BLASTX nr result

ID: Coptis25_contig00012587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012587
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523498.1| ATP binding protein, putative [Ricinus commu...   166   2e-39
ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251...   164   7e-39
emb|CBI36522.3| unnamed protein product [Vitis vinifera]              164   7e-39
ref|XP_002864546.1| hypothetical protein ARALYDRAFT_495910 [Arab...   156   2e-36
ref|NP_200612.2| FIP1 [V]-like protein [Arabidopsis thaliana] gi...   153   2e-35

>ref|XP_002523498.1| ATP binding protein, putative [Ricinus communis]
           gi|223537205|gb|EEF38837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1365

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/157 (51%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
 Frame = +2

Query: 2   GENGKANGGVVSTGGTRIGYNNHMYH-PHHSQFKYXXXXXXXXXXXXXXXXXXXXXQVRP 178
           GE     GG V   G +IGY+NH+YH P HSQFKY                     QVRP
Sbjct: 249 GETAGGKGGNV-IAGPKIGYSNHVYHHPFHSQFKYVRPGAAPIPGATTAGPGGAPGQVRP 307

Query: 179 PINMGPIGGRGRGDWRPTGLKIAPGMQKPFHSA----WPNTSAGRGFGSGFEFTLPPHKT 346
           PINM PI GRGRGDWRP G+K  P MQK +H      W N  AGRGFG G EFTLP HKT
Sbjct: 308 PINMAPIAGRGRGDWRPAGMKNGPPMQKGYHPGFGMPWGNNMAGRGFGGGLEFTLPSHKT 367

Query: 347 VFDIDIESFEDKPWRHPGADLSXXXXXXXXXXXWKDY 457
           +FD+DI+SFE+KPW++PG D+S           WKDY
Sbjct: 368 IFDVDIDSFEEKPWKYPGVDMSDFFNFGLNEESWKDY 404


>ref|XP_002276238.2| PREDICTED: uncharacterized protein LOC100251960 [Vitis vinifera]
          Length = 1417

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/153 (51%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
 Frame = +2

Query: 14  KANGGVVSTGGTRIGYNNHMYHPHHSQFKYXXXXXXXXXXXXXXXXXXXXXQVRPPINMG 193
           K NG +   G  +IGY++H YHP HSQFKY                     QVRP  N+G
Sbjct: 300 KVNGAIA--GPPKIGYSSHGYHPFHSQFKYVRPGAAPIPGAAAVVPGGTPGQVRPLANIG 357

Query: 194 PIGGRGRGDWRPTGLKIAPGMQKPFHS-----AWPNTSAGRGFGSGFEFTLPPHKTVFDI 358
           P+ GRGRGDWRP G+K AP MQK FHS     AW    AGRGFG G EFTLP HKT+FD+
Sbjct: 358 PVPGRGRGDWRPAGIKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSHKTIFDV 417

Query: 359 DIESFEDKPWRHPGADLSXXXXXXXXXXXWKDY 457
           DI+SFE+KPWRHPG D+S           WK Y
Sbjct: 418 DIDSFEEKPWRHPGVDISDFFNFGFNEESWKQY 450


>emb|CBI36522.3| unnamed protein product [Vitis vinifera]
          Length = 824

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/153 (51%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
 Frame = +2

Query: 14  KANGGVVSTGGTRIGYNNHMYHPHHSQFKYXXXXXXXXXXXXXXXXXXXXXQVRPPINMG 193
           K NG +   G  +IGY++H YHP HSQFKY                     QVRP  N+G
Sbjct: 231 KVNGAIA--GPPKIGYSSHGYHPFHSQFKYVRPGAAPIPGAAAVVPGGTPGQVRPLANIG 288

Query: 194 PIGGRGRGDWRPTGLKIAPGMQKPFHS-----AWPNTSAGRGFGSGFEFTLPPHKTVFDI 358
           P+ GRGRGDWRP G+K AP MQK FHS     AW    AGRGFG G EFTLP HKT+FD+
Sbjct: 289 PVPGRGRGDWRPAGIKNAPPMQKNFHSGFGAPAWGGNMAGRGFGGGLEFTLPSHKTIFDV 348

Query: 359 DIESFEDKPWRHPGADLSXXXXXXXXXXXWKDY 457
           DI+SFE+KPWRHPG D+S           WK Y
Sbjct: 349 DIDSFEEKPWRHPGVDISDFFNFGFNEESWKQY 381


>ref|XP_002864546.1| hypothetical protein ARALYDRAFT_495910 [Arabidopsis lyrata subsp.
           lyrata] gi|297310381|gb|EFH40805.1| hypothetical protein
           ARALYDRAFT_495910 [Arabidopsis lyrata subsp. lyrata]
          Length = 1205

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/152 (47%), Positives = 91/152 (59%)
 Frame = +2

Query: 2   GENGKANGGVVSTGGTRIGYNNHMYHPHHSQFKYXXXXXXXXXXXXXXXXXXXXXQVRPP 181
           GE GK +G   +TG  + GY++H YHP HSQFKY                     QVRPP
Sbjct: 227 GEAGKGSGPGGATGPPKAGYSSHGYHPFHSQFKYVRPGAAPIPGGAASVGGTSSGQVRPP 286

Query: 182 INMGPIGGRGRGDWRPTGLKIAPGMQKPFHSAWPNTSAGRGFGSGFEFTLPPHKTVFDID 361
            N+GP+ GRGRGDWRP G++ A   QK FH  W + +AGR    G +FTLP HKT+F++D
Sbjct: 287 ANLGPLAGRGRGDWRPLGMRNASAAQKGFHQPWGSNTAGR----GLDFTLPSHKTIFEVD 342

Query: 362 IESFEDKPWRHPGADLSXXXXXXXXXXXWKDY 457
           IESFE+KPWR+PG D++           WKDY
Sbjct: 343 IESFEEKPWRYPGVDMTDYFNFGLNEESWKDY 374


>ref|NP_200612.2| FIP1 [V]-like protein [Arabidopsis thaliana]
           gi|332009607|gb|AED96990.1| FIP1 [V]-like protein
           [Arabidopsis thaliana]
          Length = 1196

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/152 (46%), Positives = 91/152 (59%)
 Frame = +2

Query: 2   GENGKANGGVVSTGGTRIGYNNHMYHPHHSQFKYXXXXXXXXXXXXXXXXXXXXXQVRPP 181
           GE GK +G   +TG  + GY++H YHP HSQFKY                     QVRPP
Sbjct: 224 GEAGKGSGPGGATGPPKAGYSSHGYHPFHSQFKYVRPGAAPIPGGAASVGGPSSGQVRPP 283

Query: 182 INMGPIGGRGRGDWRPTGLKIAPGMQKPFHSAWPNTSAGRGFGSGFEFTLPPHKTVFDID 361
            N+GP+ GRGRGDWRP G++ A   QK FH  W + +AGR    G +FTLP HKT+F++D
Sbjct: 284 ANLGPMAGRGRGDWRPLGMRNASAAQKGFHQPWGSNTAGR----GLDFTLPSHKTIFEVD 339

Query: 362 IESFEDKPWRHPGADLSXXXXXXXXXXXWKDY 457
           I+SFE+KPWR+PG +++           WKDY
Sbjct: 340 IDSFEEKPWRYPGVEMTDYFNFGLNEESWKDY 371


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