BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012452
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   650   0.0  
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   648   0.0  
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   596   e-168
ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containi...   592   e-167
ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ...   587   e-165

>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  650 bits (1676), Expect = 0.0
 Identities = 307/434 (70%), Positives = 371/434 (85%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC VNE+DSACALLK MTRHGCVPN+IVYQTLIHALSK GRV+E LKLLEEM LM C+P
Sbjct: 244  ALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIP 303

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DV+TFND +HGLC++ RIHEAAKLVDRML+RGF P++ TYG+LM+GLC  G+VDEA+ LL
Sbjct: 304  DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 942  TKIPDPNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFL 763
             K+P+PNVVLFNTLINGY+  G+ ++AK+VM+E ML +GC PDIFTYN+LILGLCK G+L
Sbjct: 364  NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 423

Query: 762  GSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCV 583
             SA EL+ EM +KG +PNV++YTIL++ FCK GRL++A + L+E+S KGL LNAVG+NC+
Sbjct: 424  VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 483

Query: 582  IHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGV 403
            I ALCKD KV  A+ M   MSS GCKPDI+TFNS+I+GLCK ++  EALG+YQDM+LEGV
Sbjct: 484  ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543

Query: 402  IANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLG 223
            IAN++TYNTLIHAF+R G +Q ALKL+N+M+FRGCPLD ITYNGL+K LCR G +EKGL 
Sbjct: 544  IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 603

Query: 222  LLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLC 43
            L E+M  KG+ PNN+SCNILINGLCRTG IQ ALE LRDM+H+GLTPDIVTYNSLINGLC
Sbjct: 604  LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 663

Query: 42   KLERLREAMNLLDK 1
            K  R +EA+NL DK
Sbjct: 664  KTGRAQEALNLFDK 677



 Score =  244 bits (623), Expect = 4e-62
 Identities = 142/438 (32%), Positives = 245/438 (55%), Gaps = 6/438 (1%)
 Frame = -1

Query: 1299 LCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEM-FLMSCVP 1123
            L +  E  +  ALL +M + G V    ++  ++    +AG   +A +LL +M  + SC P
Sbjct: 139  LGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEP 198

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
               ++N +L  L   +       +   ML +G +P+  T+G++M  LC   +VD A ALL
Sbjct: 199  TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 258

Query: 942  TKIPD----PNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCK 775
              +      PN +++ TLI+   K G+  +   ++ E ML MGC PD+ T+N  I GLCK
Sbjct: 259  KDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEE-MLLMGCIPDVNTFNDAIHGLCK 317

Query: 774  LGFLGSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVG 595
            +  +  A++L+  M+++G  PN  +Y +L+ G C++G++D+A   L ++       N V 
Sbjct: 318  MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVL 373

Query: 594  FNCVIHALCKDGKVDQAMK-MCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDM 418
            FN +I+     G++D+A   M + M SVGC PDI+T+N++I GLCK   +  A  +  +M
Sbjct: 374  FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 417  VLEGVIANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAV 238
             ++G   N +TY  LI  F + G L+ A  +++EM  +G  L+ + YN L+  LC++  V
Sbjct: 434  QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 237  EKGLGLLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSL 58
            +  L +  +M  KG  P+  + N LI GLC+  + + AL L +DM+ +G+  + +TYN+L
Sbjct: 494  QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 57   INGLCKLERLREAMNLLD 4
            I+   +   ++EA+ L++
Sbjct: 554  IHAFLRRGAMQEALKLVN 571



 Score =  184 bits (467), Expect = 4e-44
 Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 36/368 (9%)
 Frame = -1

Query: 1005 YGMLMNGLCNKGQVDEAKALLTKIPDPNVV----LFNTLINGYIKTGQFEKAKSVMYEFM 838
            Y ML++ L   G+     ALL ++    +V    LF  ++  Y + G   +A  ++ +  
Sbjct: 132  YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 191

Query: 837  LPMGCEPDIFTYNSLILGLCKLGFLGSASELLREMIMKGVKPNVVSYTILVEGFCKVGRL 658
                CEP   +YN ++  L           +  EM+ KG+ P V ++ ++++  C V  +
Sbjct: 192  GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 251

