BLASTX nr result
ID: Coptis25_contig00012365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012365
(1834 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532127.1| leucine-rich repeat containing protein, puta... 385 e-138
ref|XP_002516740.1| leucine-rich repeat containing protein, puta... 359 e-132
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera] 360 e-131
ref|XP_002271203.1| PREDICTED: putative disease resistance prote... 360 e-131
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta... 338 e-125
>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223528186|gb|EEF30247.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1142
Score = 385 bits (989), Expect(2) = e-138
Identities = 195/347 (56%), Positives = 252/347 (72%), Gaps = 10/347 (2%)
Frame = +2
Query: 5 SILTEPKVYGRDEEKESVIRLLLNNVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDRVKE 184
SI T+ +VYGRD++KE VI L++ ++ +DVS P KTTLAQLVYN++RVK
Sbjct: 135 SIATQSQVYGRDQDKEKVIDSLVDQISDADDVSVYPIIGMGGLGKTTLAQLVYNDERVKR 194
Query: 185 HFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCRLQEQLVGKRYLLVLDDV 364
HF++RIWVCVS +F ++RL K +I S SGNAC +LDPLQ +LQE L GKRYL+VLD V
Sbjct: 195 HFDLRIWVCVSGEFDVRRLVKTIIESASGNACPCLDLDPLQRQLQEILSGKRYLIVLDHV 254
Query: 365 WNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPYCLKFLSEDDCWSLFKQR 544
WN +Q+ W+R + L CG+KGSS+IVTTR+E VAS+ GT P + L LSE DCW LFK+R
Sbjct: 255 WNGDQDKWDRLKFVLACGSKGSSIIVTTRMEKVASVMGTLPAHNLSGLSEADCWLLFKER 314
Query: 545 AFGMGNQG------IGKEIVKKCGAVPLAAKALGGLMRFKGEENDWLSVRDNGLWDLTQS 706
AF + IG EIVKKCG VPLAAKALG LMR+K EN+WLSV+++ +WDL Q
Sbjct: 315 AFECRREEHPSIICIGHEIVKKCGGVPLAAKALGSLMRYKNGENEWLSVKESEIWDLPQD 374
Query: 707 KENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVILLWMANGFVHSKEGRQLE 886
E +I+PALRLSY++LP+ LR+CF +C+IFPKD +I K+++ILLWMANGF+ S + E
Sbjct: 375 -ECSIMPALRLSYSNLPLKLRKCFVYCAIFPKDCVIHKEDIILLWMANGFISSTRREEPE 433
Query: 887 DIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSIMINE 1015
D+G+EI L WRS FQDV KD+ +I KM HDLA S+M +E
Sbjct: 434 DVGNEICSELCWRSLFQDVEKDKLGSIKRFKMHDLIHDLAHSVMEDE 480
Score = 134 bits (336), Expect(2) = e-138
Identities = 88/238 (36%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Frame = +1
Query: 1135 SLRTLILLDHTNNGRSLEFDFC---TRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFS 1305
SLRTL+L + +F +R +LR + L+ + SI L+HLRYL+ S
Sbjct: 520 SLRTLLLQPILLTAGKPKVEFSCDLSRLTTLRVFGIRRTNLMMLSSSIRHLKHLRYLDLS 579
Query: 1306 RTDITSLPKSICKLRNXXXXXXXXXXXXXXXPKCFGKLRSLSHLDIRECYSLTQLPAGIG 1485
T I LP+S+ L N PK KL++L HL + C+SLT +P IG
Sbjct: 580 STLIWRLPESVSSLLNLQTLKLVNCVALQRLPKHIWKLKNLRHLYLNGCFSLTYMPPKIG 639
