BLASTX nr result

ID: Coptis25_contig00012546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012546
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera]   281   2e-73
ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265...   280   4e-73
ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|2...   268   1e-69
ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68
ref|XP_003552937.1| PREDICTED: uncharacterized protein LOC100810...   263   6e-68

>emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera]
          Length = 231

 Score =  281 bits (718), Expect = 2e-73
 Identities = 139/177 (78%), Positives = 148/177 (83%), Gaps = 1/177 (0%)
 Frame = +1

Query: 202 MDSISGGGSTDMNITEGSSAATXXXXXXXXXXXXXPLSRYESQKRRDWNTFLQYLKNHKP 381
           MDS SGGG+ D +  EG SA               P SRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSASGGGAADPSSGEGPSAG--GGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKP 58

Query: 382 PLSLARCSGAHVIEFLKYLDQFGKTKVHLLGCAYYGHPNPQAPCPCPLKQAWGSLDALIG 561
           PL+LARCSGAHVIEFLKYLDQFGKTKVH+ GC Y+GHPNP APC CPLKQAWGSLDALIG
Sbjct: 59  PLTLARCSGAHVIEFLKYLDQFGKTKVHISGCPYFGHPNPPAPCACPLKQAWGSLDALIG 118

Query: 562 RLRAAYEENDGKPEANPFGARAVRIYLREVRESQAKARGIPYEKKKRKRPT-TSTAM 729
           RLRAAYEEN G+PE+NPFGARAVRIYLREVRE QAKARGIPYEKKKRKRPT T+TA+
Sbjct: 119 RLRAAYEENGGRPESNPFGARAVRIYLREVREGQAKARGIPYEKKKRKRPTVTATAV 175


>ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265705 [Vitis vinifera]
          Length = 231

 Score =  280 bits (716), Expect = 4e-73
 Identities = 139/177 (78%), Positives = 148/177 (83%), Gaps = 1/177 (0%)
 Frame = +1

Query: 202 MDSISGGGSTDMNITEGSSAATXXXXXXXXXXXXXPLSRYESQKRRDWNTFLQYLKNHKP 381
           MDS SGGG+ D +  EG SA               P SRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSASGGGAADPSGGEGPSAG--GGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKP 58

Query: 382 PLSLARCSGAHVIEFLKYLDQFGKTKVHLLGCAYYGHPNPQAPCPCPLKQAWGSLDALIG 561
           PL+LARCSGAHVIEFLKYLDQFGKTKVH+ GC Y+GHPNP APC CPLKQAWGSLDALIG
Sbjct: 59  PLTLARCSGAHVIEFLKYLDQFGKTKVHISGCPYFGHPNPPAPCACPLKQAWGSLDALIG 118

Query: 562 RLRAAYEENDGKPEANPFGARAVRIYLREVRESQAKARGIPYEKKKRKRPT-TSTAM 729
           RLRAAYEEN G+PE+NPFGARAVRIYLREVRE QAKARGIPYEKKKRKRPT T+TA+
Sbjct: 119 RLRAAYEENGGRPESNPFGARAVRIYLREVREGQAKARGIPYEKKKRKRPTVTATAV 175


>ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|222845754|gb|EEE83301.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  268 bits (685), Expect = 1e-69
 Identities = 134/187 (71%), Positives = 145/187 (77%), Gaps = 10/187 (5%)
 Frame = +1

Query: 202 MDSISGGGSTD---------MNITEGSSAATXXXXXXXXXXXXXPLSRYESQKRRDWNTF 354
           MDS SGG +              T GSS+A+             P SRYESQKRRDWNTF
Sbjct: 1   MDSTSGGATAPGPNSGEPCPSAATAGSSSASQPQQQPEGSSPPAPPSRYESQKRRDWNTF 60