Query: 657  DKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSV 478
            D A   L++++  G   NA+ +  +IHAL K G+V++ +K+ ++M  +GC PD+ TFN  
Sbjct: 252  DSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 311

Query: 477  IYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLIHAFMRNGILQVALKLMNE------ 316
            I+GLCK  R+ EA  +   M+L G   NS TY  L+H   R G +  A  L+N+      
Sbjct: 312  IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV 371

Query: 315  --------------------------MVFRGCPLDVITYNGLLKELCREGAVEKGLGLLE 214
                                      M+  GC  D+ TYN L+  LC++G +     L+ 
Sbjct: 372  VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 213  EMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLE 34
            EM+ KG  PN ++  ILI+  C+ GR++ A  +L +M  +GL  + V YN LI+ LCK E
Sbjct: 432  EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 33   RLREAMNL 10
            ++++A+N+
Sbjct: 492  KVQDALNM 499



 Score =  100 bits (248), Expect = 1e-18
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC    ++   AL + M   G  PN+I    LI+ L + G +  AL+ L +M      P
Sbjct: 591  ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTP 650

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            D+ T+N +++GLC+  R  EA  L D++ + G  P A+TY  L++  C +G  D+A  LL
Sbjct: 651  DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 710

Query: 942  TKIPD----PNVVLFNTLINGYIKTGQFE 868
            ++  D    PN V +  L++ +IK G  E
Sbjct: 711  SRGVDSGFIPNEVTWYILVSNFIKEGDQE 739


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  648 bits (1671), Expect = 0.0
 Identities = 306/434 (70%), Positives = 370/434 (85%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC VNE+DSACALLK MTRHGCVPN+IVYQTLIHAL K GRV+E LKLLEEM LM C+P
Sbjct: 226  ALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIP 285

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DV+TFND +HGLC++ RIHEAAKLVDRML+RGF P++ TYG+LM+GLC  G+VDEA+ LL
Sbjct: 286  DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 942  TKIPDPNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFL 763
             K+P+PNVVLFNTLINGY+  G+ ++AK+VM+E ML +GC PDIFTYN+LILGLCK G+L
Sbjct: 346  NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 405

Query: 762  GSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCV 583
             SA EL+ EM +KG +PNV++YTIL++ FCK GRL++A + L+E+S KGL LNAVG+NC+
Sbjct: 406  VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 465

Query: 582  IHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGV 403
            I ALCKD KV  A+ M   MSS GCKPDI+TFNS+I+GLCK ++  EALG+YQDM+LEGV
Sbjct: 466  ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525

Query: 402  IANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLG 223
            IAN++TYNTLIHAF+R G +Q ALKL+N+M+FRGCPLD ITYNGL+K LCR G +EKGL 
Sbjct: 526  IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 585

Query: 222  LLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLC 43
            L E+M  KG+ PNN+SCNILINGLCRTG IQ ALE LRDM+H+GLTPDIVTYNSLINGLC
Sbjct: 586  LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 645

Query: 42   KLERLREAMNLLDK 1
            K  R +EA+NL DK
Sbjct: 646  KTGRAQEALNLFDK 659



 Score =  244 bits (623), Expect = 4e-62
 Identities = 142/438 (32%), Positives = 245/438 (55%), Gaps = 6/438 (1%)
 Frame = -1

Query: 1299 LCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEM-FLMSCVP 1123
            L +  E  +  ALL +M + G V    ++  ++    +AG   +A +LL +M  + SC P
Sbjct: 121  LGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEP 180

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
               ++N +L  L   +       +   ML +G +P+  T+G++M  LC   +VD A ALL
Sbjct: 181  TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 240

Query: 942  TKIPD----PNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCK 775
              +      PN +++ TLI+   K G+  +   ++ E ML MGC PD+ T+N  I GLCK
Sbjct: 241  KDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE-MLLMGCIPDVNTFNDAIHGLCK 299

Query: 774  LGFLGSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVG 595
            +  +  A++L+  M+++G  PN  +Y +L+ G C++G++D+A   L ++       N V 
Sbjct: 300  MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVL 355

