BLASTX nr result
ID: Coptis25_contig00012535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012535
(1497 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin... 483 e-134
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu... 458 e-126
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2... 447 e-123
ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containin... 442 e-122
ref|XP_004159245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 441 e-121
>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
Length = 496
Score = 483 bits (1243), Expect = e-134
Identities = 253/446 (56%), Positives = 302/446 (67%), Gaps = 1/446 (0%)
Frame = -2
Query: 1496 DAEEGLLHLKRARLLKEADSIFSAQTSKSTVEDAXXXXXXXXXXXXXXXXXEGFSVGSKC 1317
DAEEGL HLKRARLL+EADS + K T ED + + VGSKC
Sbjct: 53 DAEEGLFHLKRARLLREADS--ALHDHKYTAEDVKVEPLDPSDAEAEPLEEQSYHVGSKC 110
Query: 1316 RFRYTDGSWYNGQIIGLDGSRSARVTFLTPTSENMLICKFFLQQRCRFSTNCRLSHGIDV 1137
RFRYTDG WYNG I+GL+G SA+++FL+PTSENMLICKFFLQQRCRF TNCRLSHG+DV
Sbjct: 111 RFRYTDGRWYNGVILGLEGLDSAKISFLSPTSENMLICKFFLQQRCRFGTNCRLSHGVDV 170
Query: 1136 PLSSLKNYIPTLWKQISVGSNIWAISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRE 957
LSSLK Y PT+W+Q VGS+IWA+SD GIW++AELESWD+ L + +VVF+DDGSS +
Sbjct: 171 HLSSLKQYNPTIWEQSLVGSSIWAVSDAKYGIWKEAELESWDNELRVGKVVFRDDGSSEK 230
Query: 956 VDGEGLSLSEYAQMXXXXXXXXXXXXXXXXXXXXXSPEGLGFMEAAALQRGIQTDTAVFA 777
+ E +SLSEYA+M +GLGF+E+ ALQRGIQT+TA+FA
Sbjct: 231 LGTESISLSEYAEMSDGETDSSSEQSDSCDDEEEEGSQGLGFLESTALQRGIQTETAIFA 290
Query: 776 KWENHTRGIASKMMANMGYREGMGLGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNX 597
KWENHTRGIASKMMANMGYREGMGLGASGQG+VDP++VKVL PKQSLDHA +SH+++ N
Sbjct: 291 KWENHTRGIASKMMANMGYREGMGLGASGQGIVDPLSVKVLPPKQSLDHALESHENEENK 350
Query: 596 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFNPDVFSFINNQLATQIVHQN-GSLSKRQ 420
E PDVFS IN QLA N GS K+Q
Sbjct: 351 ESRGKKRSRGGKRKRDKKFAAAARAKKDKEESRPDVFSLINTQLAMHGEALNGGSAKKQQ 410
Query: 419 SKDFGESKNEDRKSLIAYDNEVRDLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXX 240
+K GE K EDR++L+AYD+EVR+LR++VEKLEEMVNRN+KEKVVYEA RKL+ETRK
Sbjct: 411 NKSLGEGKKEDRRALVAYDDEVRELRIRVEKLEEMVNRNKKEKVVYEAAMRKLNETRKAL 470
Query: 239 XXXXXXXXXXXXXXXSKEKEKRWLKF 162
+EKEKRWLKF
Sbjct: 471 AEAEAAHASASKAVVGREKEKRWLKF 496
>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
gi|223545337|gb|EEF46842.1| zinc finger protein, putative
[Ricinus communis]
Length = 495
Score = 458 bits (1178), Expect = e-126
Identities = 246/445 (55%), Positives = 292/445 (65%)
Frame = -2
Query: 1496 DAEEGLLHLKRARLLKEADSIFSAQTSKSTVEDAXXXXXXXXXXXXXXXXXEGFSVGSKC 1317
DAE+GLLHLKRARLL+E DS + SK T D SVGSKC
Sbjct: 54 DAEDGLLHLKRARLLREVDS--ALHDSKDTGNDVKIEPLDSDEVGAEPLEEHSHSVGSKC 111
Query: 1316 RFRYTDGSWYNGQIIGLDGSRSARVTFLTPTSENMLICKFFLQQRCRFSTNCRLSHGIDV 1137
RFR+ DG WYNG+II L+GS +A++ FLTPTSENML CKFFLQQRCRF TNCRLSHG+DV
Sbjct: 112 RFRHNDGRWYNGKIIELEGSTNAKIAFLTPTSENMLTCKFFLQQRCRFGTNCRLSHGVDV 171
Query: 1136 PLSSLKNYIPTLWKQISVGSNIWAISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRE 957
PLSSL+ YIPT+W Q VGS+IWA+SD NAGIWR+AELESWDD L + +VVF+DDGSS E
Sbjct: 172 PLSSLRTYIPTMWDQSMVGSSIWAVSDSNAGIWREAELESWDDKLRVGKVVFRDDGSSAE 231
