BLASTX nr result
ID: Coptis25_contig00012413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012413
(1023 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methy... 148 6e-52
gb|ACN33590.1| unknown [Zea mays] gi|413935528|gb|AFW70079.1| hy... 141 4e-51
gb|EAZ21674.1| hypothetical protein OsJ_05305 [Oryza sativa Japo... 139 6e-51
ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group] g... 139 6e-51
ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [S... 140 3e-50
>ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Vitis vinifera]
Length = 444
Score = 148 bits (373), Expect(2) = 6e-52
Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 5/117 (4%)
Frame = -1
Query: 735 QASLKAEDILYLWPEAEVGLILREYGEESNWNHLQNKIMNAHSYGGLHSTGELVDLVRSM 556
QASL AEDIL WP+ EVG ILREYGEESNW LQNKI+ A +GGLHSTGELVDL+R
Sbjct: 238 QASLTAEDILNSWPDTEVGRILREYGEESNWRSLQNKIVKARLFGGLHSTGELVDLIRKT 297
Query: 555 SPMSK-GRNGWVKT----FYALRIAVNDELNKREHALSACFDCLYFGGRLAVISIIS 400
+P ++ GR GW+KT F ALRIAVNDEL E +L ACF+CL GGRLAVIS S
Sbjct: 298 TPRTRGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYACFECLTPGGRLAVISFHS 354
Score = 83.6 bits (205), Expect(2) = 6e-52
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Frame = -2
Query: 410 LSFHSLEDRILKKLFHDLVNVSEERSR------------VLQLDIDGSEE*TWV*ESING 267
+SFHSLEDRI+K+ F D++N + E + + D E+ W+ + + G
Sbjct: 350 ISFHSLEDRIVKQTFLDIINSNGEDESGEGGGQEGCGKDLRNIRNDNDEKEAWIKQMVQG 409
Query: 266 TDGIILTKQPLTPSEEEERLNQRCRSAKLRVLQK 165
+G ILTK+P+TPSEEEERLN+R RSAKLRV+QK
Sbjct: 410 WNGTILTKRPITPSEEEERLNRRSRSAKLRVIQK 443
>gb|ACN33590.1| unknown [Zea mays] gi|413935528|gb|AFW70079.1| hypothetical protein
ZEAMMB73_571267 [Zea mays]
Length = 436
Score = 141 bits (356), Expect(2) = 4e-51
Identities = 72/116 (62%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
Frame = -1
Query: 735 QASLKAEDILYLWPEAEVGLILREYGEESNWNHLQNKIMNAHSYGGLHSTGELVDLVRSM 556
+A+L+AEDIL WPE E+G ILREYGEESNW +Q +I+ A S GGLHSTG+LV L++ M
Sbjct: 239 KATLRAEDILNSWPELELGRILREYGEESNWQSVQKQIVKARSVGGLHSTGDLVKLIQRM 298
Query: 555 SPMSKGRNGWVKT----FYALRIAVNDELNKREHALSACFDCLYFGGRLAVISIIS 400
+S GR GW+KT F ALRIAVNDEL E +L +CFDCL GGRLAVIS S
Sbjct: 299 CTISSGRQGWIKTSTRVFQALRIAVNDELRVLEDSLHSCFDCLATGGRLAVISFHS 354
Score = 87.4 bits (215), Expect(2) = 4e-51
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Frame = -2
Query: 410 LSFHSLEDRILKKLFHDLV-----NVSEERSRVLQLDIDGSEE*TWV*ESINGTDGIILT 246
+SFHSLEDRI+KK F +L+ N +++ DI+ +E W + + G +G +LT
Sbjct: 350 ISFHSLEDRIVKKTFLELIHGGEANEEDDKDDQALTDIEDGDE-PWSGQRVQGRNGTVLT 408
Query: 245 KQPLTPSEEEERLNQRCRSAKLRVLQK 165
K+P+TPS+EEE+LNQRCRSAKLRV+QK
Sbjct: 409 KRPITPSQEEEKLNQRCRSAKLRVIQK 435
>gb|EAZ21674.1| hypothetical protein OsJ_05305 [Oryza sativa Japonica Group]
Length = 439
Score = 139 bits (350), Expect(2) = 6e-51
Identities = 73/116 (62%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
Frame = -1
Query: 735 QASLKAEDILYLWPEAEVGLILREYGEESNWNHLQNKIMNAHSYGGLHSTGELVDLVRSM 556
+A+LKAEDIL WP+ EVG ILR+YGEESNW LQ +I+ A + GGLHSTGELV L++
Sbjct: 244 KATLKAEDILNSWPDLEVGRILRDYGEESNWQSLQKRIVKARAMGGLHSTGELVKLIQRT 303
