BLASTX nr result

ID: Coptis25_contig00012490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012490
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271854.1| PREDICTED: uncharacterized protein C24H6.02c...   139   8e-31
ref|XP_002530932.1| conserved hypothetical protein [Ricinus comm...   135   1e-29
ref|XP_003556240.1| PREDICTED: DNL-type zinc finger protein-like...   131   1e-28
ref|NP_001236852.1| uncharacterized protein LOC100527239 [Glycin...   131   1e-28
ref|XP_002312005.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28

>ref|XP_002271854.1| PREDICTED: uncharacterized protein C24H6.02c [Vitis vinifera]
          Length = 192

 Score =  139 bits (349), Expect = 8e-31
 Identities = 90/196 (45%), Positives = 106/196 (54%), Gaps = 33/196 (16%)
 Frame = +1

Query: 64  MAARLLQRRISSALFGHQSPASLLFKDNASSFGKNAVTQSSLLSTHNYFSTIQTQVEPSN 243
           MAARLLQR I  +  G + P + + K+ +  F  +A   ++      Y   + TQVEP+N
Sbjct: 1   MAARLLQR-IGRSFLGPKHPQTPIIKEPSWQFLPSA--SAAFTRDQFYRRGLGTQVEPTN 57

Query: 244 KNEAENDDKKC---------------------------------LKTSPRHDLAMMFTCK 324
              A  D++KC                                 LKTS RHDLAM+FTCK
Sbjct: 58  Y--ANEDEEKCEAGSLNLNSDSADDVSQVKSDDNSAVKYTAMSNLKTSSRHDLAMIFTCK 115

Query: 325 VCETRSVKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKG 504
           VCETRSVKT  R+SYE              HLIADRLG FGEPGS+EDFL ARGEE  KG
Sbjct: 116 VCETRSVKTACRESYERGVVVVRCDGCSNLHLIADRLGWFGEPGSIEDFLDARGEEVKKG 175

Query: 505 DPDTLNLTLEDLAGKK 552
             DTLNLTLEDLAG K
Sbjct: 176 SADTLNLTLEDLAGMK 191


>ref|XP_002530932.1| conserved hypothetical protein [Ricinus communis]
           gi|223529491|gb|EEF31447.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  135 bits (339), Expect = 1e-29
 Identities = 72/115 (62%), Positives = 80/115 (69%), Gaps = 5/115 (4%)
 Frame = +1

Query: 235 PSNKNEAENDDKK-----CLKTSPRHDLAMMFTCKVCETRSVKTMSRDSYEXXXXXXXXX 399
           PS+ N  E+   K      LKTSPRHDLAM+FTCKVCETRSVKT+ R+SYE         
Sbjct: 85  PSDINSNEDSPVKYSAVSSLKTSPRHDLAMIFTCKVCETRSVKTICRESYEKGVVVARCG 144

Query: 400 XXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKGDPDTLNLTLEDLAGKKNISD 564
                HLIADRLG FGEPGS+EDFLAARGEE  KG  DTLNLTLEDLAG K + +
Sbjct: 145 GCNNLHLIADRLGWFGEPGSIEDFLAARGEEVRKGSTDTLNLTLEDLAGNKILKE 199


>ref|XP_003556240.1| PREDICTED: DNL-type zinc finger protein-like [Glycine max]
          Length = 189

 Score =  131 bits (330), Expect = 1e-28
 Identities = 82/191 (42%), Positives = 104/191 (54%), Gaps = 28/191 (14%)
 Frame = +1

Query: 64  MAARLLQRRISSALFGHQ------------SPASLLFKDNASSFGKNAVT---------- 177
           MAAR+LQ+R+ S +F  Q            SP S +   N   F +  VT          
Sbjct: 1   MAARMLQKRLIS-IFSRQTHHPITQESSWYSPTSAIL--NRYGFHQRRVTTHTNPIKPVC 57

Query: 178 ------QSSLLSTHNYFSTIQTQVEPSNKNEAENDDKKCLKTSPRHDLAMMFTCKVCETR 339
                 ++  L +      + T +  +  +  +   K  LKTS RHDLAM+FTCKVCETR
Sbjct: 58  EDVENNEADTLKSSPNPDEVATSISVNETSSIKFSAKSSLKTSSRHDLAMVFTCKVCETR 117

Query: 340 SVKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKGDPDTL 519
           S+KT+ R+SYE              HLIAD LG FGEPGS+EDFLA+RGEE  +G  DTL
Sbjct: 118 SIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLASRGEEVKRGSVDTL 177

Query: 520 NLTLEDLAGKK 552
           NLTLEDLAG+K
Sbjct: 178 NLTLEDLAGRK 188


>ref|NP_001236852.1| uncharacterized protein LOC100527239 [Glycine max]
           gi|255631854|gb|ACU16294.1| unknown [Glycine max]
          Length = 188

 Score =  131 bits (330), Expect = 1e-28
 Identities = 83/190 (43%), Positives = 101/190 (53%), Gaps = 27/190 (14%)
 Frame = +1

Query: 64  MAARLLQRRISSALFGHQ-----------SPASLLFKDNASSFGKNAV------------ 174
           MAAR+LQRR  S +F  Q           SP S +   N+  F +  V            
Sbjct: 1   MAARMLQRRFIS-IFSRQTHHPITQESWYSPTSAIL--NSYGFHQRGVMTHTNPIKPVCE 57

Query: 175 ----TQSSLLSTHNYFSTIQTQVEPSNKNEAENDDKKCLKTSPRHDLAMMFTCKVCETRS 342
                ++  L +      + T +  +  +  +   K  LKTS RHDL M+FTCKVCETRS
Sbjct: 58  DVENNEADTLKSSPNPDEVATSISVNETSSVKFSTKSSLKTSSRHDLVMVFTCKVCETRS 117

Query: 343 VKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKGDPDTLN 522
           +KT  R+SYE              HLIAD LG FGEPGSVEDFLAARGEE  +G  DTLN
Sbjct: 118 IKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVKRGSVDTLN 177

Query: 523 LTLEDLAGKK 552
           LTLEDLAG+K
Sbjct: 178 LTLEDLAGRK 187


>ref|XP_002312005.1| predicted protein [Populus trichocarpa] gi|222851825|gb|EEE89372.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  129 bits (324), Expect = 6e-28
 Identities = 88/198 (44%), Positives = 112/198 (56%), Gaps = 34/198 (17%)
 Frame = +1

Query: 61  LMAAR--LLQRRISSALFGHQSP-ASLLFKDNASSFGKNAVTQSSLLSTHNYFST-IQTQ 228
           + AAR  L  RR+ SAL  +  P  S L K+++     +A   SSL + ++++   +QT 
Sbjct: 1   MAAARNTLQLRRLLSALAHNNQPFTSSLNKEHSWKLLPSA---SSLFTRNDFYGRGLQTL 57

Query: 229 VEPSNK--NEAENDDK----KC------------------------LKTSPRHDLAMMFT 318
            +P+N+   E+EN +      C                        LKTSPRHDLAM+FT
Sbjct: 58  AKPANQANEESENHENGLKPNCSSANAPAQVNSNEGSATTYSSLSNLKTSPRHDLAMIFT 117

Query: 319 CKVCETRSVKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFI 498
           CKVCETRSVKT+ R+SYE              HLIAD LG FG+PGS+E+ LAARGEE  
Sbjct: 118 CKVCETRSVKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGQPGSIEEILAARGEEVK 177

Query: 499 KGDPDTLNLTLEDLAGKK 552
           KG  DT NLTLEDLAGKK
Sbjct: 178 KGSADTFNLTLEDLAGKK 195


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