BLASTX nr result
ID: Coptis25_contig00012573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012573
(716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti... 162 2e-56
ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis... 155 1e-54
emb|CBI29531.3| unnamed protein product [Vitis vinifera] 155 1e-54
ref|XP_002534264.1| microtubule associated protein xmap215, puta... 156 2e-54
ref|XP_002317062.1| microtubule organization protein [Populus tr... 158 3e-54
>dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
Length = 2029
Score = 162 bits (410), Expect(2) = 2e-56
Identities = 103/214 (48%), Positives = 131/214 (61%), Gaps = 15/214 (7%)
Frame = +2
Query: 2 QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
QSVEGMK +CH L VATNDPE +A+D+++KD DKLV CLA KV +TFDF L G SSRS K
Sbjct: 1489 QSVEGMKVVCHLLAVATNDPEGSAMDDIVKDADKLVSCLANKVARTFDFSLMGASSRSCK 1548
Query: 182 YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
YVLNTLM+ L + L ++ +P + +L + N+L
Sbjct: 1549 YVLNTLMQTFQNRTLAHAVRESTLDILITELLLWLLDERVP----RMDDGSQLLKALNVL 1604
Query: 320 MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
ML+ A S +F + + ++ DPSRWPSPA+ ES+V N KFS
Sbjct: 1605 MLKILDNADRTS-------------SFVVLIKL-LRPLDPSRWPSPATDESLVIRNQKFS 1650
Query: 500 DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
DLVVKCLIKLTKVLQSTI++VDLDRIL++ IYL
Sbjct: 1651 DLVVKCLIKLTKVLQSTIYDVDLDRILQSIHIYL 1684
Score = 83.2 bits (204), Expect(2) = 2e-56
Identities = 39/45 (86%), Positives = 44/45 (97%)
Frame = +1
Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
QSIH+++QELGM+EIR+RAGADDKPLRMVKTVLHEL KLRGTAIK
Sbjct: 1678 QSIHIYLQELGMDEIRRRAGADDKPLRMVKTVLHELVKLRGTAIK 1722
>ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
Length = 1007
Score = 155 bits (393), Expect(2) = 1e-54
Identities = 100/214 (46%), Positives = 126/214 (58%), Gaps = 15/214 (7%)
Frame = +2
Query: 2 QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
QSVEGMK +CHEL AT+DPE +A+D+++KD D+LV CLA KV KTFDF L G SSRS K
Sbjct: 464 QSVEGMKVVCHELAQATSDPEGSAMDDILKDADRLVSCLANKVAKTFDFSLTGASSRSCK 523
Query: 182 YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
YVLNTLM+ L + L ++ +P +L + N+L
Sbjct: 524 YVLNTLMQTFQNKKLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 579
Query: 320 MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
ML+ A A+F + ++ D SRWPSPAS E+ A N KFS
Sbjct: 580 MLKILDNAERT-------------ASFVVLINL-LRPLDASRWPSPASNENFAARNQKFS 625
Query: 500 DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
DLVVKCLIKLTKVLQSTI +VDLDRIL++ +YL
Sbjct: 626 DLVVKCLIKLTKVLQSTIFDVDLDRILQSIHVYL 659
Score = 84.0 bits (206), Expect(2) = 1e-54
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +1
Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
QSIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRGTAIK
Sbjct: 653 QSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGTAIK 697
>emb|CBI29531.3| unnamed protein product [Vitis vinifera]
Length = 991
Score = 155 bits (393), Expect(2) = 1e-54
Identities = 100/214 (46%), Positives = 126/214 (58%), Gaps = 15/214 (7%)
Frame = +2
Query: 2 QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
QSVEGMK +CHEL AT+DPE +A+D+++KD D+LV CLA KV KTFDF L G SSRS K
Sbjct: 448 QSVEGMKVVCHELAQATSDPEGSAMDDILKDADRLVSCLANKVAKTFDFSLTGASSRSCK 507
Query: 182 YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
YVLNTLM+ L + L ++ +P +L + N+L
Sbjct: 508 YVLNTLMQTFQNKKLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 563
Query: 320 MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
ML+ A A+F + ++ D SRWPSPAS E+ A N KFS
Sbjct: 564 MLKILDNAERT-------------ASFVVLINL-LRPLDASRWPSPASNENFAARNQKFS 609
Query: 500 DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
DLVVKCLIKLTKVLQSTI +VDLDRIL++ +YL
Sbjct: 610 DLVVKCLIKLTKVLQSTIFDVDLDRILQSIHVYL 643
Score = 84.0 bits (206), Expect(2) = 1e-54
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +1
Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
QSIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRGTAIK
Sbjct: 637 QSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGTAIK 681
>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
gi|223525620|gb|EEF28119.1| microtubule associated
protein xmap215, putative [Ricinus communis]
Length = 1992
Score = 156 bits (395), Expect(2) = 2e-54
Identities = 101/214 (47%), Positives = 125/214 (58%), Gaps = 15/214 (7%)
Frame = +2
Query: 2 QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
QSVEGMK +CHEL AT DPE +A+D L+KD D+LV CLA KV KTFDF L G SSRS K
Sbjct: 1454 QSVEGMKVVCHELAQATGDPEGSAMDELVKDADRLVSCLASKVAKTFDFSLTGASSRSCK 1513
Query: 182 YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
YVLNTLM+ L + L ++ +P +L + N+L
Sbjct: 1514 YVLNTLMQTFQNKRLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 1569
Query: 320 MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
ML+ A S +F + ++ DPSRWPS AS+E+ N KFS
Sbjct: 1570 MLKILDNADRTS-------------SFVVLINL-LRPVDPSRWPSSASSETFAIRNQKFS 1615
Query: 500 DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
DLVVKCLIKLTKVLQSTI++VDLDRIL++ IYL
Sbjct: 1616 DLVVKCLIKLTKVLQSTIYDVDLDRILQSIHIYL 1649
Score = 82.4 bits (202), Expect(2) = 2e-54
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +1
Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
QSIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRG AIK
Sbjct: 1643 QSIHIYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIK 1687
>ref|XP_002317062.1| microtubule organization protein [Populus trichocarpa]
gi|222860127|gb|EEE97674.1| microtubule organization
protein [Populus trichocarpa]
Length = 2025
Score = 158 bits (400), Expect(2) = 3e-54
Identities = 101/214 (47%), Positives = 126/214 (58%), Gaps = 15/214 (7%)
Frame = +2
Query: 2 QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
QSVEGMK +CHEL AT+D E + +D L+KD D+LV CLA KV +TFDF L G SSRS K
Sbjct: 1491 QSVEGMKVVCHELAQATSDEEGSVMDELVKDADRLVSCLANKVARTFDFSLTGASSRSCK 1550
Query: 182 YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
YVLNTLM+ L + L ++ +P +L + N+L
Sbjct: 1551 YVLNTLMQTFQNKTLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 1606
Query: 320 MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
ML+ A S +F+ + ++ DPSRWPSPASTE+ N KFS
Sbjct: 1607 MLKILDNADRTS-------------SFDVLINL-LRPLDPSRWPSPASTETFAIRNQKFS 1652
Query: 500 DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
DLVVKCLIKLTKVLQSTI++VDLDRILR+ IYL
Sbjct: 1653 DLVVKCLIKLTKVLQSTIYDVDLDRILRSIHIYL 1686
Score = 79.7 bits (195), Expect(2) = 3e-54
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = +1
Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
+SIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRG +IK
Sbjct: 1680 RSIHIYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGASIK 1724