Query: 1486 RLTLLQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLG 1665
++T L+TLN+FIV GCHI E + L+ L G+L I LE V +AKAANL K L
Sbjct: 640 QITCLKTLNLFIVRKGSGCHISELEALD-LGGKLHIRHLERVGTPFEAKAANLNRKHKLQ 698
Query: 1666 SLNLTW--STSQLQEEVYMEVIEGLRPQPNMRMLSTGRYQGLTFPSWLEVSSLPKLVA 1833
L L+W T Q++ V+E L P N+ L Y+G FP W+ L +V+
Sbjct: 699 DLRLSWEGETEFEQQDNVRNVLEALEPHSNLEYLEIEGYRGNYFPYWMRDQILQNVVS 756
>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223544113|gb|EEF45638.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1104
Score = 359 bits (921), Expect(2) = e-132
Identities = 184/362 (50%), Positives = 250/362 (69%), Gaps = 11/362 (3%)
Frame = +2
Query: 2 SSILTEPKVYGRDEEKESVIRLLLNNVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDRVK 181
+S++ E ++ GRD+EKE +I +LL S ED+S KTTLAQLVYN+ VK
Sbjct: 158 TSLVNESEIIGRDKEKEELINMLLT---SSEDLSVYAICGMGGLGKTTLAQLVYNDTTVK 214
Query: 182 EHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCRLQEQLVGKRYLLVLDD 361
F++RIWVCVS+DF ++RLT+A++ SI G + +E+DPLQ +LQE+L GK++LL+LDD
Sbjct: 215 RLFDMRIWVCVSDDFDLRRLTRAILESIEGCPPNCQEMDPLQRQLQERLSGKKFLLMLDD 274
Query: 362 VWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPYCLKFLSEDDCWSLFKQ 541
VWNE+ + W+ ++CGA GS V VTTR E +A + T+P Y + LS+DD WSLF+Q
Sbjct: 275 VWNESSDKWDGIKNMIRCGATGSVVTVTTRNENIALMMATTPTYYIGRLSDDDSWSLFEQ 334
Query: 542 RAFGMGN-------QGIGKEIVKKCGAVPLAAKALGGLMRFKGEENDWLSVRDNGLWDLT 700
RAFG+ + IG+ IV KCG VPLA KA+G LMR K ++++WLSV+++ +W+L+
Sbjct: 335 RAFGLERKEEFLHLETIGRAIVNKCGGVPLAIKAMGSLMRLKRKKSEWLSVKESEMWELS 394
Query: 701 QSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVILLWMANGFVHSKEGRQ 880
+ N+LPALRLSYNHL +L+QCFAFCSIFPKD I+K+++I LWMANGF+ +
Sbjct: 395 NERNMNVLPALRLSYNHLAPHLKQCFAFCSIFPKDFHIKKEKLIELWMANGFIPCQGKMD 454
Query: 881 LEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSIMINECRNIELGKFKS 1048
L D G EIF L+WRSF QDV +D N CKM HDLA S+MI+EC+ IE K
Sbjct: 455 LHDKGHEIFYELVWRSFLQDVEEDRLGNTT-CKMHDLIHDLAQSMMIDECKLIEPNKVLH 513
Query: 1049 TP 1054
P
Sbjct: 514 VP 515
Score = 141 bits (355), Expect(2) = e-132
Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 5/237 (2%)
Frame = +1
Query: 1135 SLRTLILLDHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFSRTD 1314
SLR+ + +D+ + + + LR + L + L +P SI L+HLRYL+FS +
Sbjct: 542 SLRSFLWIDYGYRDDQVS-SYLFKQKHLRVLDLLNYHLQKLPMSIDRLKHLRYLDFSYSS 600
Query: 1315 ITSLPKSICKLRNXXXXXXXXXXXXXXXPKCFGKLRSLSHLDIRECYSLTQLPAGIGRLT 1494
I +LP+S L+ PK +++L +LDI C SL+ +PA +G+LT
Sbjct: 601 IRTLPESTISLQILEILNLKHCYNLCKLPKGLKHIKNLVYLDITNCDSLSYMPAEMGKLT 660
Query: 1495 LLQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLGSLN 1674
