BLASTX nr result

ID: Coptis25_contig00012498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012498
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321019.1| predicted protein [Populus trichocarpa] gi|2...   151   3e-34
ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-31
ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252...   141   3e-31
ref|XP_002531871.1| chloroplast-targeted copper chaperone, putat...   131   4e-28
emb|CBI39526.3| unnamed protein product [Vitis vinifera]              129   2e-27

>ref|XP_002321019.1| predicted protein [Populus trichocarpa] gi|222861792|gb|EEE99334.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  151 bits (382), Expect = 3e-34
 Identities = 103/303 (33%), Positives = 135/303 (44%), Gaps = 15/303 (4%)
 Frame = -2

Query: 1121 MATVVPEEASEPLKYQKWTLKVSIHCEGCKRKVKKVLQNIDGVYATTIDSQQHKVIVTGD 942
            MAT   EEA + LKYQ W LKVSIHCEGCK+KVKKVLQ+IDGVY T +DS +HKV VTG+
Sbjct: 1    MATKPAEEALDMLKYQTWFLKVSIHCEGCKKKVKKVLQSIDGVYKTDVDSHRHKVTVTGN 60

Query: 941  VDADTLIKKLVKTGKHAELWPXXXXXXXXXXXXXXXXXXXXXXXNTXXXXXXXXXXXXXE 762
            VDA TLIK+L+++GKHAELWP                       +               
Sbjct: 61   VDAQTLIKRLMRSGKHAELWPENYENKEKRSGKSKNNDKQKSPKDVQEVGNDGHHQKSTP 120

Query: 761  KKPCEAGGITVKTNGKIMENLQNGNQSSSCGVDMKGSGNDAPTEXXXXXXXXXXXXXXGQ 582
             +  E    T   NG         +Q+S    D  G  + AP                 +
Sbjct: 121  AENPETDAKTSSGNG-------GDDQNSDAESDDAGEESAAPVAAAASGVGSGKNKKKKK 173

Query: 581  -------NSNNTPSGVETSIVPVSTGS--------PSQAVSVNLSPTPQQVYTYSTYDLP 447
                   NSNN  +G E+  VP  TGS        P   + ++  P P  VY Y     P
Sbjct: 174  KKKRPNGNSNNGANGAESGGVPADTGSSVADLYSAPPMPLMIHSPPQP-PVYPYPPMHYP 232

Query: 446  SYGPPLYTTSYNMTYPSNGYNAALYQLGPSPYTYSDVYTPSQPLDVADDTYCDEEEASAC 267
               PP Y  +Y   YPS   +   + +    + Y + Y P  P     + Y D++  + C
Sbjct: 233  P--PPAYGINYRTAYPSASESYYTHPMHDHIHYYQNRYQPPAPPSDPINEYGDDDNETGC 290

Query: 266  SIM 258
            S+M
Sbjct: 291  SVM 293


>ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|222862087|gb|EEE99629.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  143 bits (360), Expect = 1e-31
 Identities = 107/299 (35%), Positives = 132/299 (44%), Gaps = 11/299 (3%)
 Frame = -2

Query: 1121 MATVVPEEASEPLKYQKWTLKVSIHCEGCKRKVKKVLQNIDGVYATTIDSQQHKVIVTGD 942
            MAT   EEA E LKYQ W LKVSIHCEGCK+KVKKVLQ+IDGVY T +DS QHKV VTG+
Sbjct: 1    MATKPAEEALEQLKYQTWVLKVSIHCEGCKKKVKKVLQSIDGVYKTEVDSHQHKVTVTGN 60

Query: 941  VDADTLIKKLVKTGKHAELWPXXXXXXXXXXXXXXXXXXXXXXXNTXXXXXXXXXXXXXE 762
            VDA  LIKKL+++GK+AELWP                       +              +
Sbjct: 61   VDAQILIKKLMRSGKYAELWPKNSENKEKTSGKSQNNDKQKSPKDV---QEVGGGDDHQK 117

Query: 761  KKPCEAGGITVKTNGKIMENLQNGNQSSSCGVDMKGSGNDAPTEXXXXXXXXXXXXXXGQ 582
              P E      K  G    + QN    S  G     S   A                   
Sbjct: 118  NTPAEKPETEAKIGGGNGGDDQNSGAESDDGGLESASPVAAAASGGGSGKKKKKKKKPSG 177

Query: 581  NSNNTPSGVETSIVPVSTGSPS-----QAVSVNL---SPTPQQVYTYSTYDLPSYGPPL- 429
            NSNN  SG  +  VP  TGS S      A S++L   SP  Q VY Y     P Y  P+ 
Sbjct: 178  NSNNGASGDNSGGVPADTGSSSMADLDSAPSMSLMSHSPPHQHVYPYP----PMYHQPIP 233

Query: 428  -YTTSYNMTYPSNGYNAALYQL-GPSPYTYSDVYTPSQPLDVADDTYCDEEEASACSIM 258
             Y  +YN  Y S   +   + +     Y +   Y P  P       + D++  + CS+M
Sbjct: 234  VYGINYNTAYCSASESCYAHPMHAQIHYHHQQRYQPPAPPSDLIKEFNDDDNETGCSVM 292


>ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252094 [Vitis vinifera]
            gi|297743851|emb|CBI36821.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  141 bits (356), Expect = 3e-31
 Identities = 97/288 (33%), Positives = 129/288 (44%)
 Frame = -2

