BLASTX nr result

ID: Coptis25_contig00012553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012553
         (1794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241...    73   2e-10
emb|CBI35888.3| unnamed protein product [Vitis vinifera]               73   2e-10
ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|2...    67   5e-10
gb|EEC83164.1| hypothetical protein OsI_28387 [Oryza sativa Indi...    66   3e-08
ref|XP_002530330.1| magnesium ion binding protein, putative [Ric...    57   3e-07

>ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241207 [Vitis vinifera]
          Length = 317

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 43/103 (41%), Positives = 58/103 (56%)
 Frame = +3

Query: 1479 KTHLWYITPDELKDASLLDQYLNVLSPCEKENVLLLSGDKLQGVSF*HVHSCALLLQDVF 1658
            +TH WYI PDE+K A+LL+QYL++LSPCEKENVL + GD L+  +   + + AL+   + 
Sbjct: 32   ETHFWYILPDEVKSATLLNQYLDILSPCEKENVLRMHGDNLKKSA---LLARALVRTTIA 88

Query: 1659 TYYIFLCLF*GA*V**LILFGIGSDTNSVVSPSLFKFRKNNFG 1787
             Y I                      NS VSP+  KFRKN +G
Sbjct: 89   RYQI----------------------NSQVSPTSLKFRKNIYG 109


>emb|CBI35888.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 43/103 (41%), Positives = 58/103 (56%)
 Frame = +3

Query: 1479 KTHLWYITPDELKDASLLDQYLNVLSPCEKENVLLLSGDKLQGVSF*HVHSCALLLQDVF 1658
            +TH WYI PDE+K A+LL+QYL++LSPCEKENVL + GD L+  +   + + AL+   + 
Sbjct: 38   ETHFWYILPDEVKSATLLNQYLDILSPCEKENVLRMHGDNLKKSA---LLARALVRTTIA 94

Query: 1659 TYYIFLCLF*GA*V**LILFGIGSDTNSVVSPSLFKFRKNNFG 1787
             Y I                      NS VSP+  KFRKN +G
Sbjct: 95   RYQI----------------------NSQVSPTSLKFRKNIYG 115


>ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|222867453|gb|EEF04584.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score = 66.6 bits (161), Expect(2) = 5e-10
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = +3

Query: 1476 RKTHLWYITPDELKDASLLDQYLNVLSPCEKENVLLLSGDKLQ 1604
            R+TH+W++ PDE K  SLL+QY+ +LSPCEKENVL + GD+LQ
Sbjct: 1    RETHVWFVLPDEFKSVSLLNQYMELLSPCEKENVLSMRGDQLQ 43



 Score = 25.4 bits (54), Expect(2) = 5e-10
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 1613 ILARTLVRTTLAR 1651
            +LARTLVRTT+AR
Sbjct: 47   LLARTLVRTTIAR 59


>gb|EEC83164.1| hypothetical protein OsI_28387 [Oryza sativa Indica Group]
          Length = 321

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 36/104 (34%), Positives = 54/104 (51%)
 Frame = +3

Query: 1476 RKTHLWYITPDELKDASLLDQYLNVLSPCEKENVLLLSGDKLQGVSF*HVHSCALLLQDV 1655
            R+ H+WY+ PDEL D S LD Y+ +LSP E++N L ++G +LQ          A+L + +
Sbjct: 44   REVHVWYVCPDELNDHSHLDMYMELLSPSERKNALSMNGPRLQ--------KDAMLSRAL 95

Query: 1656 FTYYIFLCLF*GA*V**LILFGIGSDTNSVVSPSLFKFRKNNFG 1787
                +  C+                DTNS + P  F+F+KN FG
Sbjct: 96   LRTTLSRCIL---------------DTNSKIDPRSFEFKKNKFG 124


>ref|XP_002530330.1| magnesium ion binding protein, putative [Ricinus communis]
            gi|223530134|gb|EEF32046.1| magnesium ion binding
            protein, putative [Ricinus communis]
          Length = 315

 Score = 56.6 bits (135), Expect(2) = 3e-07
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = +3

Query: 1479 KTHLWYITPDELKDASLLDQYLNVLSPCEKENVLLLSGDKLQ 1604
            +TH WYI PDE+K  SLL++Y+ +LSP EK+NVL +  D+L+
Sbjct: 26   ETHFWYIIPDEVKSISLLNKYMEILSPVEKQNVLCMPDDQLR 67



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +2

Query: 1613 ILARTLVRTTLAR 1651
            ILARTLVRTT+AR
Sbjct: 71   ILARTLVRTTIAR 83


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