BLASTX nr result

ID: Coptis25_contig00012411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012411
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276375.1| PREDICTED: uncharacterized protein LOC100256...   285   8e-75
ref|XP_003516915.1| PREDICTED: uncharacterized protein LOC100811...   284   1e-74
ref|XP_004162756.1| PREDICTED: uncharacterized LOC101212170 [Cuc...   275   9e-72
ref|XP_004147900.1| PREDICTED: uncharacterized protein LOC101212...   275   9e-72
ref|XP_003520943.1| PREDICTED: uncharacterized protein LOC100813...   273   2e-71

>ref|XP_002276375.1| PREDICTED: uncharacterized protein LOC100256309 [Vitis vinifera]
           gi|297740274|emb|CBI30456.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score =  285 bits (728), Expect = 8e-75
 Identities = 144/239 (60%), Positives = 172/239 (71%), Gaps = 2/239 (0%)
 Frame = -2

Query: 712 RNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARI 533
           RNWS++ARGI GRSGKSCRLRWCNQLDP V+RKPFT+EEDRIIVAAHAIHGNKWA IAR+
Sbjct: 67  RNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWASIARL 126

Query: 532 LRGRTDNAIKNHWNST-XXXXXXXXXXXGPSAKRMEHISLDKTKASSEETLSCGDVSSFR 356
           L+GRTDNAIKNHWNST              S   +E +SLDKTKASSEET+SCGD +S +
Sbjct: 127 LQGRTDNAIKNHWNSTLRRRCMEIDRAKLESGNIVEDVSLDKTKASSEETMSCGDANSSK 186

Query: 355 SSEGKDVNFVESMSVQCDDRAQ-SNYIVTVANEPPSLFHPVARVSAFNIYIPPNGTRNVS 179
           S EGKDVN  ++M+ Q ++RAQ        A +PP+LF PVARVSAFN+Y   +G  +  
Sbjct: 187 SLEGKDVNSSDNMADQNEERAQIEGQFSHEAQDPPTLFRPVARVSAFNVYSSLDGPEHAF 246

Query: 178 QLSREVPCTGPLNQVTQPDISICRLLEGVCGEPLVPSQCGHGCCGTKGERNPQSSLLGP 2
              R VP  GPL Q + PD  IC+L++G  GE LVP +CGHGCC +    N  +SLLGP
Sbjct: 247 PFPRPVPMQGPLIQASTPDAGICKLIQGDSGEQLVPQRCGHGCCESPRGGNLGNSLLGP 305


>ref|XP_003516915.1| PREDICTED: uncharacterized protein LOC100811740 [Glycine max]
          Length = 350

 Score =  284 bits (726), Expect = 1e-74
 Identities = 143/239 (59%), Positives = 174/239 (72%), Gaps = 2/239 (0%)
 Frame = -2

Query: 712 RNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARI 533
           RNWS++ARGI GRSGKSCRLRWCNQLDP V+RKPFT+EEDR+IVAAHAIHGNKWA IAR+
Sbjct: 54  RNWSLIARGISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRMIVAAHAIHGNKWAAIARL 113

Query: 532 LRGRTDNAIKNHWNST-XXXXXXXXXXXGPSAKRMEHISLDKTKASSEETLSCGDVSSFR 356
           L GRTDNAIKNHWNST              S   ME +SL+K KASSE+TLSCGDV S +
Sbjct: 114 LPGRTDNAIKNHWNSTLRRRGVGHDTIKLESVSFMEDVSLEKAKASSEDTLSCGDV-SLK 172

Query: 355 SSEGKDVNFVESMSVQCDDRAQS-NYIVTVANEPPSLFHPVARVSAFNIYIPPNGTRNVS 179
           SSEG+DV+ +E M  + DD+AQ+   I     + P+LF PVARVSAFN+Y   +GT+  +
Sbjct: 173 SSEGRDVSSMEIMDDKSDDKAQTEGQIHHEVKDLPTLFRPVARVSAFNVYHSFDGTQPST 232

Query: 178 QLSREVPCTGPLNQVTQPDISICRLLEGVCGEPLVPSQCGHGCCGTKGERNPQSSLLGP 2
            + R VP  G + Q ++PD+  CR+LEG+CG+  VP QCGHGCC     R  +SSLLGP
Sbjct: 233 SIKRPVPMQGAVLQSSKPDMEFCRMLEGICGDQSVPHQCGHGCCAAPDGRKSESSLLGP 291


>ref|XP_004162756.1| PREDICTED: uncharacterized LOC101212170 [Cucumis sativus]
          Length = 377

 Score =  275 bits (702), Expect = 9e-72
 Identities = 138/241 (57%), Positives = 167/241 (69%), Gaps = 4/241 (1%)
 Frame = -2

Query: 712 RNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARI 533
           RNWS++ARGI GRSGKSCRLRWCNQLDP V+RKPFT+EEDRIIVAAHA+HGNKWA IAR+
Sbjct: 78  RNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAVHGNKWAAIARL 137

