BLASTX nr result

ID: Coptis25_contig00012522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012522
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-15
ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-08

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 3/217 (1%)
 Frame = +2

Query: 5   DGPMEIEVSSIYLTTFVYMGWITNLRFVGALSLEKVHLWFLHPDRRGTYYMFGGLAKELP 184
           D  + +E+ SI L  F + G    L FV    L+K  +  L   RR T  +   LAK+LP
Sbjct: 218 DSLISVELKSINLEIFEFFGHPRKLTFVDVPHLKKALVRSLFIYRR-TSPICNALAKDLP 276

Query: 185 DLQVLSLGFVTTQVLPIPVNMTEFSHXXXXXXXXXXXXXXXXXXVASILNASPCLLKFHL 364
            LQ LSL  V  +VLP+P    +F                    V  +LNASP L    L
Sbjct: 277 QLQFLSL-IVKDEVLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQL 335

Query: 365 SL-RHGSIRGPRVKRDYSKQLYYKLKEIEISGLCGRLDVLELAIYLLNNAIGLERMILEF 541
            + R G  R    +R+YS+  +  LKE+++ G   + + +ELAIYLL N I LERM++  
Sbjct: 336 KIGRQGEGRSNGERREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALERMVVVV 395

Query: 542 QKRWRTVDEEEELESKKKQVHGVLSKEKPN--VEIIV 646
                 +D        +++V  +L KE+ N   E+I+
Sbjct: 396 SGSTLQMD-------LRQRVTNLLQKERGNSTAELII 425


>ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|222873948|gb|EEF11079.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
 Frame = +2

Query: 224 VLPIPVNMTEFSHXXXXXXXXXXXXXXXXXXVASILNASPCLLKFHLSLRH-GSIRGPRV 400
           VLP+P    +F                    V  +LNASP L    L + H G  R    
Sbjct: 1   VLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQLKIGHQGEGRSNGE 60

Query: 401 KRDYSKQLYYKLKEIEISGLCGRLDVLELAIYLLNNAIGLERMILEFQKRWRTVDEEEEL 580
           +R+YS+  +  LKE+++ G   + + +ELAIYLL N I LERM++        V +    
Sbjct: 61  RREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALERMVV-------VVSDSTMQ 113

Query: 581 ESKKKQVHGVLSKEKPN--VEIIV 646
              +++V  +L KEK N   E+I+
Sbjct: 114 MDLRQRVDNLLQKEKGNSTAELII 137


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