Query: 555 SPMSKGRNGWVKT----FYALRIAVNDELNKREHALSACFDCLYFGGRLAVISIIS 400
S GR GW+KT F ALRIAVNDEL E AL ACFDCL GRLAVIS S
Sbjct: 304 CTSSGGRQGWIKTATRVFQALRIAVNDELRTLEDALHACFDCLATDGRLAVISFHS 359
Score = 89.0 bits (219), Expect(2) = 6e-51
Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -2
Query: 410 LSFHSLEDRILKKLFHDLVN---VSEERSRVLQLDIDGSEE*TWV*ESINGTDGIILTKQ 240
+SFHSLEDRI+K+ F +L++ + ++ ++ DID +E W + + G +G ILTK+
Sbjct: 355 ISFHSLEDRIVKQTFLELIHEDEIDDDEDDLVSADIDSEDE-PWFKQRVQGKNGTILTKR 413
Query: 239 PLTPSEEEERLNQRCRSAKLRVLQK 165
P++PS+EEE LNQRCRSAKLRV+QK
Sbjct: 414 PISPSQEEEELNQRCRSAKLRVIQK 438
>ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group]
gi|42409129|dbj|BAD10379.1| putative methyltransferase
[Oryza sativa Japonica Group]
gi|42409260|dbj|BAD10523.1| putative methyltransferase
[Oryza sativa Japonica Group]
gi|113535362|dbj|BAF07745.1| Os02g0137600 [Oryza sativa
Japonica Group] gi|125538002|gb|EAY84397.1| hypothetical
protein OsI_05773 [Oryza sativa Indica Group]
Length = 436
Score = 139 bits (350), Expect(2) = 6e-51
Identities = 73/116 (62%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
Frame = -1
Query: 735 QASLKAEDILYLWPEAEVGLILREYGEESNWNHLQNKIMNAHSYGGLHSTGELVDLVRSM 556
+A+LKAEDIL WP+ EVG ILR+YGEESNW LQ +I+ A + GGLHSTGELV L++
Sbjct: 241 KATLKAEDILNSWPDLEVGRILRDYGEESNWQSLQKRIVKARAMGGLHSTGELVKLIQRT 300
Query: 555 SPMSKGRNGWVKT----FYALRIAVNDELNKREHALSACFDCLYFGGRLAVISIIS 400
S GR GW+KT F ALRIAVNDEL E AL ACFDCL GRLAVIS S
Sbjct: 301 CTSSGGRQGWIKTATRVFQALRIAVNDELRTLEDALHACFDCLATDGRLAVISFHS 356
Score = 89.0 bits (219), Expect(2) = 6e-51
Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -2
Query: 410 LSFHSLEDRILKKLFHDLVN---VSEERSRVLQLDIDGSEE*TWV*ESINGTDGIILTKQ 240
+SFHSLEDRI+K+ F +L++ + ++ ++ DID +E W + + G +G ILTK+
Sbjct: 352 ISFHSLEDRIVKQTFLELIHEDEIDDDEDDLVSADIDSEDE-PWFKQRVQGKNGTILTKR 410
Query: 239 PLTPSEEEERLNQRCRSAKLRVLQK 165
P++PS+EEE LNQRCRSAKLRV+QK
Sbjct: 411 PISPSQEEEELNQRCRSAKLRVIQK 435
>ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [Sorghum bicolor]
gi|241931340|gb|EES04485.1| hypothetical protein
SORBIDRAFT_04g003030 [Sorghum bicolor]
Length = 445
Score = 140 bits (352), Expect(2) = 3e-50
Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
Frame = -1
Query: 735 QASLKAEDILYLWPEAEVGLILREYGEESNWNHLQNKIMNAHSYGGLHSTGELVDLVRSM 556
+A+L+AEDIL WPE E+G ILREYGEESNW +Q +I+ A + GGLHSTG+LV L++ M
Sbjct: 247 KATLRAEDILNSWPEIELGRILREYGEESNWQSVQKQIVKARATGGLHSTGDLVKLIQRM 306
Query: 555 SPMSKGRNGWVKT----FYALRIAVNDELNKREHALSACFDCLYFGGRLAVISIIS 400
+S GR GW+KT F ALRIAVNDEL E +L +CFDCL GGRLAVIS S
Sbjct: 307 CSISSGRQGWIKTATRVFQALRIAVNDELRVLEDSLHSCFDCLATGGRLAVISFHS 362
Score = 85.9 bits (211), Expect(2) = 3e-50
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Frame = -2
Query: 410 LSFHSLEDRILKKLFHDLVNVSE------ERSRVLQLDIDGSEE*TWV*ESINGTDGIIL 249
+SFHSLEDRI+KK F +L++ E ++ + DI +E W + + G +G +L
Sbjct: 358 ISFHSLEDRIVKKTFLELIHGGEADDEEDDKDDLALTDIVNEDE-PWFGQRVQGRNGTVL 416
Query: 248 TKQPLTPSEEEERLNQRCRSAKLRVLQK 165
TK+P+TPS+EEE+LNQRCRSAKLRV+QK
Sbjct: 417 TKRPITPSQEEEKLNQRCRSAKLRVIQK 444