Query: 594  FNCVIHALCKDGKVDQAMK-MCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDM 418
            FN +I+     G++D+A   M + M SVGC PDI+T+N++I GLCK   +  A  +  +M
Sbjct: 356  FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 417  VLEGVIANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAV 238
             ++G   N +TY  LI  F + G L+ A  +++EM  +G  L+ + YN L+  LC++  V
Sbjct: 416  QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 237  EKGLGLLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSL 58
            +  L +  +M  KG  P+  + N LI GLC+  + + AL L +DM+ +G+  + +TYN+L
Sbjct: 476  QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 57   INGLCKLERLREAMNLLD 4
            I+   +   ++EA+ L++
Sbjct: 536  IHAFLRRGAMQEALKLVN 553



 Score =  184 bits (466), Expect = 6e-44
 Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 36/368 (9%)
 Frame = -1

Query: 1005 YGMLMNGLCNKGQVDEAKALLTKIPDPNVV----LFNTLINGYIKTGQFEKAKSVMYEFM 838
            Y ML++ L   G+     ALL ++    +V    LF  ++  Y + G   +A  ++ +  
Sbjct: 114  YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 173

Query: 837  LPMGCEPDIFTYNSLILGLCKLGFLGSASELLREMIMKGVKPNVVSYTILVEGFCKVGRL 658
                CEP   +YN ++  L           +  EM+ KG+ P V ++ ++++  C V  +
Sbjct: 174  GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 233

Query: 657  DKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSV 478
            D A   L++++  G   NA+ +  +IHAL K G+V++ +K+ ++M  +GC PD+ TFN  
Sbjct: 234  DSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 293

Query: 477  IYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLIHAFMRNGILQVALKLMNE------ 316
            I+GLCK  R+ EA  +   M+L G   NS TY  L+H   R G +  A  L+N+      
Sbjct: 294  IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV 353

Query: 315  --------------------------MVFRGCPLDVITYNGLLKELCREGAVEKGLGLLE 214
                                      M+  GC  D+ TYN L+  LC++G +     L+ 
Sbjct: 354  VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 213  EMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLE 34
            EM+ KG  PN ++  ILI+  C+ GR++ A  +L +M  +GL  + V YN LI+ LCK E
Sbjct: 414  EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 33   RLREAMNL 10
            ++++A+N+
Sbjct: 474  KVQDALNM 481



 Score =  100 bits (248), Expect = 1e-18
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC    ++   AL + M   G  PN+I    LI+ L + G +  AL+ L +M      P
Sbjct: 573  ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTP 632

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            D+ T+N +++GLC+  R  EA  L D++ + G  P A+TY  L++  C +G  D+A  LL
Sbjct: 633  DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 692

Query: 942  TKIPD----PNVVLFNTLINGYIKTGQFE 868
            ++  D    PN V +  L++ +IK G  E
Sbjct: 693  SRGVDSGFIPNEVTWYILVSNFIKEGDQE 721


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  596 bits (1537), Expect = e-168
 Identities = 273/434 (62%), Positives = 356/434 (82%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC VNE+D+AC+LL+ MT+HGCVPNS+VYQTLIHALSK  RV+EALKLLEEMFLM C+P
Sbjct: 217  ALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLP 276

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DVDTFND+++GLCRL+RIHE AKLVDRML RGF P+ +TYG+LMNGLC  G+VDEA+ LL
Sbjct: 277  DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL 336

Query: 942  TKIPDPNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFL 763
             K+P PN V F  LINGY+K+G+ ++A + +Y+ M+  GC PD+FT+N+LI GLCK G +
Sbjct: 337  NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 762  GSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCV 583
            GSA +++ +M   G  PN+++YT L++GFCK  +L++A   L E+SAKG  LN +G+N +
Sbjct: 397  GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 582  IHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGV 403
            + ALCK+GKV +A+ M  +MS  GCKPDI+TFN++I+GLCK DR  +AL +Y+DM+L+GV
Sbjct: 457  LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 402  IANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLG 223
            IAN+VTYNTLIHAF+R G +Q ALKL+N+M+FRGCPLD ITYNGL+K  C+ GA EK LG
Sbjct: 517  IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALG 576

