BLASTX nr result

ID: Coptis25_contig00012439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012439
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67198.1| hypothetical protein VITISV_001853 [Vitis vinifera]   107   3e-21
ref|XP_003534897.1| PREDICTED: uncharacterized protein LOC100780...   104   2e-20
gb|AFK38154.1| unknown [Lotus japonicus]                              104   3e-20
ref|XP_003546424.1| PREDICTED: uncharacterized protein LOC100810...   103   4e-20
ref|XP_003543509.1| PREDICTED: uncharacterized protein LOC100785...   100   6e-19

>emb|CAN67198.1| hypothetical protein VITISV_001853 [Vitis vinifera]
          Length = 190

 Score =  107 bits (267), Expect = 3e-21
 Identities = 66/162 (40%), Positives = 92/162 (56%), Gaps = 14/162 (8%)
 Frame = -3

Query: 712 IRVVHLNGYIENFEDPITAKQVTGNLPKHFICTMTQLL-LGLKPIRPEVQLEPGCIYFLL 536
           IRVVHLNGY+E F+ P+T  QVTG  P HF+CT  QL+ +G KP++P+ QLEPG +YFLL
Sbjct: 16  IRVVHLNGYVEEFDPPVTVSQVTGKPPLHFVCTPAQLISVGSKPLKPDTQLEPGHVYFLL 75

Query: 535 PYSVLGPDISSGDMVXXXXXXXXXAKRSRSCSKQVQEAV-RNPI-TSKGYAKVVSTNCEF 362
           P+S+   ++S  D+          AK +R  +K        +P+ T+   A+  S N  F
Sbjct: 76  PFSMFHFEVSPMDLTSIASKLTAIAKSARCEAKSPGPGFSASPMRTASSPARNPSPN-HF 134

Query: 361 SPRPSKV-----------QNSSKVRTWKPILDAIIEKSMEHR 269
           S +  +V           Q S K R+WKP+LD I E+S   R
Sbjct: 135 SDQNMRVEMAAGDGVYGGQRSCKSRSWKPLLDPIRERSFNRR 176


>ref|XP_003534897.1| PREDICTED: uncharacterized protein LOC100780386 [Glycine max]
          Length = 181

 Score =  104 bits (260), Expect = 2e-20
 Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
 Frame = -3

Query: 712 IRVVHLNGYIENFEDPITAKQVTGNLPKHFICTMTQLLLGL-KPIRPEVQLEPGCIYFLL 536
           +R+VHL+GY+E+FE+PI+  QVTG  PKHF+CT  QLL    KP+  + QL+PG +YF+L
Sbjct: 16  VRLVHLSGYVEDFENPISVSQVTGTPPKHFVCTSVQLLSSCSKPLNGDTQLQPGNVYFML 75

Query: 535 PYSVLGPDISSGDMVXXXXXXXXXAK-RSRSCSKQVQEAVRNPITSKGYAKVVSTN---- 371
           PYS+L  D+S  D+          AK RSR    +   ++++   S       S +    
Sbjct: 76  PYSILQADVSPVDLASLAKRLTAIAKTRSRKLEGKKSSSLKDGSFSSNVWSSPSRSPGRL 135

Query: 370 ---CEFSPRPSKVQNSSKVRTWKPILDAIIEKSMEHR 269
               E    P    +  +VR WKPILD I EKS   R
Sbjct: 136 GGVVEQIGMPYGGPSPCRVRPWKPILDTIREKSFNRR 172


>gb|AFK38154.1| unknown [Lotus japonicus]
          Length = 190

 Score =  104 bits (259), Expect = 3e-20
 Identities = 66/166 (39%), Positives = 93/166 (56%), Gaps = 18/166 (10%)
 Frame = -3

Query: 712 IRVVHLNGYIENFEDPITAKQVTGNL---PKHFICTMTQLLLGL-KPIRPEVQLEPGCIY 545
           +R+VHL+GY+E+FE PI+  QVTGN      HF+CT  QLL    K ++ + QL+PG +Y
Sbjct: 19  VRLVHLSGYVEDFEQPISVSQVTGNSGNPTSHFVCTSVQLLSSCSKSLKGDTQLQPGNVY 78

Query: 544 FLLPYSVLGPDISSGDMVXXXXXXXXXAK-RSRSCSKQVQEAVRNPITSK-GYAKVVSTN 371
           F+LPYS+L PD+S  D+          AK R RSC +  +    +P+ S+ G + V S+ 
Sbjct: 79  FMLPYSILQPDVSPVDLASLAKRLTSIAKTRRRSCDEDKKSLKASPLASQIGLSNVWSSP 138

Query: 370 CEFSPRPSKV------------QNSSKVRTWKPILDAIIEKSMEHR 269
              S  P +V            ++ S VR WKPIL  I EKS+  R
Sbjct: 139 ---SRSPGRVGVAEEIGLAYGGRSVSGVRPWKPILGTIREKSLNRR 181


>ref|XP_003546424.1| PREDICTED: uncharacterized protein LOC100810460 [Glycine max]
          Length = 178

 Score =  103 bits (257), Expect = 4e-20
 Identities = 63/158 (39%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
 Frame = -3

Query: 712 IRVVHLNGYIENFEDPITAKQVTGNLPKHFICTMTQLLLGL-KPIRPEVQLEPGCIYFLL 536
           +R+VHL+GY+E+FE+PI+  QVTG   KHF+CT  QLL    KP+  + QL+PG +YF+L
Sbjct: 16  VRLVHLSGYVEDFENPISVSQVTGTPSKHFVCTSVQLLSSCSKPLNGDTQLQPGNVYFML 75

Query: 535 PYSVLGPDISSGDMVXXXXXXXXXAKRSRSCSKQ---------VQEAVRNPITSKGYAKV 383
           PYS+L  D+S  D+          AK SR    +               +P  S G   V
Sbjct: 76  PYSILQTDVSPVDLASLAKRLTAIAKTSRRLDGKKSSLKDGSFSSNVWSSPSRSPGRLGV 135

Query: 382 VSTNCEFSPRPSKVQNSSKVRTWKPILDAIIEKSMEHR 269
           V    E    P   ++  +VR WKPILD I EKS   R
Sbjct: 136 V----EQIGMPYGGRSPCRVRPWKPILDTIREKSFNRR 169


>ref|XP_003543509.1| PREDICTED: uncharacterized protein LOC100785670 [Glycine max]
          Length = 171

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
 Frame = -3

Query: 712 IRVVHLNGYIENFEDPITAKQVTGNLPKHFICTMTQLLLGLK-PIRPEVQLEPGCIYFLL 536
           IRVVHLNGY+E+F+ PI+ +QV G   KHF+CT TQLL      +  +  L+PG +YF+L
Sbjct: 16  IRVVHLNGYVEDFDQPISVRQVIGYPQKHFVCTSTQLLSPCSTSMNGDTHLQPGQVYFML 75

Query: 535 PYSVLGPDISSGDMVXXXXXXXXXAKRSRSCSKQVQEAVRNPITSKGYAKVVSTNCEFSP 356
           PYSVL  D+S  D+          AK S   S Q Q    +P  S G   V     ++  
Sbjct: 76  PYSVLHADVSPVDLAGLAKRLTAIAK-SGPLSSQTQTFWNSPSRSPGRVGVAE---QYGV 131

Query: 355 RPSKV--QNSSKVRTWKPILDAIIEKSMEHR 269
               +  ++ SKV+ WKPILD I EK    R
Sbjct: 132 GMMNIGGKSPSKVQPWKPILDTITEKPFHKR 162


Top