BLASTX nr result

ID: Coptis25_contig00012588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012588
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251...   141   9e-41
ref|XP_002523498.1| ATP binding protein, putative [Ricinus commu...   143   9e-41
emb|CBI36522.3| unnamed protein product [Vitis vinifera]              141   9e-41
ref|XP_002864546.1| hypothetical protein ARALYDRAFT_495910 [Arab...   128   4e-38
ref|NP_200612.2| FIP1 [V]-like protein [Arabidopsis thaliana] gi...   125   3e-37

>ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251960 [Vitis vinifera]
          Length = 1417

 Score =  141 bits (356), Expect(2) = 9e-41
 Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 5/99 (5%)
 Frame = +1

Query: 202 PPINVGPIGGRGRGDWRLTGLKVSPGMQNPFHS-----AWPNTSAGRGFGSGFKFTLPSH 366
           P  N+GP+ GRGRGDWR  G+K +P MQ  FHS     AW    AGRGFG G +FTLPSH
Sbjct: 352 PLANIGPVPGRGRGDWRPAGIKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSH 411

Query: 367 KTVFDIDIESFEYKPWRHPGADLSNFFNFELKEENWKDY 483
           KT+FD+DI+SFE KPWRHPG D+S+FFNF   EE+WK Y
Sbjct: 412 KTIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQY 450



 Score = 50.4 bits (119), Expect(2) = 9e-41
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = +2

Query: 26  DGERKEAGENGKANGGVVSTGGTRIGYNNHMYHPHHSQFKQWSP 157
           DGERKE  +  K NG +   G  +IGY++H YHP HSQFK   P
Sbjct: 289 DGERKEGADAAKVNGAIA--GPPKIGYSSHGYHPFHSQFKYVRP 330


>ref|XP_002523498.1| ATP binding protein, putative [Ricinus communis]
           gi|223537205|gb|EEF38837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1365

 Score =  143 bits (361), Expect(2) = 9e-41
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 4/98 (4%)
 Frame = +1

Query: 202 PPINVGPIGGRGRGDWRLTGLKVSPGMQNPFHSA----WPNTSAGRGFGSGFKFTLPSHK 369
           PPIN+ PI GRGRGDWR  G+K  P MQ  +H      W N  AGRGFG G +FTLPSHK
Sbjct: 307 PPINMAPIAGRGRGDWRPAGMKNGPPMQKGYHPGFGMPWGNNMAGRGFGGGLEFTLPSHK 366

Query: 370 TVFDIDIESFEYKPWRHPGADLSNFFNFELKEENWKDY 483
           T+FD+DI+SFE KPW++PG D+S+FFNF L EE+WKDY
Sbjct: 367 TIFDVDIDSFEEKPWKYPGVDMSDFFNFGLNEESWKDY 404



 Score = 48.5 bits (114), Expect(2) = 9e-41
 Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +2

Query: 11  ATQGSDGERKEAG-ENGKANGGVVSTGGTRIGYNNHMY-HPHHSQFKQWSP 157
           A  G++GERKE G E     GG V   G +IGY+NH+Y HP HSQFK   P
Sbjct: 236 AATGAEGERKEGGGETAGGKGGNV-IAGPKIGYSNHVYHHPFHSQFKYVRP 285


>emb|CBI36522.3| unnamed protein product [Vitis vinifera]
          Length = 824

 Score =  141 bits (356), Expect(2) = 9e-41
 Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 5/99 (5%)
 Frame = +1

Query: 202 PPINVGPIGGRGRGDWRLTGLKVSPGMQNPFHS-----AWPNTSAGRGFGSGFKFTLPSH 366
           P  N+GP+ GRGRGDWR  G+K +P MQ  FHS     AW    AGRGFG G +FTLPSH
Sbjct: 283 PLANIGPVPGRGRGDWRPAGIKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSH 342

