BLASTX nr result
ID: Coptis25_contig00012517
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012517
(1314 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301023.1| predicted protein [Populus trichocarpa] gi|2... 248 4e-77
ref|XP_002513850.1| cornichon, putative [Ricinus communis] gi|22... 247 6e-77
emb|CBI19097.3| unnamed protein product [Vitis vinifera] 236 8e-77
ref|XP_002284301.2| PREDICTED: phosphopantothenate--cysteine lig... 236 8e-77
emb|CAN76608.1| hypothetical protein VITISV_039485 [Vitis vinifera] 236 1e-76
>ref|XP_002301023.1| predicted protein [Populus trichocarpa] gi|222842749|gb|EEE80296.1|
predicted protein [Populus trichocarpa]
Length = 327
Score = 248 bits (633), Expect(2) = 4e-77
Identities = 121/159 (76%), Positives = 142/159 (89%)
Frame = +1
Query: 223 TIFEYLQILQLVAKSMKSLGSLGMFYLAAAVSDFYVPWESMAEHKIQSASGPMDMRLSQV 402
TIFEYLQILQ +A SMK LGSL +FYLAAAVSDFYVPW+SMAEHKIQSASGP+DMRL QV
Sbjct: 168 TIFEYLQILQSIAMSMKDLGSLAVFYLAAAVSDFYVPWKSMAEHKIQSASGPLDMRLVQV 227
Query: 403 PKMLSVLRNEWSPMAFCISFKLEMDSNILLKKADMALRKYKMNVVVANELLTRKEEVTVI 582
PKMLS L+ EW+PMAFCISFKLE DS ILL+KA+MAL+KY+M++VVANEL TRKEEVTV+
Sbjct: 228 PKMLSALKKEWAPMAFCISFKLETDSKILLEKAEMALKKYRMHMVVANELSTRKEEVTVV 287
Query: 583 TSNERITVRKDKNPADDDVEKPLIDLLIERHSAYIKESD 699
T NE+I V +DK AD DVE+PLI+L++ RHSAY+K+SD
Sbjct: 288 TGNEKILVCRDKTQADSDVEEPLIELIVGRHSAYVKDSD 326
Score = 68.2 bits (165), Expect(2) = 4e-77
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +2
Query: 2 YFVKAGYAVIFLHRRGTCQPYCRLLPDDSFLECLELTRDSNVQ 130
YF+KAGYAVIFL+RRGT QPYC+ LP+D LEC E + DS +Q
Sbjct: 94 YFIKAGYAVIFLYRRGTFQPYCQSLPEDPLLECFECSDDSTIQ 136
>ref|XP_002513850.1| cornichon, putative [Ricinus communis] gi|223546936|gb|EEF48433.1|
cornichon, putative [Ricinus communis]
Length = 277
Score = 247 bits (630), Expect(2) = 6e-77
Identities = 120/159 (75%), Positives = 140/159 (88%)
Frame = +1
Query: 223 TIFEYLQILQLVAKSMKSLGSLGMFYLAAAVSDFYVPWESMAEHKIQSASGPMDMRLSQV 402
TIFEYLQILQ++A SMK+LG MFYLAAAVSDFYVPW+ MAEHKIQSASGP+DMRL QV
Sbjct: 118 TIFEYLQILQMIAMSMKNLGPHTMFYLAAAVSDFYVPWKDMAEHKIQSASGPLDMRLVQV 177
Query: 403 PKMLSVLRNEWSPMAFCISFKLEMDSNILLKKADMALRKYKMNVVVANELLTRKEEVTVI 582
PKMLSV R EW+PMAFCISFKLE DS ILL+KADMAL+KYKM+VV+ANELLTRKEEV V+
Sbjct: 178 PKMLSVFRKEWAPMAFCISFKLETDSKILLEKADMALKKYKMHVVIANELLTRKEEVIVV 237
Query: 583 TSNERITVRKDKNPADDDVEKPLIDLLIERHSAYIKESD 699
T+ ++I V +DK D DVEKPL++LL+E+HSAYI +SD
Sbjct: 238 TAEQKIPVHRDKTQPDSDVEKPLVELLVEKHSAYITDSD 276
Score = 68.6 bits (166), Expect(2) = 6e-77
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +2
Query: 2 YFVKAGYAVIFLHRRGTCQPYCRLLPDDSFLECLELTRDSNVQ 130
YF+KAGYAVIFL+RRGTCQPYC+ LP+D LEC + S++Q
Sbjct: 44 YFIKAGYAVIFLYRRGTCQPYCQSLPEDPLLECFDSINGSDIQ 86
>emb|CBI19097.3| unnamed protein product [Vitis vinifera]
Length = 363
Score = 236 bits (602), Expect(2) = 8e-77
Identities = 118/156 (75%), Positives = 135/156 (86%)