Query: 1121 MATVVPEEASEPLKYQKWTLKVSIHCEGCKRKVKKVLQNIDGVYATTIDSQQHKVIVTGD 942
            MAT   ++  +PLKYQ W LKVSIHCEGCK+KVKKVL +IDGVY T IDSQQHKV VTG+
Sbjct: 1    MATSPAQDPPQPLKYQTWVLKVSIHCEGCKKKVKKVLHSIDGVYTTVIDSQQHKVTVTGN 60

Query: 941  VDADTLIKKLVKTGKHAELWPXXXXXXXXXXXXXXXXXXXXXXXNTXXXXXXXXXXXXXE 762
            VDA+TLIKKLVKTGKHA+LWP                       ++             +
Sbjct: 61   VDAETLIKKLVKTGKHADLWPEKPDNKENSPGKSKNKKKQNDAKDSNKGNGEGDQKNSAD 120

Query: 761  KKPCEAGGITVKTNGKIMENLQNGNQSSSCGVDMKGSGNDAPTEXXXXXXXXXXXXXXGQ 582
            K    A       +G   +   + ++      D  G   +   +              GQ
Sbjct: 121  KPENSAKDAKKDDDGAGAKTAPSADELQG---DEGGESEEVDDKTSSSTGGKKKKKKKGQ 177

Query: 581  NSNNTPSGVETSIVPVSTGSPSQAVSVNLSPTPQQVYTYSTYDLPSYGPPLYTTSYNMTY 402
            N+N T     +   P  +  P  + S    P P  + T   Y    Y PP+Y  +YN   
Sbjct: 178  NNNPTNPNPNSGAPPAESEYPVSSPSPAPPPNP-PLPTIYPYPALYYPPPVYGLNYN--- 233

Query: 401  PSNGYNAALYQLGPSPYTYSDVYTPSQPLDVADDTYCDEEEASACSIM 258
                           P T S  Y P+ P+D  ++   ++E+   CSIM
Sbjct: 234  -----------TASFPSTSSYYYRPATPIDPIEE--LNDEDNKGCSIM 268


>ref|XP_002531871.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
            gi|223528479|gb|EEF30508.1| chloroplast-targeted copper
            chaperone, putative [Ricinus communis]
          Length = 317

 Score =  131 bits (329), Expect = 4e-28
 Identities = 110/329 (33%), Positives = 142/329 (43%), Gaps = 41/329 (12%)
 Frame = -2

Query: 1121 MATVVPEEASEPLKYQKWTLKVSIHCEGCKRKVKKVLQNIDGVYATTIDSQQHKVIVTGD 942
            MAT + E A E LKYQ W  +VSIHCEGCK+KVKKVLQ I+GV+ T IDSQQHKV VTG+
Sbjct: 1    MATKLNEAAPEQLKYQTWAFRVSIHCEGCKKKVKKVLQGIEGVFMTEIDSQQHKVTVTGN 60

Query: 941  VDADTLIKKLVKTGKHAELWPXXXXXXXXXXXXXXXXXXXXXXXNTXXXXXXXXXXXXXE 762
            V A+TLIKKL K+GKHAELWP                                      +
Sbjct: 61   VSAETLIKKLGKSGKHAELWPEKPEIIDHKKSGKSKNSGKQKPSEDVPEVGAGKGDNDEQ 120

Query: 761  KKPCEAGGITVKT---NGKIMENLQNGNQSSSCGVDM---KGSGNDAPTEXXXXXXXXXX 600
            K P E      K    NG   ++L       + G D     GSG+ +  +          
Sbjct: 121  KNPAEKPETVQKASLDNGGGGDHLPEVKSEEAVGEDTAANDGSGSGSKKK------KKKK 174

Query: 599  XXXXGQNSNNTPSGVETSIVPVSTGSPSQ---------------AVSVNLSPTPQQVYTY 465
                  NSN   +G   S  P S G P++                 S+N SP P   + +
Sbjct: 175  KGQNDNNSNTGGNGTSGSGDPAS-GPPAEPAVSAPAAVPDPAPPMTSLNHSP-PHHRHLH 232

Query: 464  STYDLPSY--GPPL---YTTSYNMTYPSNGYNAALYQLGPSPYTYSDVYT---------- 330
            +   +P Y   PP+   Y  SYN  YPS    A      PS   ++ +Y+          
Sbjct: 233  AYPYVPMYYASPPVAGTYGVSYNTAYPS----ATTSYYAPSMAMHAHLYSQSAERRQPPA 288

Query: 329  -PSQPLD----VADDTYCDEEEASACSIM 258
             PS+P++      D  Y D +    CSIM
Sbjct: 289  PPSEPINKITYYNDRDYHDYDHQGGCSIM 317


>emb|CBI39526.3| unnamed protein product [Vitis vinifera]
          Length = 129

 Score =  129 bits (324), Expect = 2e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = -2

Query: 1118 ATVVPEEASEPLKYQKWTLKVSIHCEGCKRKVKKVLQNIDGVYATTIDSQQHKVIVTGDV 939
            A  V EEA EPLKY+ W LKVSIHCEGCK+KVKK+LQNIDGVY T ID++Q KV VTG+V
Sbjct: 7    AKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKVCVTGNV 66

Query: 938  DADTLIKKLVKTGKHAELWP 879
            D +TL+KKLVK GKHAELWP
Sbjct: 67   DVETLLKKLVKNGKHAELWP 86


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