Query: 222  LLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLC 43
            L +EM +K + P+N+SCN+LINGLCR G++  ALELLRDM+H+GL PD+VTYNSLINGLC
Sbjct: 577  LFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636

Query: 42   KLERLREAMNLLDK 1
            K+  +REA NL +K
Sbjct: 637  KMGNIREAFNLFNK 650



 Score =  249 bits (635), Expect = 1e-63
 Identities = 144/426 (33%), Positives = 238/426 (55%), Gaps = 6/426 (1%)
 Frame = -1

Query: 1263 LLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMF-LMSCVPDVDTFNDILHGL 1087
            LL ++   G      ++  ++    +A    +A ++L +M  +  C P   ++N +L  L
Sbjct: 124  LLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDIL 183

Query: 1086 CRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALLTKIPD----PNV 919
               +    AA +   ML +G  P+  T+G++M  LC   +VD A +LL  +      PN 
Sbjct: 184  VSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNS 243

Query: 918  VLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFLGSASELLR 739
            V++ TLI+   K  +  +A  ++ E  L MGC PD+ T+N +I GLC+L  +   ++L+ 
Sbjct: 244  VVYQTLIHALSKRDRVNEALKLLEEMFL-MGCLPDVDTFNDVIYGLCRLNRIHEGAKLVD 302

Query: 738  EMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDG 559
             M+ +G  PN ++Y +L+ G C+VG++D+A   L ++       N V F  +I+   K G
Sbjct: 303  RMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP----NDVHFTILINGYVKSG 358

Query: 558  KVDQAMK-MCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTY 382
            ++D+A   + DKM   GC+PD++TFN++I+GLCK   M  A+ +  DM   G   N +TY
Sbjct: 359  RLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITY 418

Query: 381  NTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLGLLEEMRQ 202
             TL+  F +   L+ A  ++NEM  +G  L+++ YN LL+ LC+ G V K L +L EM  
Sbjct: 419  TTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSD 478

Query: 201  KGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLERLRE 22
            KG  P+  + N LI GLC+  R + AL L RDM+  G+  + VTYN+LI+   +   ++E
Sbjct: 479  KGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQE 538

Query: 21   AMNLLD 4
            A+ L++
Sbjct: 539  ALKLVN 544



 Score =  205 bits (521), Expect = 2e-50
 Identities = 131/401 (32%), Positives = 205/401 (51%), Gaps = 44/401 (10%)
 Frame = -1

Query: 1299 LCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLL-EEMFLMSCVP 1123
            LC V ++D A  LL K+      PN + +  LI+   K+GR+DEA   L ++M    C P
Sbjct: 323  LCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRP 378

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DV TFN ++HGLC+   +  A  +V+ M   G  P+ +TY  L++G C K Q++EA  +L
Sbjct: 379  DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVL 438

Query: 942  TKIP----DPNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCK 775
             ++     + N++ +N L+    K G+  KA  ++ E M   GC+PDIFT+N+LI GLCK
Sbjct: 439  NEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE-MSDKGCKPDIFTFNTLIFGLCK 497

Query: 774  LGFLGSASELLREMIMKGVKPNVVSYTILV------------------------------ 685
            +     A  L R+M++ GV  N V+Y  L+                              
Sbjct: 498  VDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEIT 557

Query: 684  -----EGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQAMKMCDKMS 520
                 + FCK+G  +KA    +E+  K L  + +  N +I+ LC+ GKV  A+++   M 
Sbjct: 558  YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617

Query: 519  SVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLIHAFMRNGILQ 340
              G  PD+ T+NS+I GLCK   + EA  ++  +  EG+  +++TYNTLI    R G+  
Sbjct: 618  HRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFD 677

Query: 339  VA-LKLMNEMVFRGCPLDVITY---NGLLKELCREGAVEKG 229
             A L L+  +     P DV  Y   +  +KE+ +E  +  G
Sbjct: 678  DAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISFG 718



 Score =  166 bits (419), Expect = 2e-38
 Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 71/412 (17%)
 Frame = -1

Query: 1032 RGFNPSAVTYGMLMNGLCNKGQVDEAKALLTKIPDPNVV----LFNTLINGYIKTGQFEK 865
            +G+  +   Y +L++ L    +      LL +I +  +     LF  ++  Y +     +
Sbjct: 96   KGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQ 155