L+ L++FIV ++GC ++E +ELN L G+L+I L+ VK+ DAK ANL+ K L SL+
Sbjct: 661 CLRKLSLFIVGKDNGCRMEELKELN-LGGDLSIKKLDYVKSCEDAKNANLMQKEDLKSLS 719
Query: 1675 LTWS-----TSQLQEEVYMEVIEGLRPQPNMRMLSTGRYQGLTFPSWLEVSSLPKLV 1830
L WS +S L E EV++G +P N++ LS +YQG F SW+ SLP LV
Sbjct: 720 LCWSREGEDSSNLSE----EVLDGCQPHSNLKKLSIRKYQGSKFASWMTDLSLPNLV 772
>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
Length = 1697
Score = 360 bits (925), Expect(2) = e-131
Identities = 183/362 (50%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Frame = +2
Query: 5 SILTEPKVYGRDEEKESVIRLLLNNVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDRVKE 184
S L E V GRD ++E +I+LL +N S DVS P KTTLA+L YN+ R +
Sbjct: 165 SFLLESDVCGRDRDREEIIKLLTDN--SHGDVSVIPIVGIGGLGKTTLAKLAYNDKRADK 222
Query: 185 HFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCRLQEQLVGKRYLLVLDDV 364
HF+ RIWVCVSEDF +KR+ +A++ S +GN C L+E++ +Q R++E ++GKR+LLVLDDV
Sbjct: 223 HFQQRIWVCVSEDFDVKRIMRAILESATGNTCHLQEMEVIQQRIRELVMGKRFLLVLDDV 282
Query: 365 WNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPYCLKFLSEDDCWSLFKQR 544
W+++ + W R S++ G++GS ++VTTR E VA I GT PY LK L EDDCWSLF+QR
Sbjct: 283 WSDDHDKWERLKNSVRHGSEGSKILVTTRSEKVALIMGTISPYYLKGLPEDDCWSLFEQR 342
Query: 545 AFGMGNQ------GIGKEIVKKCGAVPLAAKALGGLMRFKGEENDWLSVRDNGLWDLTQS 706
AF +G IG +IVKKC VPLAAK LG LM FK E+++W+ V+D+ +W+L
Sbjct: 343 AFKLGVPKEASIVAIGNDIVKKCRGVPLAAKTLGSLMCFKREKSEWVDVKDSEIWNLL-G 401
Query: 707 KENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVILLWMANGFVHSKEGRQLE 886
EN IL LRLSY+ LP +L+QCFA+CSIFPKD+ I K+ ++ LWMA GF+ S + E
Sbjct: 402 GENGILQVLRLSYDDLPSHLKQCFAYCSIFPKDYCIEKENLVQLWMAEGFLPSSGRKAPE 461
Query: 887 DIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSIMINECRNIELGKFKSTP 1054
++G+E F LLWRSFF++V KD D NIV C M HDLA S+ ++C +E+G+ S P
Sbjct: 462 EVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGSDCSAVEVGRQVSIP 521
Query: 1055 DA 1060
A
Sbjct: 522 AA 523
Score = 137 bits (345), Expect(2) = e-131
Identities = 95/233 (40%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Frame = +1
Query: 1138 LRTLILLDHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFSRTDI 1317
+R+ +LL + +F + F SLRA+ + + SIG L+HLRYLN S I
Sbjct: 548 VRSFLLLVGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARI 607
Query: 1318 TSLPKSICKLRNXXXXXXXXXXXXXXXPKCFGKLRSLSHLDIRECYSLTQLPAGIGRLTL 1497
LP SIC L PK KL L HL+I C SL +LP GIG+L+
Sbjct: 608 KKLPSSICGLLYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSS 667
Query: 1498 LQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLGSLNL 1677
LQTL IFIV I E Q L+ L GEL I LE V N A+AANL K L SL L
Sbjct: 668 LQTLPIFIVGRGTASSIAELQGLD-LHGELMIKNLENVXNKRCARAANLKEKRNLRSLKL 726
