BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012538
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,...   160   5e-37
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   159   1e-36
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   158   3e-36
ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat...   157   6e-36

>ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|222871435|gb|EEF08566.1|
            predicted protein [Populus trichocarpa]
          Length = 677

 Score =  162 bits (411), Expect = 1e-37
 Identities = 73/85 (85%), Positives = 79/85 (92%)
 Frame = -3

Query: 1089 ALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAKHISKITE 910
            ALHDVEEEDKECHLAVHSEKLAIVF I+NT+PG+ IRITKN+RVCGDCHVA K ISKI E
Sbjct: 593  ALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAE 652

Query: 909  REIIVRDTNRFHHFRDGTCSCGDYW 835
            REII+RDT+RFHHFRDG CSCGDYW
Sbjct: 653  REIIIRDTHRFHHFRDGVCSCGDYW 677


>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score =  160 bits (405), Expect = 5e-37
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = -3

Query: 1089 ALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAKHISKITE 910
            ALHDVEEEDKE HLAVHSEKLA+ F IINT+PGTPIR+TKNLRVCGDCHVAAK ISKI E
Sbjct: 576  ALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAE 635

Query: 909  REIIVRDTNRFHHFRDGTCSCGDYW 835
            REII+RDT+RFHHF++G CSCGDYW
Sbjct: 636  REIIIRDTHRFHHFQEGCCSCGDYW 660


>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  159 bits (402), Expect = 1e-36
 Identities = 72/88 (81%), Positives = 77/88 (87%)
 Frame = -3

Query: 1089 ALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAKHISKITE 910
            ALHDVEEEDKECHLAVHSEKLAI F I+NT PG+PIRITKNLRVCGDCH+AAK ISKI  
Sbjct: 1583 ALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVG 1642

Query: 909  REIIVRDTNRFHHFRDGTCSCGDYW*PH 826
            REI +RDTNRFHHF +G CSCGDYW  H
Sbjct: 1643 REITIRDTNRFHHFYNGVCSCGDYWYSH 1670


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  158 bits (399), Expect = 3e-36
 Identities = 71/85 (83%), Positives = 76/85 (89%)
 Frame = -3

Query: 1089 ALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAKHISKITE 910
            ALHDVEEEDKECHLAVHSEKLAI F I+NT PG+PIRITKNLRVCGDCH+AAK ISKI  
Sbjct: 594  ALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVG 653

Query: 909  REIIVRDTNRFHHFRDGTCSCGDYW 835
            REI +RDTNRFHHF +G CSCGDYW
Sbjct: 654  REITIRDTNRFHHFYNGVCSCGDYW 678


>ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Glycine max]
          Length = 673

 Score =  157 bits (396), Expect = 6e-36
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -3

Query: 1089 ALHDVEEEDKECHLAVHSEKLAIVFVIINTEPGTPIRITKNLRVCGDCHVAAKHISKITE 910
            ALHDVEEEDKECHLAVHSEKLAIVF I+NT+  +PIRITKNLRVCGDCH+AAK ISKI +
Sbjct: 590  ALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQ 648

Query: 909  REIIVRDTNRFHHFRDGTCSCGDYW 835
            REI++RDTNRFHHF+DG CSCGDYW
Sbjct: 649  REIVIRDTNRFHHFKDGICSCGDYW 673