BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012384
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18334.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arab...   144   1e-32
ref|NP_200621.1| RNA recognition motif-containing protein [Arabi...   143   2e-32
gb|AAM98125.1| unknown protein [Arabidopsis thaliana]                 143   2e-32
ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] g...   137   9e-31

>emb|CBI18334.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  148 bits (373), Expect = 5e-34
 Identities = 77/126 (61%), Positives = 91/126 (72%), Gaps = 11/126 (8%)
 Frame = +2

Query: 2   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSAYNGCV 181
           VGGLGE VT  D+ K  SSLGTVK ++ ++T GRSFAY+DF PSS KSL+KLFS YNGC 
Sbjct: 188 VGGLGETVTSDDINKMLSSLGTVKVVDIMRTKGRSFAYLDFLPSSAKSLSKLFSTYNGCF 247

Query: 182 WKGGRLRLEKAKEHYLVRLRREWEEDVEVA----------QDNIDIPEK-PKLLTQDKTQ 328
           WKGGRL+LEKAKEHYLVRL REW ED E+A            NI   +K  K + Q+K+Q
Sbjct: 248 WKGGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSIDKNTNIVASDKLKKTVNQEKSQ 307

Query: 329 LKIFFP 346
           L+IFFP
Sbjct: 308 LRIFFP 313


>ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arabidopsis lyrata subsp.
           lyrata] gi|297312086|gb|EFH42510.1| hypothetical protein
           ARALYDRAFT_495917 [Arabidopsis lyrata subsp. lyrata]
          Length = 728

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/115 (62%), Positives = 80/115 (69%)
 Frame = +2

Query: 2   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSAYNGCV 181
           VGGLGE V   DL K FS +GTV ++EFV+T GRSFAYVDF PSS  SL KLFS YNGCV
Sbjct: 15  VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYVDFSPSSTNSLTKLFSTYNGCV 74

Query: 182 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIPEKPKLLTQDKTQLKIFFP 346
           WKGGRLRLEKAKEHYL RL+REWE     + + I  P      +   T L IFFP
Sbjct: 75  WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAPSD----STPSTHLNIFFP 125


>ref|NP_200621.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|9759539|dbj|BAB11005.1| unnamed protein product
           [Arabidopsis thaliana] gi|110738487|dbj|BAF01169.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332009617|gb|AED97000.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 80/115 (69%)
 Frame = +2

Query: 2   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSAYNGCV 181
           VGGLGE V   DL K FS +GTV ++EFV+T GRSFAY+DF PSS  SL KLFS YNGCV
Sbjct: 14  VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSPSSTNSLTKLFSTYNGCV 73

Query: 182 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIPEKPKLLTQDKTQLKIFFP 346
           WKGGRLRLEKAKEHYL RL+REWE     + + I  P      +   T L IFFP
Sbjct: 74  WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAPSD----SPPATHLNIFFP 124


>gb|AAM98125.1| unknown protein [Arabidopsis thaliana]
          Length = 748

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 80/115 (69%)
 Frame = +2

Query: 2   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSAYNGCV 181
           VGGLGE V   DL K FS +GTV ++EFV+T GRSFAY+DF PSS  SL KLFS YNGCV
Sbjct: 14  VGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSPSSTNSLTKLFSTYNGCV 73

Query: 182 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNIDIPEKPKLLTQDKTQLKIFFP 346
           WKGGRLRLEKAKEHYL RL+REWE     + + I  P      +   T L IFFP
Sbjct: 74  WKGGRLRLEKAKEHYLARLKREWEAASSTSDNTIKAPSD----SPPATHLNIFFP 124


>ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group]
           gi|42409268|dbj|BAD10531.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza
           sativa Japonica Group] gi|125538008|gb|EAY84403.1|
           hypothetical protein OsI_05779 [Oryza sativa Indica
           Group] gi|125580747|gb|EAZ21678.1| hypothetical protein
           OsJ_05309 [Oryza sativa Japonica Group]
           gi|215694017|dbj|BAG89216.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 552

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/123 (55%), Positives = 87/123 (70%), Gaps = 8/123 (6%)
 Frame = +2

Query: 2   VGGLGEKVTEADLQKTFSSLGTVKSIEFVKTSGRSFAYVDFQPSSDKSLNKLFSAYNGCV 181
           VGG+ E V  ADL+  F+S+G V  +EFV+T+GRSFAYVDF   SDK+L KLFS YNGC 
Sbjct: 20  VGGISEGVAAADLEAMFASVGRVAGVEFVRTNGRSFAYVDFHCPSDKALAKLFSTYNGCK 79

Query: 182 WKGGRLRLEKAKEHYLVRLRREWEEDVEVAQD---NIDIPEKPKLL-----TQDKTQLKI 337
           WKGG+LRLEKAKEHYL RL+REWE++   AQ+   + D+  K + L       D T++ I
Sbjct: 80  WKGGKLRLEKAKEHYLTRLKREWEQEAAAAQEMPASADVESKKEKLELNKAVLDSTKINI 139

Query: 338 FFP 346
           +FP
Sbjct: 140 YFP 142