BLASTX nr result

ID: Coptis25_contig00012544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012544
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526293.1| GABA-specific permease, putative [Ricinus co...   192   2e-47
ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permea...   188   3e-46
ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cu...   187   8e-46
ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permea...   185   3e-45
emb|CBI26962.3| unnamed protein product [Vitis vinifera]              184   6e-45

>ref|XP_002526293.1| GABA-specific permease, putative [Ricinus communis]
           gi|223534374|gb|EEF36082.1| GABA-specific permease,
           putative [Ricinus communis]
          Length = 528

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/114 (78%), Positives = 103/114 (90%)
 Frame = +3

Query: 177 STEVQNGVASMDSGQSRLQQLGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNTGLKF 356
           + + QNG  + DSG +RLQ+LGYKQELKRDLSV SNFAFSFSIISVLTGITTLYNTGL F
Sbjct: 15  TAQSQNGKVNSDSGAARLQELGYKQELKRDLSVFSNFAFSFSIISVLTGITTLYNTGLNF 74

Query: 357 GGPVSMVYGWFIAGLFTLFIGCSMAEICSAYPTSGGLYYWSAELAGAKWAPFAS 518
           GGPVS+ YGWFIAGLFT+F+G +MAEICS++PTSGGLYYWSA+LAG +WAPFAS
Sbjct: 75  GGPVSLQYGWFIAGLFTMFVGLAMAEICSSFPTSGGLYYWSAKLAGPRWAPFAS 128


>ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 520

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/118 (73%), Positives = 104/118 (88%)
 Frame = +3

Query: 165 EVVVSTEVQNGVASMDSGQSRLQQLGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNT 344
           +++ S  V NG A +DSG +RL++LGYKQELKRDLSV+SNFAFSFSIISVLTG+TTLYNT
Sbjct: 5   KILPSHVVANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNT 64

Query: 345 GLKFGGPVSMVYGWFIAGLFTLFIGCSMAEICSAYPTSGGLYYWSAELAGAKWAPFAS 518
           GL +GGPVS+VYGWF+A  FT+ +  SMAEICS+YPTSGGLYYWSA+LAG +WAPFAS
Sbjct: 65  GLNYGGPVSLVYGWFLASAFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFAS 122


>ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cucumis sativus]
          Length = 513

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/104 (83%), Positives = 96/104 (92%)
 Frame = +3

Query: 207 MDSGQSRLQQLGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNTGLKFGGPVSMVYGW 386
           +D+G +RL +LGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYN GL FGGPVS+VYGW
Sbjct: 10  LDTGHARLNELGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNNGLNFGGPVSLVYGW 69

Query: 387 FIAGLFTLFIGCSMAEICSAYPTSGGLYYWSAELAGAKWAPFAS 518
           FIAG FT+F+G SMAEICS+YPTSGGLYYWSA+LAG  WAPFAS
Sbjct: 70  FIAGFFTMFVGLSMAEICSSYPTSGGLYYWSAKLAGPNWAPFAS 113


>ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 515

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/109 (77%), Positives = 99/109 (90%)
 Frame = +3

Query: 192 NGVASMDSGQSRLQQLGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNTGLKFGGPVS 371
           NG A +DSG +RL++LGYKQELKRDLSV+SNFAFSFSIISVLTG+TTLYNTGL +GGPVS
Sbjct: 9   NGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGLNYGGPVS 68

Query: 372 MVYGWFIAGLFTLFIGCSMAEICSAYPTSGGLYYWSAELAGAKWAPFAS 518
           +VYGWF+A  FT+ +  SMAEICS+YPTSGGLYYWSA+LAG +WAPFAS
Sbjct: 69  LVYGWFVASGFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFAS 117


>emb|CBI26962.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  184 bits (467), Expect = 6e-45
 Identities = 92/124 (74%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
 Frame = +3

Query: 150 MVWKR-EVVVSTEVQNGVASMDSGQSRLQQLGYKQELKRDLSVVSNFAFSFSIISVLTGI 326
           M W R E  + ++V++G+A  DSGQSRL QLGYKQELKRDLSVVSNFAFSFSIISV+TG+
Sbjct: 1   MGWDRSERSLPSQVEDGIA--DSGQSRLSQLGYKQELKRDLSVVSNFAFSFSIISVITGV 58

Query: 327 TTLYNTGLKFGGPVSMVYGWFIAGLFTLFIGCSMAEICSAYPTSGGLYYWSAELAGAKWA 506
           TTLYN+GL  GGPV MVYGW IAG F++ +G SMAEICS+YPTSGGLYYWSA+LAG  WA
Sbjct: 59  TTLYNSGLTNGGPVVMVYGWLIAGGFSMLVGLSMAEICSSYPTSGGLYYWSAKLAGPSWA 118

Query: 507 PFAS 518
           PFAS
Sbjct: 119 PFAS 122


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