BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012584
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   295   3e-77
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   290   1e-75
ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|2...   288   4e-75
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74
gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ...   285   2e-74

>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  295 bits (754), Expect = 3e-77
 Identities = 181/540 (33%), Positives = 288/540 (53%), Gaps = 36/540 (6%)
 Frame = -3

Query: 1534 NESGSDYEDEDENADFSMYMQMEPHKDKKKQSGIEIFVGGLDRKAVEEDLIKVFGAFGEI 1355
            +E   + ++  E  D       E  K+++K+   E+FVGGLD+ A E+DL KVF   GE+
Sbjct: 199  DEHAGELQEHAEMVDAEDEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEV 258

Query: 1354 KAARIVKHPITRKSKGYAFISFATSEQAKKVLAELKDGVEVKGKHAGISASQDSDTIYMG 1175
               R++ +P T+K+KG+AF+ FAT EQAK+ + ELK+ V V GK  G++ SQDSDT+++G
Sbjct: 259  TEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPV-VNGKQCGVTPSQDSDTLFLG 317

Query: 1174 NICKSWTKEQVLETLKGYGIEQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLR 995
            NICK+WTKE + E LK YG+E +ED+ L ED  +EG  RGFA++EF + SDAM AF+RL+
Sbjct: 318  NICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQ 377

Query: 994  KPDAVFGRNRSAKVAFVPS-MHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEK 818
            K D VFG +R+AKV+F  S + P +E ++QVKTV+++GL  SW+E ++++L ++YG++EK
Sbjct: 378  KRDVVFGVDRTAKVSFADSFIDPGDEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEK 437

Query: 817  VQLSRDLVNVRREDFGFVSFTSRENALACVAGINNAQVEDGD--VTVRANLAKPQYKGRL 644
            ++L+R++ + +R+DFGFV+F + + A+ C   INNA++ +G+    VRA L++P  +G+ 
Sbjct: 438  IELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEGENKAKVRARLSRPLQRGKG 497

Query: 643  GKSARGGYRVQKDGEKIEENGK-------------AKAKDGTVSXXXXXXXXXXXXXXAS 503
               +RG +R  + G      G              A+     +                 
Sbjct: 498  KHISRGDFRPGRGGPVRGVRGSWARPALRSFPGRGARGLGPRLPPAAVKRPIGFRDRRPV 557

Query: 502  IELRSAGGGKKPQGSIVERQGATAA----------SGEKGHPAQGRKCDGKSRNSGPSER 353
            + +   G    P     +R+    A             +  P + R          P  R
Sbjct: 558  MAMPPRGRPLPPPSRSYDRRAPVPAYPKPNLKRDYGRREEVPLRSRPAVDYGSRVAPERR 617

Query: 352  PSKKPRGHVRGRPTNGLRSQAKSFHSRQGRQAHSYGR-----APAVHSDPYARGYTTSGS 188
            PS +     RG   + +        +R+  +  +YG+      P  + +   R Y +   
Sbjct: 618  PSYRDDYATRGSGYSDIPRNTSRTAARRTYEDDAYGQRFERPPPPSYREGRPRDYDSIAG 677

Query: 187  SHQDHVYGAVADMEPHAGYLRPASVSHGRYLHDYEL-----RRADGYGTQGRGATYVGYG 23
            S +   YGA+ D+ P       ASV   R   DYE+     +  D YG +  G + +GYG
Sbjct: 678  SKRP--YGALDDVPPR---YADASVRQSRARLDYEMSAGASQYGDAYGDR-LGRSNLGYG 731


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
            gi|223534154|gb|EEF35870.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 784

 Score =  290 bits (741), Expect = 1e-75
 Identities = 187/539 (34%), Positives = 287/539 (53%), Gaps = 36/539 (6%)
 Frame = -3

Query: 1531 ESGSDYEDEDENADFSMYMQMEPH------KDKKKQSGIEIFVGGLDRKAVEEDLIKVFG 1370
            E   D E   E AD +  +  E        K+++K+   E+FVGGLD+ A E+DL KVF 
Sbjct: 175  EGEEDDEHAGEEADHAQVVNAEEEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFT 234

Query: 1369 AFGEIKAARIVKHPITRKSKGYAFISFATSEQAKKVLAELKDGVEVKGKHAGISASQDSD 1190
              GE+   R++ +P T+K+KG+AF+ F+T EQAKK + ELK+ V + GK  G++ SQDSD
Sbjct: 235  RVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKKAVTELKNPV-INGKQCGVTPSQDSD 293

