BLASTX nr result

ID: Coptis25_contig00012573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012573
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti...   162   2e-56
ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis...   155   1e-54
emb|CBI29531.3| unnamed protein product [Vitis vinifera]              155   1e-54
ref|XP_002534264.1| microtubule associated protein xmap215, puta...   156   2e-54
ref|XP_002317062.1| microtubule organization protein [Populus tr...   158   3e-54

>dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
          Length = 2029

 Score =  162 bits (410), Expect(2) = 2e-56
 Identities = 103/214 (48%), Positives = 131/214 (61%), Gaps = 15/214 (7%)
 Frame = +2

Query: 2    QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
            QSVEGMK +CH L VATNDPE +A+D+++KD DKLV CLA KV +TFDF L G SSRS K
Sbjct: 1489 QSVEGMKVVCHLLAVATNDPEGSAMDDIVKDADKLVSCLANKVARTFDFSLMGASSRSCK 1548

Query: 182  YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
            YVLNTLM+               L    +   L ++   +P    +     +L +  N+L
Sbjct: 1549 YVLNTLMQTFQNRTLAHAVRESTLDILITELLLWLLDERVP----RMDDGSQLLKALNVL 1604

Query: 320  MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
            ML+    A   S             +F  + +  ++  DPSRWPSPA+ ES+V  N KFS
Sbjct: 1605 MLKILDNADRTS-------------SFVVLIKL-LRPLDPSRWPSPATDESLVIRNQKFS 1650

Query: 500  DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
            DLVVKCLIKLTKVLQSTI++VDLDRIL++  IYL
Sbjct: 1651 DLVVKCLIKLTKVLQSTIYDVDLDRILQSIHIYL 1684



 Score = 83.2 bits (204), Expect(2) = 2e-56
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = +1

Query: 580  QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
            QSIH+++QELGM+EIR+RAGADDKPLRMVKTVLHEL KLRGTAIK
Sbjct: 1678 QSIHIYLQELGMDEIRRRAGADDKPLRMVKTVLHELVKLRGTAIK 1722


>ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
          Length = 1007

 Score =  155 bits (393), Expect(2) = 1e-54
 Identities = 100/214 (46%), Positives = 126/214 (58%), Gaps = 15/214 (7%)
 Frame = +2

Query: 2    QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
            QSVEGMK +CHEL  AT+DPE +A+D+++KD D+LV CLA KV KTFDF L G SSRS K
Sbjct: 464  QSVEGMKVVCHELAQATSDPEGSAMDDILKDADRLVSCLANKVAKTFDFSLTGASSRSCK 523

Query: 182  YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
            YVLNTLM+               L    +   L ++   +P          +L +  N+L
Sbjct: 524  YVLNTLMQTFQNKKLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 579

Query: 320  MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
            ML+    A                A+F  +    ++  D SRWPSPAS E+  A N KFS
Sbjct: 580  MLKILDNAERT-------------ASFVVLINL-LRPLDASRWPSPASNENFAARNQKFS 625

Query: 500  DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
            DLVVKCLIKLTKVLQSTI +VDLDRIL++  +YL
Sbjct: 626  DLVVKCLIKLTKVLQSTIFDVDLDRILQSIHVYL 659



 Score = 84.0 bits (206), Expect(2) = 1e-54
 Identities = 40/45 (88%), Positives = 44/45 (97%)
 Frame = +1

Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
           QSIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRGTAIK
Sbjct: 653 QSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGTAIK 697


>emb|CBI29531.3| unnamed protein product [Vitis vinifera]
          Length = 991

 Score =  155 bits (393), Expect(2) = 1e-54
 Identities = 100/214 (46%), Positives = 126/214 (58%), Gaps = 15/214 (7%)
 Frame = +2

Query: 2    QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
            QSVEGMK +CHEL  AT+DPE +A+D+++KD D+LV CLA KV KTFDF L G SSRS K
Sbjct: 448  QSVEGMKVVCHELAQATSDPEGSAMDDILKDADRLVSCLANKVAKTFDFSLTGASSRSCK 507

Query: 182  YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
            YVLNTLM+               L    +   L ++   +P          +L +  N+L
Sbjct: 508  YVLNTLMQTFQNKKLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 563