Query: 1678 TW---STSQLQEEVYMEVIEGLRPQPNMRMLSTGRYQGLTFPSWLEVSSLPKL 1827
W + ++E V + VIEGL+P +++ L Y G FP WL SSL L
Sbjct: 727 LWEHVDEANVREHVEL-VIEGLQPSSDLKKLHVENYMGANFPCWLMNSSLSNL 778
>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
vinifera]
Length = 1179
Score = 360 bits (925), Expect(2) = e-131
Identities = 183/362 (50%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Frame = +2
Query: 5 SILTEPKVYGRDEEKESVIRLLLNNVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDRVKE 184
S L E V GRD ++E +I+LL +N S DVS P KTTLA+L YN+ R +
Sbjct: 165 SFLLESDVCGRDRDREEIIKLLTDN--SHGDVSVIPIVGIGGLGKTTLAKLAYNDKRADK 222
Query: 185 HFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCRLQEQLVGKRYLLVLDDV 364
HF+ RIWVCVSEDF +KR+ +A++ S +GN C L+E++ +Q R++E ++GKR+LLVLDDV
Sbjct: 223 HFQQRIWVCVSEDFDVKRIMRAILESATGNTCHLQEMEVIQQRIRELVMGKRFLLVLDDV 282
Query: 365 WNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPYCLKFLSEDDCWSLFKQR 544
W+++ + W R S++ G++GS ++VTTR E VA I GT PY LK L EDDCWSLF+QR
Sbjct: 283 WSDDHDKWERLKNSVRHGSEGSKILVTTRSEKVALIMGTISPYYLKGLPEDDCWSLFEQR 342
Query: 545 AFGMGNQ------GIGKEIVKKCGAVPLAAKALGGLMRFKGEENDWLSVRDNGLWDLTQS 706
AF +G IG +IVKKC VPLAAK LG LM FK E+++W+ V+D+ +W+L
Sbjct: 343 AFKLGVPKEASIVAIGNDIVKKCRGVPLAAKTLGSLMCFKREKSEWVDVKDSEIWNLL-G 401
Query: 707 KENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVILLWMANGFVHSKEGRQLE 886
EN IL LRLSY+ LP +L+QCFA+CSIFPKD+ I K+ ++ LWMA GF+ S + E
Sbjct: 402 GENGILQVLRLSYDDLPSHLKQCFAYCSIFPKDYCIEKENLVQLWMAEGFLPSSGRKAPE 461
Query: 887 DIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSIMINECRNIELGKFKSTP 1054
++G+E F LLWRSFF++V KD D NIV C M HDLA S+ ++C +E+G+ S P
Sbjct: 462 EVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGSDCSAVEVGRQVSIP 521
Query: 1055 DA 1060
A
Sbjct: 522 AA 523
Score = 137 bits (345), Expect(2) = e-131
Identities = 95/233 (40%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Frame = +1
Query: 1138 LRTLILLDHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFSRTDI 1317
+R+ +LL + +F + F SLRA+ + + SIG L+HLRYLN S I
Sbjct: 548 VRSFLLLVGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARI 607
Query: 1318 TSLPKSICKLRNXXXXXXXXXXXXXXXPKCFGKLRSLSHLDIRECYSLTQLPAGIGRLTL 1497
LP SIC L PK KL L HL+I C SL +LP GIG+L+
Sbjct: 608 KKLPSSICGLLYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSS 667
Query: 1498 LQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLGSLNL 1677
LQTL IFIV I E Q L+ L GEL I LE V N A+AANL K L SL L
Sbjct: 668 LQTLPIFIVGRGTASSIAELQGLD-LHGELMIKNLENVMNKRCARAANLKEKRNLRSLKL 726
Query: 1678 TW---STSQLQEEVYMEVIEGLRPQPNMRMLSTGRYQGLTFPSWLEVSSLPKL 1827
W + ++E V + VIEGL+P +++ L Y G FP WL SSL L