Query: 367 KTVFDIDIESFEYKPWRHPGADLSNFFNFELKEENWKDY 483
           KT+FD+DI+SFE KPWRHPG D+S+FFNF   EE+WK Y
Sbjct: 343 KTIFDVDIDSFEEKPWRHPGVDISDFFNFGFNEESWKQY 381



 Score = 50.4 bits (119), Expect(2) = 9e-41
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = +2

Query: 26  DGERKEAGENGKANGGVVSTGGTRIGYNNHMYHPHHSQFKQWSP 157
           DGERKE  +  K NG +   G  +IGY++H YHP HSQFK   P
Sbjct: 220 DGERKEGADAAKVNGAIA--GPPKIGYSSHGYHPFHSQFKYVRP 261


>ref|XP_002864546.1| hypothetical protein ARALYDRAFT_495910 [Arabidopsis lyrata subsp.
           lyrata] gi|297310381|gb|EFH40805.1| hypothetical protein
           ARALYDRAFT_495910 [Arabidopsis lyrata subsp. lyrata]
          Length = 1205

 Score =  128 bits (321), Expect(2) = 4e-38
 Identities = 54/94 (57%), Positives = 70/94 (74%)
 Frame = +1

Query: 202 PPINVGPIGGRGRGDWRLTGLKVSPGMQNPFHSAWPNTSAGRGFGSGFKFTLPSHKTVFD 381
           PP N+GP+ GRGRGDWR  G++ +   Q  FH  W + +AGRG      FTLPSHKT+F+
Sbjct: 285 PPANLGPLAGRGRGDWRPLGMRNASAAQKGFHQPWGSNTAGRGLD----FTLPSHKTIFE 340

Query: 382 IDIESFEYKPWRHPGADLSNFFNFELKEENWKDY 483
           +DIESFE KPWR+PG D++++FNF L EE+WKDY
Sbjct: 341 VDIESFEEKPWRYPGVDMTDYFNFGLNEESWKDY 374



 Score = 55.1 bits (131), Expect(2) = 4e-38
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +2

Query: 5   DDATQGSDGERKEAGENGKANGGVVSTGGTRIGYNNHMYHPHHSQFKQWSP 157
           +D  QG +G+ K+ GE GK +G   +TG  + GY++H YHP HSQFK   P
Sbjct: 213 EDGLQGIEGDGKDGGEAGKGSGPGGATGPPKAGYSSHGYHPFHSQFKYVRP 263


>ref|NP_200612.2| FIP1 [V]-like protein [Arabidopsis thaliana]
           gi|332009607|gb|AED96990.1| FIP1 [V]-like protein
           [Arabidopsis thaliana]
          Length = 1196

 Score =  125 bits (313), Expect(2) = 3e-37
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = +1

Query: 202 PPINVGPIGGRGRGDWRLTGLKVSPGMQNPFHSAWPNTSAGRGFGSGFKFTLPSHKTVFD 381
           PP N+GP+ GRGRGDWR  G++ +   Q  FH  W + +AGRG      FTLPSHKT+F+
Sbjct: 282 PPANLGPMAGRGRGDWRPLGMRNASAAQKGFHQPWGSNTAGRGLD----FTLPSHKTIFE 337

Query: 382 IDIESFEYKPWRHPGADLSNFFNFELKEENWKDY 483
           +DI+SFE KPWR+PG +++++FNF L EE+WKDY
Sbjct: 338 VDIDSFEEKPWRYPGVEMTDYFNFGLNEESWKDY 371



 Score = 55.1 bits (131), Expect(2) = 3e-37
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +2

Query: 5   DDATQGSDGERKEAGENGKANGGVVSTGGTRIGYNNHMYHPHHSQFKQWSP 157
           +D  QG +G+ K+ GE GK +G   +TG  + GY++H YHP HSQFK   P
Sbjct: 210 EDGLQGIEGDGKDGGEAGKGSGPGGATGPPKAGYSSHGYHPFHSQFKYVRP 260


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