Query: 864  AKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFLGSASELLREMIMKGVKPNVVSYTILV 685
            A  ++ +      CEP   +YN ++  L        A+ +  EM+ KGV P V ++ +++
Sbjct: 156  ATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVM 215

Query: 684  EGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQAMKMCDKMSSVGCK 505
            +  C V  +D A   L +++  G   N+V +  +IHAL K  +V++A+K+ ++M  +GC 
Sbjct: 216  KALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCL 275

Query: 504  PDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLIHAFMRNGILQVALKL 325
            PD+ TFN VIYGLC+ +R+ E   +   M+  G   N +TY  L++   R G +  A  L
Sbjct: 276  PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335

Query: 324  MN--------------------------------EMVFRGCPLDVITYNGLLKELCREGA 241
            +N                                +M+  GC  DV T+N L+  LC++G 
Sbjct: 336  LNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGL 395

Query: 240  VEKGLGLLEEMRQKGVAPNNVS-----------------------------------CNI 166
            +   + ++ +M   G  PN ++                                    N+
Sbjct: 396  MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNV 455

Query: 165  LINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLERLREAMNL 10
            L+  LC+ G++  AL++L +M  +G  PDI T+N+LI GLCK++R  +A+ L
Sbjct: 456  LLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALAL 507



 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 4/144 (2%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            A C +   + A  L  +M R   VP++I    LI+ L + G+V  AL+LL +M      P
Sbjct: 564  AFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAP 623

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DV T+N +++GLC++  I EA  L +++   G  P A+TY  L+   C  G  D+A  LL
Sbjct: 624  DVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL 683

Query: 942  TKIPD----PNVVLFNTLINGYIK 883
             +  +    PN V +  L++ +IK
Sbjct: 684  LRGVENAFIPNDVTWYILVSNFIK 707


>ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Glycine max]
          Length = 725

 Score =  592 bits (1525), Expect = e-167
 Identities = 278/434 (64%), Positives = 355/434 (81%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC V+E+DSAC+LL+ M +HGCVPNS++YQTLIHAL +  RV EAL+LLE+MFLM C P
Sbjct: 214  ALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEP 273

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DV TFND++HGLCR  RIHEAAKL+DRML+RGF+  A+TYG LM+GLC  GQVDEA+ALL
Sbjct: 274  DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333

Query: 942  TKIPDPNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFL 763
             KIP+PN VL+NTLI+GY+ +G+FE+AK ++Y  M+  G EPD +T+N +I GL K G+L
Sbjct: 334  NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393

Query: 762  GSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCV 583
             SA ELL EM+ K  +PNV++YTIL+ GFCK GRL++A++ +  +SAKGL LN VG+NC+
Sbjct: 394  VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCL 453

Query: 582  IHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGV 403
            I ALCKDG +++A+++  +MS  GCKPDIYTFNS+I GLCK  +M EAL +Y DM LEGV
Sbjct: 454  ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513

Query: 402  IANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLG 223
            IAN+VTYNTL+HAF+    +Q A KL++EM+FRGCPLD ITYNGL+K LC+ GAVEKGLG
Sbjct: 514  IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573

Query: 222  LLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLC 43
            L EEM  KG+ P  +SCNILI+GLCRTG++  AL+ L+DM+H+GLTPDIVTYNSLINGLC
Sbjct: 574  LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633

Query: 42   KLERLREAMNLLDK 1
            K+  ++EA NL +K
Sbjct: 634  KMGHVQEASNLFNK 647



 Score =  234 bits (598), Expect = 3e-59
 Identities = 140/427 (32%), Positives = 237/427 (55%), Gaps = 6/427 (1%)
 Frame = -1

Query: 1263 LLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMF-LMSCVPDVDTFNDILHGL 1087
            LLK+M   G +    ++  ++    KAG   +A +LL +M+ + SC P   ++N +L  L
Sbjct: 121  LLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDIL 180

Query: 1086 CRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALLTKIPD----PNV 919
               D    A  +   ML RG +P+  T+G++M  LC   +VD A +LL  +      PN 
Sbjct: 181  VDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNS 240

