BLASTX nr result

ID: Coptis25_contig00012457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012457
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24060.3| unnamed protein product [Vitis vinifera]              186   9e-45
ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244...   186   9e-45
ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216...   159   2e-36
ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cuc...   154   3e-35
ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30

>emb|CBI24060.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  186 bits (472), Expect = 9e-45
 Identities = 118/246 (47%), Positives = 154/246 (62%), Gaps = 32/246 (13%)
 Frame = +1

Query: 115 RPSINLSLFTN--------FSDENGSNNSSKSPRNFEYGVVGLGIVAAMND---AHQDVI 261
           R ++NLSLFTN        +S ++  ++++KSPRNFE GVVGLGIVAA+ND    H+ + 
Sbjct: 64  RLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAALNDLDNTHESLS 123

Query: 262 SSVKTTTKLDKMS-KSEPIPIV---LSKPVVEK--------DEVMELSESYTCVVSNLGH 405
           S     + L   S +S PIPI       P VEK        +  ME+SESYTCV+S+ G+
Sbjct: 124 SKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGN 183

Query: 406 G--RKKEYFDDERISGKSGYRGGGVFFTSPLKDTGQGIML-------FQSADFLTSCYLC 558
              +K+ YFDD     K       +    P+  T     +       F++ADFL+SCYLC
Sbjct: 184 NLIKKRVYFDD-----KPNGVVDDITTAVPISSTDAAYWVASEAAPPFKTADFLSSCYLC 238

Query: 559 KKKLHGLDIFMYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCSAPRIFS 738
           +KKLHGLDIFMYRG+KAFCSAECR  Q++SDE ++ KC S A+KSFDYS+SPCS P +F 
Sbjct: 239 QKKLHGLDIFMYRGEKAFCSAECRSNQMVSDEYKE-KCGSEAMKSFDYSVSPCSGPMLFF 297

Query: 739 AGVAAA 756
           AGVAAA
Sbjct: 298 AGVAAA 303


>ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244902 isoform 1 [Vitis
           vinifera]
          Length = 267

 Score =  186 bits (472), Expect = 9e-45
 Identities = 118/246 (47%), Positives = 154/246 (62%), Gaps = 32/246 (13%)
 Frame = +1

Query: 115 RPSINLSLFTN--------FSDENGSNNSSKSPRNFEYGVVGLGIVAAMND---AHQDVI 261
           R ++NLSLFTN        +S ++  ++++KSPRNFE GVVGLGIVAA+ND    H+ + 
Sbjct: 28  RLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAALNDLDNTHESLS 87

Query: 262 SSVKTTTKLDKMS-KSEPIPIV---LSKPVVEK--------DEVMELSESYTCVVSNLGH 405
           S     + L   S +S PIPI       P VEK        +  ME+SESYTCV+S+ G+
Sbjct: 88  SKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGN 147

Query: 406 G--RKKEYFDDERISGKSGYRGGGVFFTSPLKDTGQGIML-------FQSADFLTSCYLC 558
              +K+ YFDD     K       +    P+  T     +       F++ADFL+SCYLC
Sbjct: 148 NLIKKRVYFDD-----KPNGVVDDITTAVPISSTDAAYWVASEAAPPFKTADFLSSCYLC 202

Query: 559 KKKLHGLDIFMYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCSAPRIFS 738
           +KKLHGLDIFMYRG+KAFCSAECR  Q++SDE ++ KC S A+KSFDYS+SPCS P +F 
Sbjct: 203 QKKLHGLDIFMYRGEKAFCSAECRSNQMVSDEYKE-KCGSEAMKSFDYSVSPCSGPMLFF 261

Query: 739 AGVAAA 756
           AGVAAA
Sbjct: 262 AGVAAA 267


>ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216928 [Cucumis sativus]
          Length = 234

 Score =  159 bits (401), Expect = 2e-36
 Identities = 114/238 (47%), Positives = 146/238 (61%), Gaps = 23/238 (9%)
 Frame = +1

Query: 112 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYGVVGLGIVAAMNDA---HQDVISSVKTTT 282
           ++P+I +SLFT  S  + S++ +KSPR+FE GVVGLGIVAAM D+   H+  +SS   + 
Sbjct: 8   RKPTIGISLFTALSG-SFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSKAVSP 66

