BLASTX nr result

ID: Coptis25_contig00012416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012416
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-41
ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...   165   6e-39
ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   161   7e-38

>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
            predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  172 bits (436), Expect = 4e-41
 Identities = 92/193 (47%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
 Frame = -3

Query: 578  NFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPEFLGGFPLLKLNLSFNQFEGQVPDDGVF 399
            NFFQGS+P S S+LRG++  DLS NNLSG+IP+FL  F LL LNLSFN FEG+VP  G F
Sbjct: 555  NFFQGSIPSSFSTLRGIQKLDLSHNNLSGQIPKFLDTFALLTLNLSFNDFEGEVPTKGAF 614

Query: 398  GNRSSFSLVGNKNLCGGILDLNLPPCT-QKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
            GN ++ S+ GNK LCGGI +L LP C  +K+                             
Sbjct: 615  GNATAISVDGNKKLCGGISELKLPKCNFKKSKKWKIPLWLILLLTIACGFLGVAVVSFVL 674

Query: 221  XCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEELDK 42
                +  +K  S      E   +++Y  LL+ATNGFSS+NLIG G +GSVY+GIL++ D 
Sbjct: 675  LYLSRRKRKEQSSELSLKEPLPKVSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDT 734

Query: 41   VVAVKVLNLQQKG 3
            VVA+KVLNLQ +G
Sbjct: 735  VVAIKVLNLQTRG 747


>ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|222867603|gb|EEF04734.1|
            predicted protein [Populus trichocarpa]
          Length = 970

 Score =  170 bits (431), Expect = 1e-40
 Identities = 91/195 (46%), Positives = 124/195 (63%), Gaps = 2/195 (1%)
 Frame = -3

Query: 581  GNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPEFLGGFPLLK-LNLSFNQFEGQVPDDG 405
            GN F+G +P+SL +LRGLE  DLS NNL+G +PEFLGGF +L+ LNLS N  EG+V  DG
Sbjct: 478  GNKFEGPIPESLETLRGLEELDLSENNLTGRVPEFLGGFSVLRHLNLSHNNLEGEVSRDG 537

Query: 404  VFGNRSSFSLVGNKNLCGGILDLNLPPCTQKT-XXXXXXXXXXXXXXXXXXXXXXXXXXX 228
            +  N S+FS+VGN  LCGGI +L+LPPC++K                             
Sbjct: 538  ILANASAFSVVGNDKLCGGIPELHLPPCSRKNPREPLSFKVVIPATIAAVFISVLLCSLS 597

Query: 227  XXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEEL 48
                RRK+ +   +P+    EQ   ++Y+EL+++TNGF++ENLIG GS+GSVYKGIL   
Sbjct: 598  IFCIRRKLPRNSNTPTP--EEQQVGISYSELIKSTNGFAAENLIGSGSFGSVYKGILSGE 655

Query: 47   DKVVAVKVLNLQQKG 3
              +VA+K++NL QKG
Sbjct: 656  GTIVAIKIMNLLQKG 670


>ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|222865759|gb|EEF02890.1|
            predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  169 bits (427), Expect = 4e-40
 Identities = 91/196 (46%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
 Frame = -3

Query: 578  NFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPEFLGGFPLLKLNLSFNQFEGQVPDDGVF 399
            NFFQGS+P S SSLRG+++ DLS NNLSG++P FL   P + LNLS+N FEG+VP  GVF
Sbjct: 549  NFFQGSIPSSFSSLRGIQFLDLSCNNLSGQLPNFLVTIPFISLNLSYNNFEGEVPRKGVF 608

Query: 398  GNRSSFSLVGNKNLCGGILDLNLPPC----TQKTXXXXXXXXXXXXXXXXXXXXXXXXXX 231
             N S+ S+VGN  LCGGIL+L+LP C     +KT                          
Sbjct: 609  TNESAVSVVGNDKLCGGILELHLPECPNKEPKKTKMSHLQYLLAITIPCALVGAITVSSF 668

Query: 230  XXXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGILEE 51
                 ++K  +K  S  TL  E   +++Y  L +AT+GFS+ NLIGVGS+ SVYKG ++E
Sbjct: 669  LFCWFKKK--RKEHSSDTLLKESFPQISYERLFKATDGFSTTNLIGVGSFSSVYKGRIDE 726

Query: 50   LDKVVAVKVLNLQQKG 3
               +VA+KVLNLQ++G
Sbjct: 727  DGTLVAIKVLNLQRRG 742


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Cucumis sativus]
          Length = 1023

 Score =  165 bits (417), Expect = 6e-39
 Identities = 95/198 (47%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
 Frame = -3

Query: 581  GNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPEFLGGFPLLK-LNLSFNQFEGQVPDDG 405
            GNF +G +P+SLSSLRG+E  DLSRNNLSG+IP +L  F +L  LNLSFN  EG+VP  G
Sbjct: 553  GNFLEGPIPESLSSLRGIEELDLSRNNLSGKIPTYLQEFEVLSYLNLSFNNLEGEVPTQG 612

Query: 404  VFGNRSSFSLVGNKNLCGGILDLNLPPC----TQKTXXXXXXXXXXXXXXXXXXXXXXXX 237
            VF N ++FS++GNK LC GI +LNLP C     +K                         
Sbjct: 613  VFKNTTAFSILGNKKLCNGINELNLPRCRLDYPRKQKLTTKLKIIISVVSGLVGALLIIC 672

Query: 236  XXXXXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGIL 57
                   R+K ++  +SPS   S  +  ++Y +LL+ATN FS +NLIGVG YGSVYKGIL
Sbjct: 673  CLLFFWSRKKKNKSDLSPSLKASYFA--VSYNDLLKATNEFSPDNLIGVGGYGSVYKGIL 730

Query: 56   EELDKVVAVKVLNLQQKG 3
             +   VVAVKV NLQ +G
Sbjct: 731  SQDKSVVAVKVFNLQHRG 748


>ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
            serine/threonine-protein kinase At3g47570-like [Cucumis
            sativus]
          Length = 1023

 Score =  161 bits (408), Expect = 7e-38
 Identities = 94/198 (47%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
 Frame = -3

Query: 581  GNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPEFLGGFPLLK-LNLSFNQFEGQVPDDG 405
            GNF +G +P+SLSSLRG+E  DLSRNNLSG+IP +L  F +L  LNLSFN  EG+VP  G
Sbjct: 553  GNFLEGPIPESLSSLRGIEELDLSRNNLSGKIPTYLQEFEVLSYLNLSFNNLEGEVPTQG 612

Query: 404  VFGNRSSFSLVGNKNLCGGILDLNLPPC----TQKTXXXXXXXXXXXXXXXXXXXXXXXX 237
            VF N ++FS++GNK LC GI +LNLP C     +K                         
Sbjct: 613  VFKNTTAFSILGNKKLCNGINELNLPRCRLDYPRKQKLTTKLKIIISVVSGLVGALLIIC 672

Query: 236  XXXXXXCRRKMSQKHISPSTLFSEQSKRLTYAELLRATNGFSSENLIGVGSYGSVYKGIL 57
                   + + ++  +SPS   S  +  ++Y +LL+ATN FS +NLIGVG YGSVYKGIL
Sbjct: 673  CLLFXLVKEEKNKSDLSPSLKASYFA--VSYNDLLKATNEFSPDNLIGVGGYGSVYKGIL 730

Query: 56   EELDKVVAVKVLNLQQKG 3
             +   VVAVKV NLQ +G
Sbjct: 731  SQDKSVVAVKVFNLQHRG 748


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