Frame = +1
Query: 223 TIFEYLQILQLVAKSMKSLGSLGMFYLAAAVSDFYVPWESMAEHKIQSASGPMDMRLSQV 402
TIFEYLQIL +A M++LG GMFYLAAAVSDFYVPW SMAEHKIQSASGP+DMRL QV
Sbjct: 201 TIFEYLQILHKIAVPMRTLGGQGMFYLAAAVSDFYVPWNSMAEHKIQSASGPLDMRLVQV 260
Query: 403 PKMLSVLRNEWSPMAFCISFKLEMDSNILLKKADMALRKYKMNVVVANELLTRKEEVTVI 582
PKMLS+LR W+P+AFCISFKLE DSNILL+KADMAL+KYKM+ VVANEL TRK+EV V+
Sbjct: 261 PKMLSMLRKIWAPLAFCISFKLETDSNILLQKADMALQKYKMHAVVANELSTRKDEVVVV 320
Query: 583 TSNERITVRKDKNPADDDVEKPLIDLLIERHSAYIK 690
TSNERI+V++DK A DDVE LI LL++RHS YIK
Sbjct: 321 TSNERISVKRDKAVAGDDVENHLIKLLVDRHSLYIK 356
Score = 79.0 bits (193), Expect(2) = 8e-77
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 2 YFVKAGYAVIFLHRRGTCQPYCRLLPDDSFLECLELTRDSNVQ 130
YF+KAGY VIFL+RRG+CQPYCR LPDD FLEC E T++SNVQ
Sbjct: 127 YFLKAGYGVIFLYRRGSCQPYCRFLPDDPFLECFEFTQESNVQ 169
>ref|XP_002284301.2| PREDICTED: phosphopantothenate--cysteine ligase 1-like [Vitis
vinifera]
Length = 329
Score = 236 bits (602), Expect(2) = 8e-77
Identities = 118/156 (75%), Positives = 135/156 (86%)
Frame = +1
Query: 223 TIFEYLQILQLVAKSMKSLGSLGMFYLAAAVSDFYVPWESMAEHKIQSASGPMDMRLSQV 402
TIFEYLQIL +A M++LG GMFYLAAAVSDFYVPW SMAEHKIQSASGP+DMRL QV
Sbjct: 167 TIFEYLQILHKIAVPMRTLGGQGMFYLAAAVSDFYVPWNSMAEHKIQSASGPLDMRLVQV 226
Query: 403 PKMLSVLRNEWSPMAFCISFKLEMDSNILLKKADMALRKYKMNVVVANELLTRKEEVTVI 582
PKMLS+LR W+P+AFCISFKLE DSNILL+KADMAL+KYKM+ VVANEL TRK+EV V+
Sbjct: 227 PKMLSMLRKIWAPLAFCISFKLETDSNILLQKADMALQKYKMHAVVANELSTRKDEVVVV 286
Query: 583 TSNERITVRKDKNPADDDVEKPLIDLLIERHSAYIK 690
TSNERI+V++DK A DDVE LI LL++RHS YIK
Sbjct: 287 TSNERISVKRDKAVAGDDVENHLIKLLVDRHSLYIK 322
Score = 79.0 bits (193), Expect(2) = 8e-77
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 2 YFVKAGYAVIFLHRRGTCQPYCRLLPDDSFLECLELTRDSNVQ 130
YF+KAGY VIFL+RRG+CQPYCR LPDD FLEC E T++SNVQ
Sbjct: 93 YFLKAGYGVIFLYRRGSCQPYCRFLPDDPFLECFEFTQESNVQ 135
>emb|CAN76608.1| hypothetical protein VITISV_039485 [Vitis vinifera]
Length = 329
Score = 236 bits (602), Expect(2) = 1e-76
Identities = 118/156 (75%), Positives = 135/156 (86%)
Frame = +1
Query: 223 TIFEYLQILQLVAKSMKSLGSLGMFYLAAAVSDFYVPWESMAEHKIQSASGPMDMRLSQV 402
TIFEYLQIL +A M++LG GMFYLAAAVSDFYVPW SMAEHKIQSASGP+DMRL QV
Sbjct: 167 TIFEYLQILHKIAVPMRTLGGQGMFYLAAAVSDFYVPWNSMAEHKIQSASGPLDMRLVQV 226
Query: 403 PKMLSVLRNEWSPMAFCISFKLEMDSNILLKKADMALRKYKMNVVVANELLTRKEEVTVI 582
PKMLS+LR W+P+AFCISFKLE DSNILL+KADMAL+KYKM+ VVANEL TRK+EV V+
Sbjct: 227 PKMLSMLRKIWAPLAFCISFKLETDSNILLQKADMALQKYKMHAVVANELSTRKDEVVVV 286
Query: 583 TSNERITVRKDKNPADDDVEKPLIDLLIERHSAYIK 690
TSNERI+V++DK A DDVE LI LL++RHS YIK
Sbjct: 287 TSNERISVKRDKAVAGDDVENHLIKLLVDRHSLYIK 322
Score = 78.2 bits (191), Expect(2) = 1e-76
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 2 YFVKAGYAVIFLHRRGTCQPYCRLLPDDSFLECLELTRDSNVQ 130
YF+KAGY VIFL+RRG+CQPYCR LPDD FLEC E T++SNVQ
Sbjct: 93 YFLKAGYGVIFLYRRGSCQPYCRSLPDDPFLECFEFTQESNVQ 135