Query: 355 LQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHLLGCAYYGHPNPQAPCPCPLKQA 534
           LQY+KNHKPPL+LARCSGAHVIEFLKYLDQFGKTKVH+ GC Y+GHPNP APC CPLKQA
Sbjct: 61  LQYIKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKVHITGCPYFGHPNPPAPCSCPLKQA 120

Query: 535 WGSLDALIGRLRAAYEENDGKPEANPFGARAVRIYLREVRESQAKARGIPYE-KKKRKRP 711
           WGSLDALIGRLRAAYEEN G PE+NPFGARAVRIYLREVRE QAKARGIPYE KKKRKRP
Sbjct: 121 WGSLDALIGRLRAAYEENGGLPESNPFGARAVRIYLREVREGQAKARGIPYEKKKKRKRP 180

Query: 712 TTSTAMA 732
             + ++A
Sbjct: 181 NVAVSVA 187


>ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|222850379|gb|EEE87926.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  265 bits (677), Expect = 1e-68
 Identities = 134/184 (72%), Positives = 142/184 (77%), Gaps = 9/184 (4%)
 Frame = +1

Query: 202 MDSISGGGST-DMNITE--------GSSAATXXXXXXXXXXXXXPLSRYESQKRRDWNTF 354
           MDS SG  S  D N  E         +SA+              P SRYESQKRRDWNTF
Sbjct: 1   MDSTSGVASAPDPNSGEPGPSAGSSSASASLPQQQQPEGSSPPAPPSRYESQKRRDWNTF 60

Query: 355 LQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHLLGCAYYGHPNPQAPCPCPLKQA 534
           LQYLKNHKPPL+LARCSGAHVIEFLKYLDQFGKTKVH+ GC Y+GHPNP APC CPLKQA
Sbjct: 61  LQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKVHITGCPYFGHPNPPAPCSCPLKQA 120

Query: 535 WGSLDALIGRLRAAYEENDGKPEANPFGARAVRIYLREVRESQAKARGIPYEKKKRKRPT 714
           WGSLDALIGRLRAAYEEN G+PE+NPFGARAVRIYLREVRE QAKARGIPYEKKKRKR  
Sbjct: 121 WGSLDALIGRLRAAYEENGGRPESNPFGARAVRIYLREVREGQAKARGIPYEKKKRKRSN 180

Query: 715 TSTA 726
            + A
Sbjct: 181 VAVA 184


>ref|XP_003552937.1| PREDICTED: uncharacterized protein LOC100810350 [Glycine max]
          Length = 229

 Score =  263 bits (671), Expect = 6e-68
 Identities = 129/164 (78%), Positives = 136/164 (82%), Gaps = 1/164 (0%)
 Frame = +1

Query: 226 STDMNITEGSSA-ATXXXXXXXXXXXXXPLSRYESQKRRDWNTFLQYLKNHKPPLSLARC 402
           ST+     GSSA A              P SRYESQKRRDWNTFLQYL+NHKPPL+LARC
Sbjct: 15  STEAAPASGSSAPAISAAAPQPGGSSPAPPSRYESQKRRDWNTFLQYLQNHKPPLTLARC 74

Query: 403 SGAHVIEFLKYLDQFGKTKVHLLGCAYYGHPNPQAPCPCPLKQAWGSLDALIGRLRAAYE 582
           SGAHVIEFLKYLDQFGKTKVH+ GC YYG+PNP APC CPLKQAWGSLDALIGRLRAAYE
Sbjct: 75  SGAHVIEFLKYLDQFGKTKVHITGCPYYGYPNPPAPCACPLKQAWGSLDALIGRLRAAYE 134

Query: 583 ENDGKPEANPFGARAVRIYLREVRESQAKARGIPYEKKKRKRPT 714
           EN G+PE+NPFGARAVRIYLREVRE QAKARGIPYEKKKRKR T
Sbjct: 135 ENGGRPESNPFGARAVRIYLREVREGQAKARGIPYEKKKRKRTT 178


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