Query: 1189 TIYMGNICKSWTKEQVLETLKGYGIEQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAA 1010
            T+++GNICK+WTKE + E LK YG+E +ED+ L ED  +EG  RGFA++EF + SDAM A
Sbjct: 294  TLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVEDSNNEGMNRGFAFLEFSSRSDAMDA 353

Query: 1009 FQRLRKPDAVFGRNRSAKVAFVPS-MHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQY 833
            F+RL+K D +FG +R AKV+F  S + P +E ++QVKTV+V+GL  SW+E ++++L +++
Sbjct: 354  FKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPASWDEDRVRELLKKF 413

Query: 832  GQVEKVQLSRDLVNVRREDFGFVSFTSRENALACVAGINNAQVEDGD--VTVRANLAKPQ 659
            G++EK++L+R++ + +R+DFGFV+F S + A+ C   INNA++ +GD    VRA L++P 
Sbjct: 414  GEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKSINNAELGEGDNKAKVRARLSRPL 473

Query: 658  YKGRLGKSARGGYRVQKDGEK-----IEENGKAKAKDGTVSXXXXXXXXXXXXXXASIEL 494
             +G+   ++R  +R    G       +       ++    S               S+ +
Sbjct: 474  QRGKGKHASRADFRSWYGGRTARGPWVRPVRGIASRAAPTSVKRHVGLRDRRPPVMSMPV 533

Query: 493  RS-------------AGGGKKPQGSIVERQGATAASGEKGHPAQGRKCDGKSRNSGPSER 353
            R              A     P+ S+    G      E+  P + R     S  S    R
Sbjct: 534  RGRPLPPPNRTYDRRAPAPSYPKSSLKRDYGRR----EELPPPRSRAPVDYSSRSVAERR 589

Query: 352  PSKKPRGHVRGRPTNGLRSQAKSFHSRQGRQAHSYG----RAPAVHSDPYARGYTTSGSS 185
             S +     RG   + +        +R+      YG    R P  + +  AR Y +   S
Sbjct: 590  QSYRDDYSSRGSGYSDIPRGTSRSSARRAYVDDGYGQRLERHPPSYREGRARDYDSISGS 649

Query: 184  HQDHVYGAVADMEPHAGYLRPASVSHGRYLHDYEL-----RRADGYGTQGRGATYVGYG 23
             +   Y A+ D+ P       A   H R   DYEL     +  D YG +  G + VGYG
Sbjct: 650  KRP--YSAMDDVPPRYAD-GGAGTRHSRARLDYELGPSASQYGDAYGDR-IGRSSVGYG 704


>ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|222835164|gb|EEE73599.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  288 bits (736), Expect = 4e-75
 Identities = 142/305 (46%), Positives = 218/305 (71%), Gaps = 3/305 (0%)
 Frame = -3

Query: 1522 SDYEDEDENADFSMYMQMEPHKDKKKQSGIEIFVGGLDRKAVEEDLIKVFGAFGEIKAAR 1343
            +D E+EDE+         E  K+++K+   EIFVGGLD+ A E+DL KVF   GE+  AR
Sbjct: 11   ADVEEEDEHH--------EVFKERRKRKEFEIFVGGLDKDATEDDLRKVFSRVGEVTEAR 62

Query: 1342 IVKHPITRKSKGYAFISFATSEQAKKVLAELKDGVEVKGKHAGISASQDSDTIYMGNICK 1163
            ++ +P T+K+KG+AF+ FAT EQAK+ + ELK+ V + GK  G++ SQDSDT+++GNICK
Sbjct: 63   LMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPV-INGKQCGVTPSQDSDTLFLGNICK 121

Query: 1162 SWTKEQVLETLKGYGIEQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDA 983
            +WTKE + E LK YG+E +ED+ L ED  + G  RGFA++EF + SDAM AF+RL+K D 
Sbjct: 122  TWTKEALKEKLKHYGVENVEDLTLVEDSNNLGMNRGFAFLEFSSRSDAMNAFKRLQKRDV 181

Query: 982  VFGRNRSAKVAFVPS-MHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLS 806
            +FG +R AKV+F  S + P +E ++QVKT++++GL  SW+E + + L ++YG +EK++L+
Sbjct: 182  LFGVDRPAKVSFADSFIGPGDEIMAQVKTLFIDGLPASWDEDRFRVLLKKYGNIEKIELA 241

Query: 805  RDLVNVRREDFGFVSFTSRENALACVAGINNAQVEDGD--VTVRANLAKPQYKGRLGKSA 632
            R++ + RR+DFGFV+F + + A+AC   INN ++ +GD  V VRA L++P  +G+   ++
Sbjct: 242  RNMPSARRKDFGFVTFDTHDAAVACAKSINNVELGEGDNKVKVRARLSRPLQRGKGKHAS 301