Query: 320  MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
            ML+    A                A+F  +    ++  D SRWPSPAS E+  A N KFS
Sbjct: 564  MLKILDNAERT-------------ASFVVLINL-LRPLDASRWPSPASNENFAARNQKFS 609

Query: 500  DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
            DLVVKCLIKLTKVLQSTI +VDLDRIL++  +YL
Sbjct: 610  DLVVKCLIKLTKVLQSTIFDVDLDRILQSIHVYL 643



 Score = 84.0 bits (206), Expect(2) = 1e-54
 Identities = 40/45 (88%), Positives = 44/45 (97%)
 Frame = +1

Query: 580 QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
           QSIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRGTAIK
Sbjct: 637 QSIHVYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGTAIK 681


>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
            gi|223525620|gb|EEF28119.1| microtubule associated
            protein xmap215, putative [Ricinus communis]
          Length = 1992

 Score =  156 bits (395), Expect(2) = 2e-54
 Identities = 101/214 (47%), Positives = 125/214 (58%), Gaps = 15/214 (7%)
 Frame = +2

Query: 2    QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
            QSVEGMK +CHEL  AT DPE +A+D L+KD D+LV CLA KV KTFDF L G SSRS K
Sbjct: 1454 QSVEGMKVVCHELAQATGDPEGSAMDELVKDADRLVSCLASKVAKTFDFSLTGASSRSCK 1513

Query: 182  YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
            YVLNTLM+               L    +   L ++   +P          +L +  N+L
Sbjct: 1514 YVLNTLMQTFQNKRLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 1569

Query: 320  MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
            ML+    A   S             +F  +    ++  DPSRWPS AS+E+    N KFS
Sbjct: 1570 MLKILDNADRTS-------------SFVVLINL-LRPVDPSRWPSSASSETFAIRNQKFS 1615

Query: 500  DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
            DLVVKCLIKLTKVLQSTI++VDLDRIL++  IYL
Sbjct: 1616 DLVVKCLIKLTKVLQSTIYDVDLDRILQSIHIYL 1649



 Score = 82.4 bits (202), Expect(2) = 2e-54
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 580  QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
            QSIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRG AIK
Sbjct: 1643 QSIHIYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGAAIK 1687


>ref|XP_002317062.1| microtubule organization protein [Populus trichocarpa]
            gi|222860127|gb|EEE97674.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2025

 Score =  158 bits (400), Expect(2) = 3e-54
 Identities = 101/214 (47%), Positives = 126/214 (58%), Gaps = 15/214 (7%)
 Frame = +2

Query: 2    QSVEGMKAICHELGVATNDPESTAIDNLIKDTDKLVLCLAIKVPKTFDFLLAGGSSRSFK 181
            QSVEGMK +CHEL  AT+D E + +D L+KD D+LV CLA KV +TFDF L G SSRS K
Sbjct: 1491 QSVEGMKVVCHELAQATSDEEGSVMDELVKDADRLVSCLANKVARTFDFSLTGASSRSCK 1550

Query: 182  YVLNTLME--------------FLIPYFSSFFLKIIHAFIPQS*CKCCICCKLFRIKNLL 319
            YVLNTLM+               L    +   L ++   +P          +L +  N+L
Sbjct: 1551 YVLNTLMQTFQNKTLAHAVKESTLDSLITELLLWLLDERVPH----MDDGSQLLKALNVL 1606

Query: 320  MLQTHHRASALSVG*KGSLDS*WWAAFESI*RCDVKDSDPSRWPSPASTESVVAINHKFS 499
            ML+    A   S             +F+ +    ++  DPSRWPSPASTE+    N KFS
Sbjct: 1607 MLKILDNADRTS-------------SFDVLINL-LRPLDPSRWPSPASTETFAIRNQKFS 1652

Query: 500  DLVVKCLIKLTKVLQSTIHEVDLDRILRA-SIYL 598
            DLVVKCLIKLTKVLQSTI++VDLDRILR+  IYL
Sbjct: 1653 DLVVKCLIKLTKVLQSTIYDVDLDRILRSIHIYL 1686



 Score = 79.7 bits (195), Expect(2) = 3e-54
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = +1

Query: 580  QSIHLFMQELGMEEIRKRAGADDKPLRMVKTVLHELCKLRGTAIK 714
            +SIH+++QELGMEEIR+RAGADDKPLRMVKTVLHEL KLRG +IK
Sbjct: 1680 RSIHIYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGASIK 1724


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