Query: 918  VLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFLGSASELLR 739
            V++ TLI+   +  +  +A  ++ E M  M CEPD+ T+N +I GLC+ G +  A++LL 
Sbjct: 241  VIYQTLIHALCENNRVSEALQLL-EDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLD 299

Query: 738  EMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDG 559
             M+++G   + ++Y  L+ G C++G++D+A   L +I       N V +N +I      G
Sbjct: 300  RMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASG 355

Query: 558  KVDQAMKMC-DKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTY 382
            + ++A  +  + M   G +PD YTFN +I GL K   +  AL +  +MV +    N +TY
Sbjct: 356  RFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITY 415

Query: 381  NTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLGLLEEMRQ 202
              LI+ F + G L+ A +++N M  +G  L+ + YN L+  LC++G +E+ L L  EM  
Sbjct: 416  TILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSG 475

Query: 201  KGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLERLRE 22
            KG  P+  + N LINGLC+  +++ AL L  DM  +G+  + VTYN+L++     + +++
Sbjct: 476  KGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQ 535

Query: 21   AMNLLDK 1
            A  L+D+
Sbjct: 536  AFKLVDE 542



 Score =  169 bits (428), Expect = 1e-39
 Identities = 103/348 (29%), Positives = 185/348 (53%), Gaps = 5/348 (1%)
 Frame = -1

Query: 1032 RGFNPSAVTYGMLMNGLCNKGQVDEAKALLTKIPDPNVV----LFNTLINGYIKTGQFEK 865
            +G++ +     +L++ L   G     + LL ++ D  ++    LF  ++  Y K G   +
Sbjct: 93   KGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQ 152

Query: 864  AKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFLGSASELLREMIMKGVKPNVVSYTILV 685
            A  ++ +      C+P   +YN ++  L        A  +  +M+ +GV P V ++ +++
Sbjct: 153  ATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVM 212

Query: 684  EGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQAMKMCDKMSSVGCK 505
            +  C V  +D A   L +++  G   N+V +  +IHALC++ +V +A+++ + M  + C+
Sbjct: 213  KALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272

Query: 504  PDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLIHAFMRNGILQVALKL 325
            PD+ TFN VI+GLC+A R+ EA  +   M+L G   +++TY  L+H   R G +  A  L
Sbjct: 273  PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332

Query: 324  MNEMVFRGCPLDVITYNGLLKELCREGAVEKGLGLL-EEMRQKGVAPNNVSCNILINGLC 148
            +N++       + + YN L+      G  E+   LL   M   G  P+  + NI+I+GL 
Sbjct: 333  LNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLV 388

Query: 147  RTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLERLREAMNLLD 4
            + G + +ALELL +MV +   P+++TY  LING CK  RL EA  +++
Sbjct: 389  KKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVN 436



 Score =  101 bits (252), Expect = 4e-19
 Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
 Frame = -1

Query: 726 KGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQ 547
           KG      +  +L++    VG        L+++  +GL      F  ++    K G   Q
Sbjct: 93  KGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQ 152

Query: 546 AMKMCDKMSSV-GCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLI 370
           A ++   M  V  C P   ++N V+  L   D    A  V+ DM+  GV     T+  ++
Sbjct: 153 ATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVM 212

Query: 369 HAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLGLLEEMRQKGVA 190
            A      +  A  L+ +M   GC  + + Y  L+  LC    V + L LLE+M      
Sbjct: 213 KALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272

Query: 189 PNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLERLREAMNL 10
           P+  + N +I+GLCR GRI  A +LL  M+ +G + D +TY  L++GLC++ ++ EA  L
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332

Query: 9   LDK 1
           L+K
Sbjct: 333 LNK 335



 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC    ++    L ++M   G  P  I    LI  L + G+V++ALK L++M      P
Sbjct: 561  ALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTP 620

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            D+ T+N +++GLC++  + EA+ L +++   G  P A+TY  L++  C++G  ++A  LL
Sbjct: 621  DIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLL 680