Query: 956 VDGEGLSLSEYAQMXXXXXXXXXXXXXXXXXXXXXSPEGLGFMEAAALQRGIQTDTAVFA 777
++ + ++LSE+A S +GLGF+E++ LQRGIQT+TA+FA
Sbjct: 232 LESDSMNLSEHALKSDEEESHSSSEQSDSSDYEEESAQGLGFLESSTLQRGIQTETAIFA 291
Query: 776 KWENHTRGIASKMMANMGYREGMGLGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNX 597
+WENHTRGIASKMMANMGYR+GMGLGASGQGMVDPI+VKVL PKQSLDHA S K +
Sbjct: 292 RWENHTRGIASKMMANMGYRDGMGLGASGQGMVDPISVKVLPPKQSLDHALQSQKEEEIR 351
Query: 596 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFNPDVFSFINNQLATQIVHQNGSLSKRQS 417
E NPDVFS IN QLA NG SK +
Sbjct: 352 ENHGKKRSRGGKRKREKKLAALAKEAKEEEEMNPDVFSLINIQLAKHNEALNGG-SKTKQ 410
Query: 416 KDFGESKNEDRKSLIAYDNEVRDLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXX 237
SK DR+ LIAYD+E+++LR++ EKLEEM +RN+KEKVVYEA RKL+ETRK
Sbjct: 411 HHNKVSKKVDRRVLIAYDDEMKELRLRAEKLEEMASRNKKEKVVYEAAMRKLNETRKALA 470
Query: 236 XXXXXXXXXXXXXXSKEKEKRWLKF 162
SKEKEK+WLKF
Sbjct: 471 EAEAAHASASNAVVSKEKEKKWLKF 495
>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
predicted protein [Populus trichocarpa]
Length = 495
Score = 447 bits (1151), Expect = e-123
Identities = 241/445 (54%), Positives = 287/445 (64%)
Frame = -2
Query: 1496 DAEEGLLHLKRARLLKEADSIFSAQTSKSTVEDAXXXXXXXXXXXXXXXXXEGFSVGSKC 1317
D EEGLLHLKRARLL+EADS+ A S TVED + +SVGSKC
Sbjct: 54 DVEEGLLHLKRARLLREADSVLHA--SYHTVEDVKAEPLDPVHVEPEPLEDQCYSVGSKC 111
Query: 1316 RFRYTDGSWYNGQIIGLDGSRSARVTFLTPTSENMLICKFFLQQRCRFSTNCRLSHGIDV 1137
RFR+ DG WYNGQII L S +A++ FLTP SENMLICKFFLQ+RCRF T+CRLSHG+DV
Sbjct: 112 RFRHVDGRWYNGQIIELVCSDTAKIAFLTPISENMLICKFFLQERCRFGTSCRLSHGVDV 171
Query: 1136 PLSSLKNYIPTLWKQISVGSNIWAISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRE 957
LSSLKNY+PT+W Q VGS+IWA+SD N GIWRKAELESWD+ + QVVF D GSS +
Sbjct: 172 SLSSLKNYVPTMWDQSLVGSSIWALSDSNVGIWRKAELESWDNEHRVGQVVFHDGGSSAK 231
Query: 956 VDGEGLSLSEYAQMXXXXXXXXXXXXXXXXXXXXXSPEGLGFMEAAALQRGIQTDTAVFA 777
+ E +++SEYA M S EGLGF+E+ LQRGIQT TA+FA
Sbjct: 232 LGSEAMTISEYALMSDEEETDSSSEGSDSSDYDEESAEGLGFLESTNLQRGIQTGTAIFA 291
Query: 776 KWENHTRGIASKMMANMGYREGMGLGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNX 597
WENHTRGIASKMMANMGYREGMGLGASGQGM+DPI VKVL PKQSLDHA +S K +G
Sbjct: 292 TWENHTRGIASKMMANMGYREGMGLGASGQGMLDPIPVKVLPPKQSLDHALESQK-EGIK 350
Query: 596 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFNPDVFSFINNQLATQIVHQNGSLSKRQS 417
E PDVF+ INNQLA N +K+Q
Sbjct: 351 DNHGKKRSRGGKRKREKKFAAAARAAKAEEETRPDVFTLINNQLAGHNEALNSESAKKQK 410
Query: 416 KDFGESKNEDRKSLIAYDNEVRDLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXX 237
E K +R+ L+AYD+E+++LR++VEKLE+M NRN+KEKVVYE+ RKL+ETR
Sbjct: 411 SKGSEEKKVNRQDLLAYDDEIKELRIRVEKLEDMANRNKKEKVVYESAMRKLNETRIALA 470
Query: 236 XXXXXXXXXXXXXXSKEKEKRWLKF 162
+EKEK+WLKF
Sbjct: 471 KAEASKASASNAITGREKEKKWLKF 495
>ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 497
Score = 442 bits (1138), Expect = e-122
Identities = 236/447 (52%), Positives = 294/447 (65%), Gaps = 2/447 (0%)
Frame = -2
Query: 1496 DAEEGLLHLKRARLLKEADSIFSAQTSKSTVEDAXXXXXXXXXXXXXXXXXEGFSVGSKC 1317
DAEEGLLHLKR+RLL+EAD++ S + ED F VGSKC
Sbjct: 53 DAEEGLLHLKRSRLLREADTVLRGHDSNAA-EDVKVEPLDATDIKPEPLEDHSFFVGSKC 111
Query: 1316 RFRYTDGSWYNGQIIGLDGSRSARVTFLTPTSENMLICKFFLQQRCRFSTNCRLSHGIDV 1137
RFRYTDG WY+G+I+GLDGS SA+++FLTPT+ENML+CKFFLQQRCRF TNCRLSHG+D+
