BLASTX nr result

ID: Coptis25_contig00012545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012545
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permea...   161   4e-38
ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permea...   161   6e-38
ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cu...   160   8e-38
ref|XP_002526293.1| GABA-specific permease, putative [Ricinus co...   159   2e-37
emb|CBI26962.3| unnamed protein product [Vitis vinifera]              158   5e-37

>ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 515

 Score =  161 bits (408), Expect = 4e-38
 Identities = 79/115 (68%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 SSHVP-NGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLR 167
           SSHV  NG A +DSG +RL +LGYKQELKRDL             SVLTGVTTLYNTGL 
Sbjct: 3   SSHVTANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGLN 62

Query: 166 FGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFAS 2
           +GGP+ +VYGWF+A  FT++V  SMAEICSS+PTSGGLYYWSAKLAGP+WAPFAS
Sbjct: 63  YGGPVSLVYGWFVASGFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFAS 117


>ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 520

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/116 (68%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = -3

Query: 346 ISSHV-PNGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGL 170
           + SHV  NG A +DSG +RL +LGYKQELKRDL             SVLTGVTTLYNTGL
Sbjct: 7   LPSHVVANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGL 66

Query: 169 RFGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFAS 2
            +GGP+ +VYGWF+A  FT+IV  SMAEICSS+PTSGGLYYWSAKLAGP+WAPFAS
Sbjct: 67  NYGGPVSLVYGWFLASAFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFAS 122


>ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cucumis sativus]
          Length = 513

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/104 (72%), Positives = 84/104 (80%)
 Frame = -3

Query: 313 VDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLRFGGPIVMVYGW 134
           +D+G +RLN+LGYKQELKRDL             SVLTG+TTLYN GL FGGP+ +VYGW
Sbjct: 10  LDTGHARLNELGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNNGLNFGGPVSLVYGW 69

Query: 133 FIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFAS 2
           FIAGFFT+ VG SMAEICSS+PTSGGLYYWSAKLAGP WAPFAS
Sbjct: 70  FIAGFFTMFVGLSMAEICSSYPTSGGLYYWSAKLAGPNWAPFAS 113


>ref|XP_002526293.1| GABA-specific permease, putative [Ricinus communis]
           gi|223534374|gb|EEF36082.1| GABA-specific permease,
           putative [Ricinus communis]
          Length = 528

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/109 (69%), Positives = 84/109 (77%)
 Frame = -3

Query: 328 NGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLRFGGPIV 149
           NG    DSG +RL +LGYKQELKRDL             SVLTG+TTLYNTGL FGGP+ 
Sbjct: 20  NGKVNSDSGAARLQELGYKQELKRDLSVFSNFAFSFSIISVLTGITTLYNTGLNFGGPVS 79

Query: 148 MVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFAS 2
           + YGWFIAG FT+ VG +MAEICSSFPTSGGLYYWSAKLAGP+WAPFAS
Sbjct: 80  LQYGWFIAGLFTMFVGLAMAEICSSFPTSGGLYYWSAKLAGPRWAPFAS 128


>emb|CBI26962.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/120 (67%), Positives = 91/120 (75%)
 Frame = -3

Query: 361 REVMPISSHVPNGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLY 182
           R    + S V +G A  DSGQSRL+QLGYKQELKRDL             SV+TGVTTLY
Sbjct: 5   RSERSLPSQVEDGIA--DSGQSRLSQLGYKQELKRDLSVVSNFAFSFSIISVITGVTTLY 62

Query: 181 NTGLRFGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFAS 2
           N+GL  GGP+VMVYGW IAG F+++VG SMAEICSS+PTSGGLYYWSAKLAGP WAPFAS
Sbjct: 63  NSGLTNGGPVVMVYGWLIAGGFSMLVGLSMAEICSSYPTSGGLYYWSAKLAGPSWAPFAS 122


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