BLASTX nr result

ID: Coptis25_contig00012579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012579
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245...   177   3e-42
ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...   173   5e-41
emb|CBI23587.3| unnamed protein product [Vitis vinifera]              173   5e-41
ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...   169   9e-40
ref|XP_003521282.1| PREDICTED: uncharacterized protein LOC100817...   167   2e-39

>ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]
          Length = 230

 Score =  177 bits (448), Expect = 3e-42
 Identities = 90/181 (49%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
 Frame = +1

Query: 46  HLTKYNKKKHTEIRSLFQ---TKAAMGFKSFIGRVLFASVFLLSAWQEFNEFGVDGGPAA 216
           HL +  +++  + ++  Q    + +M F SF+GRVLFASVF+LSAWQEFNEFGVDGGPA 
Sbjct: 49  HLRERGRRQRRDSKAFHQLSCVRTSMAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAV 108

Query: 217 NNLKPKYDILAKHVYSYTGAYLPDVEIKPLVLANXXXXXXXXXXXXXXXXXXXXXLLIHL 396
            +L PK D+ +KHV +  G  +P+VEIK LV A+                     LL+H 
Sbjct: 109 ESLAPKLDVFSKHVSANVGVQVPEVEIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQ 168

Query: 397 AITTPILYDFYNYDLEKPQFGPLFIKFTENVALFGALIFFIEMKKMIRRRHPRKKVSKAK 576
           AI  PILYDFYNYD++K +F  LF+KFT+N+ALFGAL+FFI MK  + RR  +KK  K K
Sbjct: 169 AIVIPILYDFYNYDVDKKEFVVLFLKFTQNLALFGALLFFIGMKNSMPRRQLKKKAPKTK 228

Query: 577 T 579
           T
Sbjct: 229 T 229


>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  173 bits (438), Expect = 5e-41
 Identities = 87/156 (55%), Positives = 106/156 (67%)
 Frame = +1

Query: 112 MGFKSFIGRVLFASVFLLSAWQEFNEFGVDGGPAANNLKPKYDILAKHVYSYTGAYLPDV 291
           M F SF+GRVLFASVF+LSAWQEFN+FGVDGGPAA +  PK+++ ++HV S TG  +P V
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 292 EIKPLVLANXXXXXXXXXXXXXXXXXXXXXLLIHLAITTPILYDFYNYDLEKPQFGPLFI 471
           EIK LV A                      LL+H A+ TPILYDFYNYD +K +F  LF 
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 472 KFTENVALFGALIFFIEMKKMIRRRHPRKKVSKAKT 579
           KFT+N+ALFGAL+FFI MK  I RR  +KK  K+KT
Sbjct: 121 KFTQNLALFGALLFFIGMKNSIPRRQLKKKTPKSKT 156


>emb|CBI23587.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  173 bits (438), Expect = 5e-41
 Identities = 87/156 (55%), Positives = 106/156 (67%)
 Frame = +1

Query: 112 MGFKSFIGRVLFASVFLLSAWQEFNEFGVDGGPAANNLKPKYDILAKHVYSYTGAYLPDV 291
           M F SF+GRVLFASVF+LSAWQEFNEFGVDGGPA  +L PK D+ +KHV +  G  +P+V
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 292 EIKPLVLANXXXXXXXXXXXXXXXXXXXXXLLIHLAITTPILYDFYNYDLEKPQFGPLFI 471
           EIK LV A+                     LL+H AI  PILYDFYNYD++K +F  LF+
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 472 KFTENVALFGALIFFIEMKKMIRRRHPRKKVSKAKT 579
           KFT+N+ALFGAL+FFI MK  + RR  +KK  K KT
Sbjct: 121 KFTQNLALFGALLFFIGMKNSMPRRQLKKKAPKTKT 156


>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  169 bits (427), Expect = 9e-40
 Identities = 86/156 (55%), Positives = 103/156 (66%)
 Frame = +1

Query: 112 MGFKSFIGRVLFASVFLLSAWQEFNEFGVDGGPAANNLKPKYDILAKHVYSYTGAYLPDV 291
           M F SF+GRVLFASVF+LSA+QEFNEFGVDGGPAA  LKPK+ +   HV S+ G  +P++
Sbjct: 1   MAFTSFLGRVLFASVFILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 292 EIKPLVLANXXXXXXXXXXXXXXXXXXXXXLLIHLAITTPILYDFYNYDLEKPQFGPLFI 471
           EIK LV A                      L+IH  I  PILYDFYNYD E+ +F  LFI
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 472 KFTENVALFGALIFFIEMKKMIRRRHPRKKVSKAKT 579
           KFT+N+AL+GAL+FFI MK    RR  +KKV K KT
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQHKKKVPKTKT 156


>ref|XP_003521282.1| PREDICTED: uncharacterized protein LOC100817488 isoform 1 [Glycine
           max]
          Length = 157

 Score =  167 bits (424), Expect = 2e-39
 Identities = 86/157 (54%), Positives = 104/157 (66%)
 Frame = +1

Query: 112 MGFKSFIGRVLFASVFLLSAWQEFNEFGVDGGPAANNLKPKYDILAKHVYSYTGAYLPDV 291
           M F SF+GRVLFASVF+LSA+QEFN +GVDGGPAA  L+PK+D  A  V+S  G  LPD+
Sbjct: 1   MAFSSFLGRVLFASVFILSAYQEFNSYGVDGGPAAKALRPKFDAFAHQVHSKVGFQLPDI 60

Query: 292 EIKPLVLANXXXXXXXXXXXXXXXXXXXXXLLIHLAITTPILYDFYNYDLEKPQFGPLFI 471
           ++K LV                        LL+H  ITTPILYDFYNY  E  +F  LFI
Sbjct: 61  DMKFLVAGAIALKGLGGILFILSSSFGAFLLLLHQVITTPILYDFYNYHSEDKEFIQLFI 120

Query: 472 KFTENVALFGALIFFIEMKKMIRRRHPRKKVSKAKTH 582
           KFT+N+ALFGAL+FFI MK  I RR P+KK +K KT+
Sbjct: 121 KFTQNMALFGALLFFIGMKNSIPRRQPKKKAAKTKTY 157


Top