Query: 283 KLDKMSKSEPIPIVLS-KPV--------VEKDE----VMELSESYTCVVSNLGHG--RKK 417
           +      S  IPIV S KP         +EK+     V ELSESYTCV S+ G+    K+
Sbjct: 67  R------SCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKR 120

Query: 418 EYFDDER--ISGKSG-YRGGGVFFTSPLKDTGQGIMLFQSADFLTSCYLCKKKLHGLDIF 588
            YF+ E   ++G+S      GVF TSP+   G     F +A+FL+SCYLC K LHGLDIF
Sbjct: 121 VYFNGELDLVNGRSSNIVRSGVFSTSPMS-FGVAERGFCAAEFLSSCYLCSKHLHGLDIF 179

Query: 589 MYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCS--APRIFSAGVAAA 756
           MYRG+KAFCS ECR K I  D+ R  KC S A+K  DYS SPCS   P   ++GV AA
Sbjct: 180 MYRGEKAFCSVECRDKHIRGDDCRD-KCGSKAMK--DYSASPCSVAGPPALASGVVAA 234


>ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cucumis sativus]
          Length = 236

 Score =  154 bits (390), Expect = 3e-35
 Identities = 109/224 (48%), Positives = 139/224 (62%), Gaps = 21/224 (9%)
 Frame = +1

Query: 112 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYGVVGLGIVAAMNDA---HQDVISSVKTTT 282
           ++P+I +SLFT  S  + S++ +KSPR+FE GVVGLGIVAAM D+   H+  +SS   + 
Sbjct: 8   RKPTIGISLFTALSG-SFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSKAVSP 66

Query: 283 KLDKMSKSEPIPIVLS-KPV--------VEKDE----VMELSESYTCVVSNLGHG--RKK 417
           +      S  IPIV S KP         +EK+     V ELSESYTCV S+ G+    K+
Sbjct: 67  R------SCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKR 120

Query: 418 EYFDDER--ISGKSG-YRGGGVFFTSPLKDTGQGIMLFQSADFLTSCYLCKKKLHGLDIF 588
            YF+ E   ++G+S      GVF TSP+   G     F +A+FL+SCYLC K LHGLDIF
Sbjct: 121 VYFNGELDLVNGRSSNIVRSGVFSTSPMS-FGVAERGFCAAEFLSSCYLCSKHLHGLDIF 179

Query: 589 MYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCS 720
           MYRG+KAFCS ECR K I  D+ R  KC S A+K  DYS SPCS
Sbjct: 180 MYRGEKAFCSVECRDKHIRGDDCRD-KCGSKAMK--DYSASPCS 220


>ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|222873621|gb|EEF10752.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  138 bits (347), Expect = 3e-30
 Identities = 99/242 (40%), Positives = 137/242 (56%), Gaps = 27/242 (11%)
 Frame = +1

Query: 112 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYG--VVGLGIVAAMNDAHQDVISSVKTTTK 285
           KRP I+LSLFT  ++     N  KSPRNF+ G   VGLGIVAAM+++  D +S    + +
Sbjct: 4   KRPRISLSLFTTLTETFSMAN--KSPRNFKNGGSAVGLGIVAAMDES--DKVSDFALSPR 59

Query: 286 LDKMSKSEPIPIV-LSKPV------------VEKDEVM--ELSESYTCVVSNLGHG--RK 414
                 S P+P+V L KP              +K  V+  E  ESYTCV+S++G+   +K
Sbjct: 60  ------SSPVPVVSLKKPASCFKEGGIGVWNFDKGGVVVDENDESYTCVISHVGNNVIKK 113

Query: 415 KEYFDDERISGKSGYR--GGGVFFTS------PLKDTGQGIMLFQSADFLTSCYLCKKKL 570
             Y+DD+       +   G G+ + +      P+         F S DFL+SC+LCKK L
Sbjct: 114 SVYYDDKVCVDSVSWFDVGSGLLYAASPAVMMPIDVATAERREFWSKDFLSSCHLCKKLL 173

Query: 571 HGLDIFMYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCSAPRIFSAGVA 750
            GLDIFMYRG+ AFCS ECR K I  ++ ++K   S A K  + S++PCS+P +F AGVA
Sbjct: 174 EGLDIFMYRGENAFCSPECRDKHIRIEDFKEKS-GSEARKKQECSVTPCSSPLLFFAGVA 232

Query: 751 AA 756
           AA
Sbjct: 233 AA 234


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