Query: 631  RGGYR 617
            RG ++
Sbjct: 302  RGDFQ 306


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  286 bits (732), Expect = 1e-74
 Identities = 139/305 (45%), Positives = 217/305 (71%), Gaps = 3/305 (0%)
 Frame = -3

Query: 1522 SDYEDEDENADFSMYMQMEPHKDKKKQSGIEIFVGGLDRKAVEEDLIKVFGAFGEIKAAR 1343
            +D E+EDE+         E  K+++K+   E+FVGGLD+ A E+DL K+F   GE+   R
Sbjct: 11   ADVEEEDEHH--------EVFKERRKRKEFEVFVGGLDKDATEDDLRKIFSRVGEVTEVR 62

Query: 1342 IVKHPITRKSKGYAFISFATSEQAKKVLAELKDGVEVKGKHAGISASQDSDTIYMGNICK 1163
            ++ +P T+K+KG+AF+ FAT EQAK+ + ELK+ V + GK  G++ SQDSDT+++GNICK
Sbjct: 63   LMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPV-INGKQCGVTPSQDSDTLFLGNICK 121

Query: 1162 SWTKEQVLETLKGYGIEQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDA 983
            +WTKE + E LK YG+E ++D+ L ED  + G  RGFA++EF + SDAM AF+RL+K D 
Sbjct: 122  TWTKEALKEKLKHYGVENVKDLTLVEDSNNAGMNRGFAFLEFSSRSDAMDAFKRLQKRDV 181

Query: 982  VFGRNRSAKVAFVPS-MHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLS 806
            +FG +R AKV+F  S + P +E ++QVKTV+++GL  SW+E +++ L ++YG++EK++L+
Sbjct: 182  LFGVDRPAKVSFADSFIDPGDEIMAQVKTVFIDGLPASWDEDRVRVLLKKYGEIEKIELA 241

Query: 805  RDLVNVRREDFGFVSFTSRENALACVAGINNAQVEDGD--VTVRANLAKPQYKGRLGKSA 632
            R++ + RR+DFGFV+F + + A+ C   INNA++ +GD    VRA L++P  +G+    +
Sbjct: 242  RNMPSARRKDFGFVTFDTHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHLS 301

Query: 631  RGGYR 617
            RG +R
Sbjct: 302  RGDFR 306


>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
          Length = 342

 Score =  285 bits (729), Expect = 2e-74
 Identities = 140/309 (45%), Positives = 218/309 (70%), Gaps = 3/309 (0%)
 Frame = -3

Query: 1519 DYEDEDENADFSMYMQMEPHKDKKKQSGIEIFVGGLDRKAVEEDLIKVFGAFGEIKAARI 1340
            D EDE+ +  F         K+++K+   E+FVGGLD+ A E+DL KVF   GE+   R+
Sbjct: 12   DAEDEEHHEVF---------KERRKRKEFEVFVGGLDKDATEDDLKKVFSQVGEVTEVRL 62

Query: 1339 VKHPITRKSKGYAFISFATSEQAKKVLAELKDGVEVKGKHAGISASQDSDTIYMGNICKS 1160
            + +P T+K+KG+AF+ FAT EQAK+ + ELK+ V V GK  G++ SQDSDT+++GNICK+
Sbjct: 63   MMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPV-VNGKQCGVTPSQDSDTLFLGNICKT 121

Query: 1159 WTKEQVLETLKGYGIEQIEDIFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDAV 980
            WTKE + E LK YG+E +ED+ L ED  +EG  RGFA++EF   SDAM AF+RL++   V
Sbjct: 122  WTKEALKEKLKHYGVENVEDLTLVEDSNNEGMNRGFAFLEFSFRSDAMDAFKRLQEERCV 181

Query: 979  FGRNRSAKVAFVPS-MHPSEEALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSR 803
            FG +R+AKV+F  S + P +E ++QVKTV+++GL  SW+E ++++L ++YG++EK++L+R
Sbjct: 182  FGVDRTAKVSFTDSFIDPGDEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELAR 241

Query: 802  DLVNVRREDFGFVSFTSRENALACVAGINNAQVEDGD--VTVRANLAKPQYKGRLGKSAR 629
            ++ + +R+DFGFV+F + + A+ C   INNA++ +G+    VRA L++P  +G+    +R
Sbjct: 242  NMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISR 301

Query: 628  GGYRVQKDG 602
            G +R  + G
Sbjct: 302  GDFRPGRGG 310