Query: 532 LRGRTDNAIKNHWNST-XXXXXXXXXXXGPSAKRMEHISLDKTKASSEETLSCGDVSSFR 356
           L GRTDNAIKNHWNST              S   ++  SL+KTK SSEETLSCGDV+SF+
Sbjct: 138 LPGRTDNAIKNHWNSTLRRRCTELERIKLESGNVVDDASLEKTKGSSEETLSCGDVNSFK 197

Query: 355 SSEGKDVNFVESMSVQCDDRAQ---SNYIVTVANEPPSLFHPVARVSAFNIYIPPNGTRN 185
           S +GKD    E +  Q +D+             NE P+LF PVARVSAF++Y P +G  +
Sbjct: 198 SMDGKDTCSREQLDDQYEDKVPIVVEGQFTHEVNEQPTLFRPVARVSAFSVYNPLDGQGS 257

Query: 184 VSQLSREVPCTGPLNQVTQPDISICRLLEGVCGEPLVPSQCGHGCCGTKGERNPQSSLLG 5
           +    R VP  GPL QV++PD+   + LEGV G+  VP QCGHGCC +  + +P  SLLG
Sbjct: 258 LRPFLRPVPMQGPLIQVSKPDVEASKFLEGVYGDRSVPHQCGHGCCKSHNQGSPLESLLG 317

Query: 4   P 2
           P
Sbjct: 318 P 318


>ref|XP_004147900.1| PREDICTED: uncharacterized protein LOC101212170 [Cucumis sativus]
          Length = 377

 Score =  275 bits (702), Expect = 9e-72
 Identities = 138/241 (57%), Positives = 167/241 (69%), Gaps = 4/241 (1%)
 Frame = -2

Query: 712 RNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARI 533
           RNWS++ARGI GRSGKSCRLRWCNQLDP V+RKPFT+EEDRIIVAAHA+HGNKWA IAR+
Sbjct: 78  RNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAVHGNKWAAIARL 137

Query: 532 LRGRTDNAIKNHWNST-XXXXXXXXXXXGPSAKRMEHISLDKTKASSEETLSCGDVSSFR 356
           L GRTDNAIKNHWNST              S   ++  SL+KTK SSEETLSCGDV+SF+
Sbjct: 138 LPGRTDNAIKNHWNSTLRRRCTELERIKLESGNVVDDASLEKTKGSSEETLSCGDVNSFK 197

Query: 355 SSEGKDVNFVESMSVQCDDRAQ---SNYIVTVANEPPSLFHPVARVSAFNIYIPPNGTRN 185
           S +GKD    E +  Q +D+             NE P+LF PVARVSAF++Y P +G  +
Sbjct: 198 SMDGKDACSREQLDDQYEDKVPIVVEGQFTHEVNEQPTLFRPVARVSAFSVYNPLDGQGS 257

Query: 184 VSQLSREVPCTGPLNQVTQPDISICRLLEGVCGEPLVPSQCGHGCCGTKGERNPQSSLLG 5
           +    R VP  GPL QV++PD+   + LEGV G+  VP QCGHGCC +  + +P  SLLG
Sbjct: 258 LRPFLRPVPMQGPLIQVSKPDVEASKFLEGVYGDRSVPHQCGHGCCKSHNQGSPLESLLG 317

Query: 4   P 2
           P
Sbjct: 318 P 318


>ref|XP_003520943.1| PREDICTED: uncharacterized protein LOC100813406 [Glycine max]
          Length = 352

 Score =  273 bits (699), Expect = 2e-71
 Identities = 139/239 (58%), Positives = 171/239 (71%), Gaps = 2/239 (0%)
 Frame = -2

Query: 712 RNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIARI 533
           RNWS++ARGI GRSGKSCRLRWCNQLDP V+RKPFT+EED++IVAAHAIHGNKWA IAR+
Sbjct: 56  RNWSLIARGISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDQMIVAAHAIHGNKWAAIARL 115

Query: 532 LRGRTDNAIKNHWNST-XXXXXXXXXXXGPSAKRMEHISLDKTKASSEETLSCGDVSSFR 356
           L GRTDNAIKNHWNST              S   ME +SL+K KASSE+TLSCGDV S +
Sbjct: 116 LPGRTDNAIKNHWNSTLRRRGVGHDTIKLESGSFMEDVSLEKAKASSEDTLSCGDV-SLK 174

Query: 355 SSEGKDVNFVESMSVQCDDRAQS-NYIVTVANEPPSLFHPVARVSAFNIYIPPNGTRNVS 179
           SSEG+DV+ +E M  + D +AQ+   +     +PP+LF PVARVSAFN+Y   +GT+  +
Sbjct: 175 SSEGRDVSSMEIMDDKSDGKAQTEGQLHHEVKDPPTLFRPVARVSAFNVYHSFDGTQPST 234

Query: 178 QLSREVPCTGPLNQVTQPDISICRLLEGVCGEPLVPSQCGHGCCGTKGERNPQSSLLGP 2
            + R V   GP+ Q ++PD+   R LEG+ G+  VP QCGHGCC     R  +SSLLGP
Sbjct: 235 SIPRSVSMQGPVLQSSKPDMEFYRALEGIFGDQSVPHQCGHGCCAAPNGRKSESSLLGP 293


Top