Sbjct: 112 RFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLMCKFFLQQRCRFGTNCRLSHGVDI 171
Query: 1136 PLSSLKNYIPTLWKQISVGSNIWAISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRE 957
PL+SL++Y+PT+W Q GS+I A+S N IWR AELESWDD L +AQVVF+ DG S++
Sbjct: 172 PLTSLRSYVPTIWNQSMAGSSILALSSRN-DIWRHAELESWDDALQVAQVVFKGDGYSQK 230
Query: 956 VDGEGLSLSEYAQMXXXXXXXXXXXXXXXXXXXXXSPEGLGFMEAAALQRGIQTDTAVFA 777
+ E ++LSEYA + +GLGF+E++ Q+GIQT+T +FA
Sbjct: 231 LGPEDIALSEYALINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFA 290
Query: 776 KWENHTRGIASKMMANMGYREGMGLGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDG-N 600
KWENHTRGIASKMMANMGYREGMGLGASGQGM++PI VKVL KQSLDHA +S K + N
Sbjct: 291 KWENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTN 350
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFNPDVFSFINNQLATQIVHQN-GSLSKR 423
E PDVF+ IN+ LA N GS+ K+
Sbjct: 351 DENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQ 410
Query: 422 QSKDFGESKNEDRKSLIAYDNEVRDLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKX 243
+ K + K DR+++IAYD+EV+DLR+++EKLEEMVNRN+KEKVVYEA RKL+ETRK
Sbjct: 411 KDKGSADWKKVDRRTIIAYDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKA 470
Query: 242 XXXXXXXXXXXXXXXXSKEKEKRWLKF 162
S+EKEKRWLKF
Sbjct: 471 LAEAEAAHASASNAVNSREKEKRWLKF 497
>ref|XP_004159245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 18-like [Cucumis sativus]
Length = 497
Score = 441 bits (1135), Expect = e-121
Identities = 235/447 (52%), Positives = 293/447 (65%), Gaps = 2/447 (0%)
Frame = -2
Query: 1496 DAEEGLLHLKRARLLKEADSIFSAQTSKSTVEDAXXXXXXXXXXXXXXXXXEGFSVGSKC 1317
DAEEGLLHLKR+RLL+EAD++ S + ED F VGSKC
Sbjct: 53 DAEEGLLHLKRSRLLREADTVLRGHDSNAA-EDVKVEPLDATDIKPEPLEDHSFFVGSKC 111
Query: 1316 RFRYTDGSWYNGQIIGLDGSRSARVTFLTPTSENMLICKFFLQQRCRFSTNCRLSHGIDV 1137
RFRYTDG WY+G+I+GLDGS SA+++FLTPT+ENML+CKFFLQQRCRF TNCRLSHG+D+
Sbjct: 112 RFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLMCKFFLQQRCRFGTNCRLSHGVDI 171
Query: 1136 PLSSLKNYIPTLWKQISVGSNIWAISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRE 957
PL+SL++Y+PT+W Q GS+I A+S N IWR AELESWDD L +AQVVF+ DG S++
Sbjct: 172 PLTSLRSYVPTIWNQSMAGSSILALSSRN-DIWRHAELESWDDALQVAQVVFKGDGYSQK 230
Query: 956 VDGEGLSLSEYAQMXXXXXXXXXXXXXXXXXXXXXSPEGLGFMEAAALQRGIQTDTAVFA 777
+ E ++LSEYA + +GLGF+E++ Q+GIQT+T +FA
Sbjct: 231 LGPEDIALSEYALINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFA 290
Query: 776 KWENHTRGIASKMMANMGYREGMGLGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDG-N 600
KWENHTRGIASKMMANMGYREGMGLGASGQGM++PI VKVL KQSLDHA +S K + N
Sbjct: 291 KWENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTN 350
Query: 599 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFNPDVFSFINNQLATQIVHQN-GSLSKR 423
E PDVF+ IN+ LA N GS+ K+
Sbjct: 351 DENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQ 410
Query: 422 QSKDFGESKNEDRKSLIAYDNEVRDLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKX 243
+ K + K DR+++IAYD+EV+DLR+++EKLEEMVNRN+KEKVVYEA RKL+ETRK
Sbjct: 411 KDKGSADGKKVDRRTIIAYDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKA 470
Query: 242 XXXXXXXXXXXXXXXXSKEKEKRWLKF 162
S+E EKRWLKF
Sbjct: 471 LAEAEAAHASASNAVNSREXEKRWLKF 497