BLASTX nr result

ID: Coptis25_contig00012390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012390
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518012.1| conserved hypothetical protein [Ricinus comm...   107   4e-21
ref|XP_002325709.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20
emb|CBI27700.3| unnamed protein product [Vitis vinifera]              105   3e-20
ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...   105   3e-20
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]   105   3e-20

>ref|XP_002518012.1| conserved hypothetical protein [Ricinus communis]
           gi|223542994|gb|EEF44530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 634

 Score =  107 bits (268), Expect = 4e-21
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = +1

Query: 109 LSLLLFETATMGYLEAERLHKYFADQGTDRHAWETNHVLFYPGGKRQLYGYMARKEDINN 288
           +SLL+FE++  GYLEAERLHK+F DQGTDR+AW+   VLFYPGGKRQLYGYMA KED+  
Sbjct: 366 MSLLVFESSPRGYLEAERLHKHFVDQGTDRNAWDRRRVLFYPGGKRQLYGYMAVKEDLEI 425

Query: 289 FNRHCQG 309
           FN+H QG
Sbjct: 426 FNQHSQG 432


>ref|XP_002325709.1| predicted protein [Populus trichocarpa] gi|222862584|gb|EEF00091.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  105 bits (262), Expect = 2e-20
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = +1

Query: 109 LSLLLFETATMGYLEAERLHKYFADQGTDRHAWETNHVLFYPGGKRQLYGYMARKEDINN 288
           +S+L+FE++  GYLEAERLHK+FA+QGTDR+AW+   VLFY GGKRQLYGYMA KED++ 
Sbjct: 30  MSILIFESSARGYLEAERLHKHFAEQGTDRNAWDRRRVLFYQGGKRQLYGYMALKEDLDL 89

Query: 289 FNRHCQG 309
           FN+H QG
Sbjct: 90  FNQHSQG 96


>emb|CBI27700.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  105 bits (261), Expect = 3e-20
 Identities = 46/67 (68%), Positives = 57/67 (85%)
 Frame = +1

Query: 109 LSLLLFETATMGYLEAERLHKYFADQGTDRHAWETNHVLFYPGGKRQLYGYMARKEDINN 288
           +S+L+FE++ +GYLEAERLHK+FA+QGTDR AW+   V FYPGGKRQLYGYMA KED+  
Sbjct: 226 MSVLIFESSAIGYLEAERLHKHFAEQGTDREAWDRRRVPFYPGGKRQLYGYMAIKEDLTL 285

Query: 289 FNRHCQG 309
           FN+H QG
Sbjct: 286 FNQHSQG 292


>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
           vinifera]
          Length = 718

 Score =  105 bits (261), Expect = 3e-20
 Identities = 46/67 (68%), Positives = 57/67 (85%)
 Frame = +1

Query: 109 LSLLLFETATMGYLEAERLHKYFADQGTDRHAWETNHVLFYPGGKRQLYGYMARKEDINN 288
           +S+L+FE++ +GYLEAERLHK+FA+QGTDR AW+   V FYPGGKRQLYGYMA KED+  
Sbjct: 450 MSVLIFESSAIGYLEAERLHKHFAEQGTDREAWDRRRVPFYPGGKRQLYGYMAIKEDLTL 509

Query: 289 FNRHCQG 309
           FN+H QG
Sbjct: 510 FNQHSQG 516


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  105 bits (261), Expect = 3e-20
 Identities = 46/67 (68%), Positives = 57/67 (85%)
 Frame = +1

Query: 109 LSLLLFETATMGYLEAERLHKYFADQGTDRHAWETNHVLFYPGGKRQLYGYMARKEDINN 288
           +S+L+FE++ +GYLEAERLHK+FA+QGTDR AW+   V FYPGGKRQLYGYMA KED+  
Sbjct: 687 MSVLIFESSAIGYLEAERLHKHFAEQGTDREAWDRRRVPFYPGGKRQLYGYMAIKEDLTL 746

Query: 289 FNRHCQG 309
           FN+H QG
Sbjct: 747 FNQHSQG 753


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