BLASTX nr result

ID: Coptis25_contig00012451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012451
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35134.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_002272168.1| PREDICTED: golgin candidate 6-like [Vitis vi...   104   9e-21
ref|XP_002521485.1| vesicle docking protein P115, putative [Rici...   103   1e-20
ref|XP_002298552.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003554992.1| PREDICTED: golgin candidate 6-like [Glycine ...    96   2e-18

>emb|CBI35134.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/81 (69%), Positives = 64/81 (79%)
 Frame = -1

Query: 329 LLELVXXXSETVFIRGLSAVILGECVLCNKSDDNGMDAFKVVDAISQKIGLASYFLKFDE 150
           LLELV   S TV IRGL+AV+LGECVL NKS ++G DAF +VD+ISQK+GL SYFLKFDE
Sbjct: 548 LLELVSNPSATVCIRGLTAVLLGECVLYNKSSESGKDAFTIVDSISQKVGLTSYFLKFDE 607

Query: 149 M*KSFLFLSAKASQHCKLLAR 87
           M KSFLF SAK +Q  K L R
Sbjct: 608 MQKSFLFSSAKPAQPRKALTR 628


>ref|XP_002272168.1| PREDICTED: golgin candidate 6-like [Vitis vinifera]
          Length = 915

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/81 (69%), Positives = 64/81 (79%)
 Frame = -1

Query: 329 LLELVXXXSETVFIRGLSAVILGECVLCNKSDDNGMDAFKVVDAISQKIGLASYFLKFDE 150
           LLELV   S TV IRGL+AV+LGECVL NKS ++G DAF +VD+ISQK+GL SYFLKFDE
Sbjct: 557 LLELVSNPSATVCIRGLTAVLLGECVLYNKSSESGKDAFTIVDSISQKVGLTSYFLKFDE 616

Query: 149 M*KSFLFLSAKASQHCKLLAR 87
           M KSFLF SAK +Q  K L R
Sbjct: 617 MQKSFLFSSAKPAQPRKALTR 637


>ref|XP_002521485.1| vesicle docking protein P115, putative [Ricinus communis]
           gi|223539384|gb|EEF40975.1| vesicle docking protein
           P115, putative [Ricinus communis]
          Length = 911

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/109 (53%), Positives = 71/109 (65%)
 Frame = -1

Query: 329 LLELVXXXSETVFIRGLSAVILGECVLCNKSDDNGMDAFKVVDAISQKIGLASYFLKFDE 150
           LLELV   S TV IRGL+AV+LGECV+ NKS ++G DAF VVDAISQK+GL S+FLKFDE
Sbjct: 550 LLELVSNPSATVCIRGLAAVLLGECVIYNKSSESGKDAFAVVDAISQKVGLTSFFLKFDE 609

Query: 149 M*KSFLFLSAKASQHCKLLARXXXXXXXXXXXXXXXXAIDPKHDEDPVL 3
           M KSFLF S K ++  K L R                  D K+++ P+L
Sbjct: 610 MMKSFLFSSVKPAEPHKPLTRSAAASMTEIEDVDEQDPSDQKNEDHPIL 658


>ref|XP_002298552.1| predicted protein [Populus trichocarpa] gi|222845810|gb|EEE83357.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/109 (54%), Positives = 71/109 (65%)
 Frame = -1

Query: 329 LLELVXXXSETVFIRGLSAVILGECVLCNKSDDNGMDAFKVVDAISQKIGLASYFLKFDE 150
           LLELV   S T+ IRGL AV+LGECV+ NKS ++G DAF VVDAISQKIGL SYFLKFDE
Sbjct: 556 LLELVSNPSATMCIRGLGAVLLGECVIYNKSGESGKDAFTVVDAISQKIGLTSYFLKFDE 615

Query: 149 M*KSFLFLSAKASQHCKLLARXXXXXXXXXXXXXXXXAIDPKHDEDPVL 3
           M KSFLF S K ++  K L R                + D K+++ P+L
Sbjct: 616 MMKSFLFSSVKPTKLHKPLTRSAAASMAEIDDVDEQDSSDHKNEDHPIL 664


>ref|XP_003554992.1| PREDICTED: golgin candidate 6-like [Glycine max]
          Length = 914

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/81 (64%), Positives = 61/81 (75%)
 Frame = -1

Query: 329 LLELVXXXSETVFIRGLSAVILGECVLCNKSDDNGMDAFKVVDAISQKIGLASYFLKFDE 150
           LLELV   SETV IRG +AV+LGECV+ NKS D G DAF +VD ISQKIGL+SYFLKFDE
Sbjct: 555 LLELVSNSSETVCIRGFAAVVLGECVIYNKSTDRGKDAFAIVDTISQKIGLSSYFLKFDE 614

Query: 149 M*KSFLFLSAKASQHCKLLAR 87
           M KS +F S ++S   +  AR
Sbjct: 615 MQKSSIFSSLESSLTHRSFAR 635


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