BLASTX nr result

ID: Coptis25_contig00012383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012383
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homol...    82   4e-14
emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera]    81   8e-14
ref|XP_003555267.1| PREDICTED: uncharacterized protein LOC100800...    79   4e-13
ref|XP_002312423.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002532234.1| conserved hypothetical protein [Ricinus comm...    75   5e-12

>ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homolog [Vitis vinifera]
           gi|297737743|emb|CBI26944.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/60 (63%), Positives = 46/60 (76%)
 Frame = +3

Query: 15  IPPLAGTVWEACESLKKTSTTNYTAIGRGITQAAVSVKDVVCELKELKPGNNDPVDDALD 194
           IP L G VWEAC +LKKT  TN TAIGR +TQ AVS+KDV+ E+KELKP ++DP D+  D
Sbjct: 137 IPQLVGAVWEACSALKKTPATNITAIGRTMTQVAVSMKDVLREMKELKPASSDPTDETSD 196


>emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera]
          Length = 355

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +3

Query: 15  IPPLAGTVWEACESLKKTSTTNYTAIGRGITQAAVSVKDVVCELKELKPGNNDPVDDALD 194
           IP L G VWEAC  LKKT  TN TAIGR +TQ AVS+KDV+ E+KELKP ++DP D+  D
Sbjct: 128 IPQLVGAVWEACSXLKKTPATNITAIGRTMTQVAVSMKDVLREMKELKPASSDPTDETSD 187


>ref|XP_003555267.1| PREDICTED: uncharacterized protein LOC100800265 [Glycine max]
          Length = 399

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/59 (66%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
 Frame = +3

Query: 15  IPPLAGTVWEACESLKKTSTTNYTAIGRGITQAAVSVKDVVCELKELKPGN-NDPVDDA 188
           +P L G VWEAC +LKKT +TN TAIGRG+TQ AVSVKDV+ E+KELKP + +D VD+A
Sbjct: 172 VPQLVGAVWEACSALKKTPSTNITAIGRGMTQVAVSVKDVLREMKELKPVSCDDQVDEA 230


>ref|XP_002312423.1| predicted protein [Populus trichocarpa] gi|222852243|gb|EEE89790.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/58 (60%), Positives = 45/58 (77%)
 Frame = +3

Query: 15  IPPLAGTVWEACESLKKTSTTNYTAIGRGITQAAVSVKDVVCELKELKPGNNDPVDDA 188
           +P L G VWEAC++LKKT  +N TAIGR +TQ AVSVKDV+ E+KELKPG ++  + A
Sbjct: 137 VPQLVGAVWEACDALKKTPASNITAIGRAMTQVAVSVKDVLREMKELKPGPSNQTEAA 194


>ref|XP_002532234.1| conserved hypothetical protein [Ricinus communis]
           gi|223528091|gb|EEF30165.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +3

Query: 15  IPPLAGTVWEACESLKKTSTTNYTAIGRGITQAAVSVKDVVCELKELKPGNNDPVDDA 188
           +P L G VWEAC +LKKT  TN TAIGR +TQ AV VKDV+ E+KELKP  ++  D+A
Sbjct: 137 VPQLTGVVWEACSALKKTPATNITAIGRAMTQVAVLVKDVIREMKELKPATSNLKDEA 194


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