BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012398
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
emb|CBI33242.3| unnamed protein product [Vitis vinifera]              154   9e-36
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   154   9e-36
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   146   1e-33
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              146   2e-33

>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/101 (73%), Positives = 82/101 (81%)
 Frame = +2

Query: 80  IHVSEWMEKKVECTFSSGERAVQLDLIGRVRGLDSAESYFNSLSDEDKIDKTYGALLNCY 259
           + +SEWM KK  C FS  E AVQLDLIGRVRG  SAESYFNSL + DK DKTYGALLNCY
Sbjct: 91  LEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCY 150

Query: 260 VRAGLTDKSVSHLQKMKENGFASTPLCYNDLMCLYTNTGEY 382
           VR   TDKS+SHLQKMKE GFAS+PL YND+MCLYTN G++
Sbjct: 151 VRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQH 191


>emb|CBI33242.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/101 (73%), Positives = 82/101 (81%)
 Frame = +2

Query: 80  IHVSEWMEKKVECTFSSGERAVQLDLIGRVRGLDSAESYFNSLSDEDKIDKTYGALLNCY 259
           + +SEWM KK  C FS  E AVQLDLIGRVRG  SAESYFNSL + DK DKTYGALLNCY
Sbjct: 91  LEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCY 150

Query: 260 VRAGLTDKSVSHLQKMKENGFASTPLCYNDLMCLYTNTGEY 382
           VR   TDKS+SHLQKMKE GFAS+PL YND+MCLYTN G++
Sbjct: 151 VRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQH 191


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/101 (73%), Positives = 82/101 (81%)
 Frame = +2

Query: 80  IHVSEWMEKKVECTFSSGERAVQLDLIGRVRGLDSAESYFNSLSDEDKIDKTYGALLNCY 259
           + +SEWM KK  C FS  E AVQLDLIGRVRG  SAESYFNSL + DK DKTYGALLNCY
Sbjct: 91  LEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCY 150

Query: 260 VRAGLTDKSVSHLQKMKENGFASTPLCYNDLMCLYTNTGEY 382
           VR   TDKS+SHLQKMKE GFAS+PL YND+MCLYTN G++
Sbjct: 151 VRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQH 191


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/101 (70%), Positives = 79/101 (78%)
 Frame = +2

Query: 80  IHVSEWMEKKVECTFSSGERAVQLDLIGRVRGLDSAESYFNSLSDEDKIDKTYGALLNCY 259
           + VSEWM KK  C FSS E AVQLDLIG+VRG  SAE+YFN+L D DK DKTYGALLNCY
Sbjct: 66  LEVSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCY 125

Query: 260 VRAGLTDKSVSHLQKMKENGFASTPLCYNDLMCLYTNTGEY 382
           VR   TD+S+SH QKMKE G AS+PL YND+MCLY N G Y
Sbjct: 126 VRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLY 166


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/121 (61%), Positives = 90/121 (74%), Gaps = 6/121 (4%)
 Frame = +2

Query: 35  RESHPYESVR*VRTR------IHVSEWMEKKVECTFSSGERAVQLDLIGRVRGLDSAESY 196
           R+   +  +R +R+R      + VSEWM  K  C FS   RAVQLDLIG+VRGL+SAE+Y
Sbjct: 68  RDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQVRGLESAENY 127

Query: 197 FNSLSDEDKIDKTYGALLNCYVRAGLTDKSVSHLQKMKENGFASTPLCYNDLMCLYTNTG 376
           FN++S E+KIDK YGALLNCYVR  + DKS+SHLQKMKE GFASTPL YN LMCLY NT 
Sbjct: 128 FNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNGLMCLYINTD 187

Query: 377 E 379
           +
Sbjct: 188 Q 188