----------SKFRHKVVRIIVTDVDATXXXXXXX 766
           M I P VKFSEHV+TT+K +   +S           + RH+VVRII TD DAT       
Sbjct: 15  MPIRPAVKFSEHVVTTSKHMQELESVSASECLSGRRRVRHRVVRIIHTDGDATDSSSDDE 74

Query: 765 XEGKFVRRVKRHVREIDIKLQQQEVKLVLGTEXXXXXXXXXXKLPVPTXXXXXXXXXXXX 586
              + V+RVKRHV EI ++   +                     P               
Sbjct: 75  V--ELVQRVKRHVTEISLQPSVES--------------------PQKEPTKKRVLRLPES 112

Query: 585 XXXQRKKYRGVRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAI 406
              +RKK+RGVRQRPWGRWAAEIRDPT RKRLWLGT++T EEAA+ YD AA+ LKG NA+
Sbjct: 113 ESTRRKKFRGVRQRPWGRWAAEIRDPTRRKRLWLGTYDTPEEAARVYDKAAVSLKGPNAV 172

Query: 405 TNFPTTPPDHF-----YSKSASASEEDVSVKSPTSVLN-GDFFPFSPFTYGDAADMFGFD 244
           TNFP+            S+S + S   V+  SPTSVL   +  PF+ F Y D  D FGFD
Sbjct: 173 TNFPSVVKTESVATAGQSQSETCSLPSVTASSPTSVLRYNEEAPFNGFGYCD-VDAFGFD 231

Query: 243 FELPLTLPDIELPKRYAAVGEEEFGEFDVDYFSV 142
           F++PLTLPDI   K    + E+EFGEFD D F V
Sbjct: 232 FDVPLTLPDIFSNKH---LEEDEFGEFDPDDFLV 262


>ref|NP_001233991.1| pathogenesis-related genes transcriptional activator PTI6 [Solanum
           lycopersicum] gi|7531181|sp|O04682.1|PTI6_SOLLC RecName:
           Full=Pathogenesis-related genes transcriptional
           activator PTI6; AltName: Full=PTO-interacting protein 6
           gi|2213785|gb|AAC49741.1| Pti6 [Solanum lycopersicum]
          Length = 248

 Score =  169 bits (427), Expect = 2e-39
 Identities = 109/270 (40%), Positives = 144/270 (53%), Gaps = 15/270 (5%)
 Frame = -3

Query: 903 PPVKFSEHVLTTTKLV---HHQKSSKFRHKVVRIIVTDVDATXXXXXXXXEGKFVRRVKR 733
           P +KF++H++TT K V   H++KS+    +VVRII+TD DAT            VRRVKR
Sbjct: 7   PVIKFTQHIVTTNKHVFSEHNEKSNSELQRVVRIILTDADATDSSDDEGR--NTVRRVKR 64

Query: 732 HVREIDIKLQQQEVKLVLGTEXXXXXXXXXXKLPVPTXXXXXXXXXXXXXXXQRKKYRGV 553
           HV EI++    + +                                      +RKK+RGV
Sbjct: 65  HVTEINLMPSTKSI-----------------------GDRKRRSVSPDSDVTRRKKFRGV 101

Query: 552 RQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFP------- 394
           RQRPWGRWAAEIRDPT  KR+WLGT++T EEAA  YD AA+ LKG +A+TNFP       
Sbjct: 102 RQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEV 161

Query: 393 ----TTPPDHFYSKSASASEEDVSVKSPTSVL-NGDFFPFSPFTYGDAADMFGFDFELPL 229
               T       +     SE DV++ SPTSVL + DF PF    + +  D FGFD +   
Sbjct: 162 TVTVTETETESVADGGDKSENDVAL-SPTSVLCDNDFAPFDNLGFCE-VDAFGFDVDSLF 219

Query: 228 TLPDIELPKRYAAVGEEEFGEFDVDYFSVE 139
            LPD  + ++Y     +EFGEFD D F++E
Sbjct: 220 RLPDFAMTEKYYG---DEFGEFDFDDFALE 246


>ref|XP_002325634.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222862509|gb|EEF00016.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 313

 Score =  159 bits (401), Expect = 2e-36
 Identities = 120/324 (37%), Positives = 155/324 (47%), Gaps = 63/324 (19%)
 Frame = -3

Query: 915 MTISPPVKFSEHVLTTTKLVHHQK----SSKFR-HKVVRIIVTDVDATXXXXXXXXEG-- 757
           M++   VKF+EHV  T KL+ +Q+    SS+ R  ++VRII TD DAT        E   
Sbjct: 1   MSVQSKVKFTEHVFATKKLIKNQQQQHPSSRIRGQRLVRIIHTDPDATDSSSDEGEEQEQ 60

Query: 756 --KFVRRVKRHVREIDIKLQQQEVKLVLGTEXXXXXXXXXXKLPVPTXXXXXXXXXXXXX 583
             +FVRRVKR V EI + L+Q+       +               P+             
Sbjct: 61  ERRFVRRVKRQVSEIRL-LEQETTAPAAPSSRTSNDDHRDPTRKRPSSRLPVSDVTR--- 116