Sbjct: 727 LWEHVDEANVREHVEL-VIEGLQPSSDLKKLHVENYMGANFPCWLMNSSLSNL 778
>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
gi|223548089|gb|EEF49581.1| leucine-rich
repeat-containing protein, putative [Ricinus communis]
Length = 1096
Score = 338 bits (866), Expect(2) = e-125
Identities = 175/361 (48%), Positives = 237/361 (65%), Gaps = 9/361 (2%)
Frame = +2
Query: 2 SSILTEPKVYGRDEEKESVIRLLLNNVNSEED--VSTCPXXXXXXXXKTTLAQLVYNEDR 175
SS++ E +V+GR ++++ ++ LL+++ NS D V P KTTLAQLVYN+
Sbjct: 155 SSLIDESRVFGRTDDQKKLVELLVSDENSGNDAGVGVVPIIGMGGLGKTTLAQLVYNDPL 214
Query: 176 VKEHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCRLQEQLVGKRYLLVL 355
V E FE++ W+CVS++F + R+TK+++ SI C+L LD LQ L+++L GK++L+VL
Sbjct: 215 VAEKFELKTWICVSDEFNVLRVTKSILESIERGPCNLVSLDILQTNLRDKLRGKKFLVVL 274
Query: 356 DDVWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPYCLKFLSEDDCWSLF 535
DDVWNE Q DW + G GS +IVTTR E VASI GT P+ L FLS+DDCW LF
Sbjct: 275 DDVWNEKQRDWEVLRLPFRVGTMGSKIIVTTRNEKVASIMGTFRPHHLDFLSDDDCWLLF 334
Query: 536 KQRAFGMGNQ-------GIGKEIVKKCGAVPLAAKALGGLMRFKGEENDWLSVRDNGLWD 694
KQRAF G++ IGKEIVKKC +PLAAK LGGL+ K E ++W + + LW+
Sbjct: 335 KQRAFVDGDETAHPNLVPIGKEIVKKCRGLPLAAKTLGGLLHAKTEVSEWGMILQSHLWE 394
Query: 695 LTQSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVILLWMANGFVHSKEG 874
L + K N ILPALRLSYN LP +L+QCF FCSIFPKDH K++++LLWMA GFVH K
Sbjct: 395 LEEEK-NEILPALRLSYNQLPAHLKQCFVFCSIFPKDHEFDKEDLVLLWMAEGFVHPKGR 453
Query: 875 RQLEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCKMHDLACSIMINECRNIELGKFKSTP 1054
R+LED+ S+ F LL RSFFQ + ++ +HDLA S+ C +E K + P
Sbjct: 454 RRLEDVASDYFDDLLLRSFFQQSKTNLSNFVMHDLIHDLAESVAGEICFRLEGEKLQDIP 513
Query: 1055 D 1057
+
Sbjct: 514 E 514
Score = 140 bits (353), Expect(2) = e-125
Identities = 86/236 (36%), Positives = 120/236 (50%), Gaps = 6/236 (2%)
Frame = +1
Query: 1138 LRTLILL-----DHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNF 1302
LRT++LL +N + L D + LR++ + + +P S+GDL H+RYLN
Sbjct: 540 LRTMLLLCSETSREVSNVKVLH-DLISSLKCLRSLDMSHIAIKDLPGSVGDLMHMRYLNL 598
Query: 1303 SRTDITSLPKSICKLRNXXXXXXXXXXXXXXXPKCFGKLRSLSHLDIRECYSLTQLPAGI 1482
S T+I LP SIC L N PKC L +L HL++ C+ L +P
Sbjct: 599 SYTEIKELPDSICNLCNLQTLILVGCNKFLTLPKCTKDLVNLRHLNLTGCWHLKSMPPSF 658
Query: 1483 GRLTLLQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYL 1662
G+LT LQ L+ F+V C + E + +N+LR L I +E V N DAK +L K Y+
Sbjct: 659 GKLTSLQRLHRFVVGKGVECGLNELKNMNELRDTLCIDRVEDVLNIEDAKEVSLKSKQYI 718
Query: 1663 GSLNLTWSTSQL-QEEVYMEVIEGLRPQPNMRMLSTGRYQGLTFPSWLEVSSLPKL 1827
L L WS SQ Q+ + E++E L P N+R L Y G FP W+ S L L
Sbjct: 719 HKLVLRWSRSQYSQDAIDEELLEYLEPHTNLRELMVDVYPGTRFPKWMGNSLLSHL 774