BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012585
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group] g...   115   3e-24
gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indi...   115   3e-24
ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [S...   114   1e-23
ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat...   112   2e-23

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/110 (63%), Positives = 87/110 (79%)
 Frame = -2

Query: 332 VSALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVE 153
           VS LP+CT+MG+ R GKEIHGY T+ GLG  VSVGNS+IDMY KCG+LE G  VF QM+ 
Sbjct: 439 VSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMV 498

Query: 152 KDIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACSH 3
           +++ TYNT+I+A G+HG+GE+ L F+ QM E   RP KVTFI+LLSACSH
Sbjct: 499 RNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSH 548



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/108 (31%), Positives = 60/108 (55%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           S LP   K+   + GKE+H +  + GL S V VG+++I MY  CG +++   +F    +K
Sbjct: 339 SVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDK 398

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           DI+ +N++I  +   G  E A   F ++  +  RP  +T +++L  C+
Sbjct: 399 DIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICT 446



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           S LP C ++ + +LG  +   A R G  S + V N++IDMYCKCG   +   VF  MV  
Sbjct: 238 SILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYS 297

Query: 149 DIVTYNTIIAAH 114
           D+V+++T+IA +
Sbjct: 298 DVVSWSTLIAGY 309


>ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
           gi|22293699|dbj|BAC10044.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa
           Japonica Group] gi|125601219|gb|EAZ40795.1| hypothetical
           protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/110 (50%), Positives = 72/110 (65%)
 Frame = -2

Query: 332 VSALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVE 153
           VS LPLC +      GKE+H Y  +  + SV SV N+++DMYCKCG+LE    VF  M E
Sbjct: 466 VSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTE 525

Query: 152 KDIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACSH 3
           ++ VTYN +I++ G H   +QAL+FF+ M    I P KVTF+ALLS CSH
Sbjct: 526 RNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSH 575



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/108 (27%), Positives = 57/108 (52%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           + +  C + G  ++G  +HG A + G    + V N+++DMYCKCG +E    +F     K
Sbjct: 265 TVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSK 324

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           D+V+++++I  +  +G    +++ F +M    I P   T  ++L   S
Sbjct: 325 DVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLS 372



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/108 (27%), Positives = 58/108 (53%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           S LP  + +   R GKEIH ++ R GL     V +++ID+Y K G +     +F   ++K
Sbjct: 366 SILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDK 425

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           D+  +N+++A +  +G  + A      + +  ++P  VT +++L  C+
Sbjct: 426 DLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCN 473


>gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/110 (50%), Positives = 72/110 (65%)
 Frame = -2

Query: 332 VSALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVE 153
           VS LPLC +      GKE+H Y  +  + SV SV N+++DMYCKCG+LE    VF  M E
Sbjct: 461 VSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTE 520

Query: 152 KDIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACSH 3
           ++ VTYN +I++ G H   +QAL+FF+ M    I P KVTF+ALLS CSH
Sbjct: 521 RNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSH 570



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/108 (27%), Positives = 57/108 (52%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           + +  C + G  ++G  +HG A + G    + V N+++DMYCKCG +E    +F     K
Sbjct: 260 TVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSK 319

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           D+V+++++I  +  +G    +++ F +M    I P   T  ++L   S
Sbjct: 320 DVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLS 367



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/108 (27%), Positives = 58/108 (53%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           S LP  + +   R GKEIH ++ R GL     V +++ID+Y K G +     +F   ++K
Sbjct: 361 SILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDK 420

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           D+  +N+++A +  +G  + A      + +  ++P  VT +++L  C+
Sbjct: 421 DLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCN 468


>ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
           gi|241924468|gb|EER97612.1| hypothetical protein
           SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/110 (50%), Positives = 69/110 (62%)
 Frame = -2

Query: 332 VSALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVE 153
           VS LPLC +      GKE+H YA R  + S  SV N++ DMYCKCG LE    +F  M E
Sbjct: 456 VSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTE 515

Query: 152 KDIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACSH 3
           ++ VTYNT+I++ G HG  EQA   F+ M    + P KVTF+ALLS CSH
Sbjct: 516 RNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSH 565



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/108 (32%), Positives = 63/108 (58%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           + +P C K+   R G  +HG   + G+G    V N+++DMYCKC  L+  A +F  +  K
Sbjct: 255 TVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHK 314

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           D+++++TIIA H  + R   +++ F++M  S ++P   T  ++L + S
Sbjct: 315 DVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLS 362



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/108 (28%), Positives = 59/108 (54%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           S LP  +++   R GKEIH ++ R GL     + +++ID Y + G +++  +VF    + 
Sbjct: 356 SILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKN 415

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACS 6
           D+V  N++I  +  +   E AL     + +  +RP +VT +++L  C+
Sbjct: 416 DLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCN 463


>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/109 (44%), Positives = 76/109 (69%)
 Frame = -2

Query: 329 SALPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEK 150
           S L +C ++ +  LG+E+HGYA R  +   + VGN +I+MY KCG  ++G LVF  +  +
Sbjct: 415 SVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGR 474

Query: 149 DIVTYNTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSACSH 3
           D++++N++I  +G HG GE AL  FN+M  +R++P  +TF+A+LSACSH
Sbjct: 475 DLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSH 523



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/101 (28%), Positives = 57/101 (56%)
 Frame = -2

Query: 314 CTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEKDIVTY 135
           C+ +GS+ L + +H +A ++G  + + V N ++ MY K G +E    +F  M  + IV++
Sbjct: 142 CSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSW 201

Query: 134 NTIIAAHGAHGRGEQALTFFNQMNESRIRPGKVTFIALLSA 12
           NT+++ +  +     A   F +M    ++P  VT+ +LLS+
Sbjct: 202 NTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSS 242



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
 Frame = -2

Query: 323 LPLCTKMGSTRLGKEIHGYATRIGLGSVVSVGNSIIDMYCKCGYLEQGALVFGQMVEKDI 144
           L +C  M     GKEIHGY  + G    + V N++I  Y K  ++     VF ++  K++
Sbjct: 275 LSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNL 334

Query: 143 VTYNTIIAAHGAHGRGEQALTFFNQM------NESRIRPGKVTFIALLSACSH 3
           V++N +I+++   G  ++A   F  M      + S +RP  +++ A++S  ++
Sbjct: 335 VSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAY 387