BLASTX nr result

ID: Coptis25_contig00012529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012529
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncat...   142   2e-31
ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [...   141   3e-31
emb|CBI27785.3| unnamed protein product [Vitis vinifera]              138   3e-30
ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [...   138   3e-30
ref|XP_004141180.1| PREDICTED: transmembrane protein 184C-like [...   137   6e-30

>ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncatula]
            gi|355484377|gb|AES65580.1| Transmembrane protein 184C
            [Medicago truncatula]
          Length = 439

 Score =  142 bits (358), Expect = 2e-31
 Identities = 65/78 (83%), Positives = 70/78 (89%)
 Frame = -1

Query: 1149 NFSQMWALFCLVQFYHVTHQRLQPIKPLAKFISFKAIVFATWWQGVGIALLCAIHVLPNE 970
            NFSQ+WAL+CLVQFY+VTH+RLQPIKPLAKFISFKAIVFATWWQGVGIALLC   VLPN+
Sbjct: 221  NFSQIWALYCLVQFYNVTHERLQPIKPLAKFISFKAIVFATWWQGVGIALLCTFRVLPND 280

Query: 969  GKFQIGLQDFLICTEFII 916
            GK Q GLQDFLIC E  I
Sbjct: 281  GKLQTGLQDFLICIEMAI 298


>ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 396

 Score =  141 bits (356), Expect = 3e-31
 Identities = 66/78 (84%), Positives = 70/78 (89%)
 Frame = -1

Query: 1149 NFSQMWALFCLVQFYHVTHQRLQPIKPLAKFISFKAIVFATWWQGVGIALLCAIHVLPNE 970
            NFSQMWAL+CLVQFY+VTH+RLQPIKPLAKFISFKAIVFATWWQGVGIA+LC   VLPNE
Sbjct: 206  NFSQMWALYCLVQFYNVTHERLQPIKPLAKFISFKAIVFATWWQGVGIAVLCTFGVLPNE 265

Query: 969  GKFQIGLQDFLICTEFII 916
            GKFQ GLQDFLI  E  I
Sbjct: 266  GKFQTGLQDFLISIEMAI 283


>emb|CBI27785.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  138 bits (348), Expect = 3e-30
 Identities = 65/78 (83%), Positives = 69/78 (88%)
 Frame = -1

Query: 1149 NFSQMWALFCLVQFYHVTHQRLQPIKPLAKFISFKAIVFATWWQGVGIALLCAIHVLPNE 970
            NFSQMWALFCLVQFY+VTH RLQ IKPLAKFISFKAIVFATWWQGVGIALLC++ V P +
Sbjct: 235  NFSQMWALFCLVQFYNVTHGRLQSIKPLAKFISFKAIVFATWWQGVGIALLCSLGVWPKQ 294

Query: 969  GKFQIGLQDFLICTEFII 916
            GKFQ GLQDFLIC E  I
Sbjct: 295  GKFQTGLQDFLICIEMAI 312


>ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 432

 Score =  138 bits (348), Expect = 3e-30
 Identities = 65/78 (83%), Positives = 69/78 (88%)
 Frame = -1

Query: 1149 NFSQMWALFCLVQFYHVTHQRLQPIKPLAKFISFKAIVFATWWQGVGIALLCAIHVLPNE 970
            NFSQMWALFCLVQFY+VTH RLQ IKPLAKFISFKAIVFATWWQGVGIALLC++ V P +
Sbjct: 210  NFSQMWALFCLVQFYNVTHGRLQSIKPLAKFISFKAIVFATWWQGVGIALLCSLGVWPKQ 269

Query: 969  GKFQIGLQDFLICTEFII 916
            GKFQ GLQDFLIC E  I
Sbjct: 270  GKFQTGLQDFLICIEMAI 287


>ref|XP_004141180.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus]
            gi|449488211|ref|XP_004157969.1| PREDICTED: transmembrane
            protein 184C-like [Cucumis sativus]
          Length = 418

 Score =  137 bits (345), Expect = 6e-30
 Identities = 64/78 (82%), Positives = 70/78 (89%)
 Frame = -1

Query: 1149 NFSQMWALFCLVQFYHVTHQRLQPIKPLAKFISFKAIVFATWWQGVGIALLCAIHVLPNE 970
            NFSQMWALFCLVQFY+VTH++L+PIKPLAKFISFKAIVFATWWQGVGIALL  + VLP E
Sbjct: 207  NFSQMWALFCLVQFYNVTHEQLKPIKPLAKFISFKAIVFATWWQGVGIALLRELEVLPKE 266

Query: 969  GKFQIGLQDFLICTEFII 916
            GK +IGLQDFLIC E  I
Sbjct: 267  GKLEIGLQDFLICIEMAI 284


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