Query: 942  TKIPD----PNVVLFNTLINGYIK 883
             K  D    PN V ++ LIN  +K
Sbjct: 681  YKGVDSGFIPNEVTWSILINYIVK 704


>ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
            gi|355518643|gb|AET00267.1| Auxin response factor
            [Medicago truncatula]
          Length = 948

 Score =  587 bits (1512), Expect = e-165
 Identities = 279/433 (64%), Positives = 352/433 (81%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            A C VNE+DSAC+LL+ MT+HGCVPNSI+YQ LIHALS+  RV+EA+KLLEEMFLM C P
Sbjct: 209  AFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEP 268

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            DV TFND++HGLC+  RIHEAAKL DRML+R F   A+  G LM+GLC  G+VDEA+A+L
Sbjct: 269  DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAML 328

Query: 942  TKIPDPNVVLFNTLINGYIKTGQFEKAKSVMYEFMLPMGCEPDIFTYNSLILGLCKLGFL 763
            +KIP+PN VL+NTLINGY+ +G+FE+AK ++Y+ M+  G EPD FT+N +I GLCK G+L
Sbjct: 329  SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYL 388

Query: 762  GSASELLREMIMKGVKPNVVSYTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCV 583
             SA E L EM+ KG +PNV++YTIL++GFCK G  ++AS  +  +SAKGL LN VG+NC+
Sbjct: 389  VSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCL 448

Query: 582  IHALCKDGKVDQAMKMCDKMSSVGCKPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGV 403
            I ALCKDGK+  A++M  +MSS GCKPDIYTFNS+IYGLCK D+M EALG+Y+DM+LEGV
Sbjct: 449  IGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGV 508

Query: 402  IANSVTYNTLIHAFMRNGILQVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLG 223
            IAN+VTYNTLIHAF+R  ++Q A KL+ EM FRGCPLD ITYNGL+K LC+ GA EK LG
Sbjct: 509  IANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLG 568

Query: 222  LLEEMRQKGVAPNNVSCNILINGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLC 43
            L+E+M  + + P+  SCNILIN  CRTG++  AL+ LRDM+ +GLTPDIVTYNSLINGLC
Sbjct: 569  LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628

Query: 42   KLERLREAMNLLD 4
            K+ R +EA+NL +
Sbjct: 629  KMGRFQEALNLFN 641



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
 Frame = -1

Query: 699 YTILVEGFCKVGRLDKASDALEEISAKGLGLNAVGFNCVIHALCKDGKVDQAMKMCDKMS 520
           Y +L++    VG        L+++  +G       F  ++    K G   QA ++   M 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 519 SVGC-KPDIYTFNSVIYGLCKADRMTEALGVYQDMVLEGVIANSVTYNTLIHAFMRNGIL 343
            V C +P   ++N V+  L   +    A  V+ DM+  G+     T+  ++ AF     +
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216

Query: 342 QVALKLMNEMVFRGCPLDVITYNGLLKELCREGAVEKGLGLLEEMRQKGVAPNNVSCNIL 163
             A  L+ +M   GC  + I Y  L+  L     V + + LLEEM   G  P+  + N +
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276

Query: 162 INGLCRTGRIQTALELLRDMVHQGLTPDIVTYNSLINGLCKLERLREAMNLLDK 1
           I+GLC+ GRI  A +L   M+ +  T D +    L++GLC++ ++ EA  +L K
Sbjct: 277 IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSK 330



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
 Frame = -1

Query: 1302 ALCSVNELDSACALLKKMTRHGCVPNSIVYQTLIHALSKAGRVDEALKLLEEMFLMSCVP 1123
            ALC     +    L+++M      P+      LI++  + G+V++AL+ L +M      P
Sbjct: 556  ALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTP 615

Query: 1122 DVDTFNDILHGLCRLDRIHEAAKLVDRMLIRGFNPSAVTYGMLMNGLCNKGQVDEAKALL 943
            D+ T+N +++GLC++ R  EA  L + +  +G +P AVTY  L++  C +G  ++A  LL
Sbjct: 616  DIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675

Query: 942  TKIPD----PNVVLFNTLINGYIK 883
             K       PN + ++ LIN ++K
Sbjct: 676  FKGVSNGFIPNEITWSILINYFVK 699