Query: 582 XXQRKKYRGVRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAIT 403
              RK +RGVRQRPWG+WAAEIRDPT RKR+WLGTFNTAEEAA  YD AA+ LKG +A+T
Sbjct: 117 ---RKNFRGVRQRPWGKWAAEIRDPTRRKRVWLGTFNTAEEAATVYDRAAVKLKGPDAVT 173

Query: 402 NFPT--------------------------------------------TPPDHFYSKSAS 355
           NFPT                                            TP D   ++ A 
Sbjct: 174 NFPTKSVLTVRANVDGPSDFQCESCDSPSSSGVNVMPSPTSVLRYEELTPFDPVLTEKAK 233

Query: 354 ASEED---------VSVKSPTSVLN-GDFFPFSPFTYGDAADMFGFDFELPLTLPDIELP 205
             ++          +S+ SPTSVL   +  PF    YGD  D FGF  ++P  LPD+  P
Sbjct: 234 VIDDHRESCESPLRLSMTSPTSVLRYEELTPFDSLAYGD-VDAFGFKIDVPFGLPDLMFP 292

Query: 204 KRYAAVGEEEFGEFDVDYFSVEVV 133
            ++  V EEEF   D+D F VE +
Sbjct: 293 GKF--VDEEEF--VDLDDFLVEAI 312


>gb|AAC14323.1| TSI1 [Nicotiana tabacum]
          Length = 251

 Score =  159 bits (401), Expect = 2e-36
 Identities = 110/266 (41%), Positives = 138/266 (51%), Gaps = 13/266 (4%)
 Frame = -3

Query: 897 VKFSEHVLTTTKLVHHQKS-----SKFRHKVVRIIVTDVDATXXXXXXXXEGKFVRRVKR 733
           VKFS+H++T  K V  Q       SKF  +VVRII+TD DAT        +   VRRVKR
Sbjct: 16  VKFSQHIVTKNKHVPEQNENSNFHSKFLQRVVRIILTDADATDSSDDEGQDT--VRRVKR 73

Query: 732 HVREIDIKLQQQEVKLVLGTEXXXXXXXXXXKLPVPTXXXXXXXXXXXXXXXQ--RKKYR 559
           HV EI++                         +P P                   RKK+R
Sbjct: 74  HVTEINL-------------------------MPSPNLICEKKRRLVSPDTDVTRRKKFR 108

Query: 558 GVRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPTT--- 388
           GVRQRPWGRWAAEIRDPT  KR+WLGT++T EEAA  YD AA+ LKG +A+TNFP     
Sbjct: 109 GVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAIVYDAAAVKLKGPDAVTNFPKVLTA 168

Query: 387 --PPDHFYSKSASASEEDVSVKSPTSVL-NGDFFPFSPFTYGDAADMFGFDFELPLTLPD 217
                   +     SE D ++ SPTSVL N DF P     + +  D FGFD +    LP+
Sbjct: 169 DITEMESVTDRGEKSENDFAL-SPTSVLRNDDFTPSDDLGFCE-VDAFGFDVDSLFRLPE 226

Query: 216 IELPKRYAAVGEEEFGEFDVDYFSVE 139
             L ++Y     +EFGEFD D F++E
Sbjct: 227 FGLSEKYYG---DEFGEFDFDDFALE 249


>ref|XP_003544338.1| PREDICTED: pathogenesis-related genes transcriptional activator
           PTI6-like [Glycine max]
          Length = 282

 Score =  145 bits (365), Expect = 3e-32
 Identities = 99/250 (39%), Positives = 128/250 (51%), Gaps = 19/250 (7%)
 Frame = -3

Query: 840 SKFRHKVVRIIVTDVDATXXXXXXXXEGKF---VRRVKRHVREIDIKLQQQEVKLVLGTE 670
           +K + +++RII+TD DAT        + +     RRV R + +I+++L          + 
Sbjct: 31  TKTQRRLLRIIITDHDATDSDSSDEEQQQQQQKTRRVNREITQINMQLPLSHNSSFSPSS 90

Query: 669 XXXXXXXXXXKLPVPTXXXXXXXXXXXXXXXQRKKYRGVRQRPWGRWAAEIRDPTLRKRL 490
                     +  +                 +R K+RGVRQR WGRWAAEIRDPT RKRL
Sbjct: 91  SYYSSASTSSEQNLKCKRPNKKPPPSSAEARRRNKFRGVRQRQWGRWAAEIRDPTRRKRL 150

Query: 489 WLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPTTP----------PDHFYSKSASASEED 340
           WLGTF+TAEEAA  YD AA+ LKG NA+TNFP  P           D+  S    AS  D
Sbjct: 151 WLGTFDTAEEAATEYDRAAVKLKGPNAVTNFPLAPEATAQSPPLAADNL-SSDGGASYSD 209

Query: 339 VSVKSPTSVL--NGDFFPFSPFTYGDAADMFGFDFELPLTLPDIE----LPKRYAAVGEE 178
           + V SPTSVL    D  PF  F Y D  D FGF  + PL+LP++     L   +    EE
Sbjct: 210 L-VASPTSVLAYECDSTPFDGFRYLD-VDAFGFHIDAPLSLPEVNVNVALTCHHGKKQEE 267

Query: 177 EFGEFDVDYF 148
            F EFD+D F
Sbjct: 268 AFDEFDLDEF 277


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