BLASTX nr result

ID: Coptis25_contig00012362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012362
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   355   9e-96
ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai...   348   1e-93
ref|XP_003618034.1| Transmembrane emp24 domain-containing protei...   348   1e-93
ref|XP_003618033.1| Transmembrane emp24 domain-containing protei...   348   1e-93
gb|AFK47679.1| unknown [Lotus japonicus]                              345   1e-92

>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  355 bits (911), Expect = 9e-96
 Identities = 166/202 (82%), Positives = 184/202 (91%)
 Frame = +1

Query: 124 LVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVDLI 303
           +VV+  L  LQ V GIRFV+DRE+CFSH V+ EGDTVHVSFVVIKADA WHY+EDGVDL+
Sbjct: 13  IVVMLLLSDLQGVVGIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLV 72

Query: 304 VKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQHA 483
           +KGPSGDQIHD RDKTSEKFEFV  +KGLH+FCFTNKSPY ETIDFDVHVGHFTY+DQHA
Sbjct: 73  IKGPSGDQIHDFRDKTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHA 132

Query: 484 QDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATLIG 663
           +DEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VNEGMS+RA+HKAMFES  L+G
Sbjct: 133 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVG 192

Query: 664 ASFLQVYLLKRLFERKLGTSRV 729
           AS LQ+YLL+RLFERKLG SRV
Sbjct: 193 ASVLQIYLLQRLFERKLGISRV 214


>ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta2-like [Cucumis sativus]
          Length = 214

 Score =  348 bits (893), Expect = 1e-93
 Identities = 163/214 (76%), Positives = 188/214 (87%), Gaps = 2/214 (0%)
 Frame = +1

Query: 94  MEIRSYKYVILVVLA--YLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADA 267
           ME  + ++V+++      L SL+   GIRFVIDREECFSH V+ EGDTVHVSFVVIKAD+
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 268 PWHYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDV 447
           PWHY +DGVDL++KGPSG+ +HD RDKTSEK EF+ H KGLH+FCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 448 HVGHFTYFDQHAQDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAI 627
           HVGHF+Y +QHA+DEHFNPL++QI+KLEEALYNIQFEQHWLEAQTDRQ +VNEGM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 628 HKAMFESATLIGASFLQVYLLKRLFERKLGTSRV 729
           HKAMFESA L+GAS LQVYLL+RLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214


>ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519369|gb|AET00993.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 213

 Score =  348 bits (892), Expect = 1e-93
 Identities = 159/204 (77%), Positives = 187/204 (91%)
 Frame = +1

Query: 118 VILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVD 297
           +++V++  L + +   GIRFVIDR+ECFSH V+ EGDTVHVSFVVIKAD+PWHY ++GVD
Sbjct: 10  MVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVD 69

Query: 298 LIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQ 477
           L+VKGP+G+QI D RDKTS+KFEFV H+ G+H+FCFTNKSPYHETIDFDVHVGHF+YF+Q
Sbjct: 70  LVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQ 129

Query: 478 HAQDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATL 657
           HA+DEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+GMS+RA+HKA+FESA L
Sbjct: 130 HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAAL 189

Query: 658 IGASFLQVYLLKRLFERKLGTSRV 729
           IGAS LQVYLL+RLFERKLGTSRV
Sbjct: 190 IGASALQVYLLRRLFERKLGTSRV 213


>ref|XP_003618033.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519368|gb|AET00992.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
           gi|388521389|gb|AFK48756.1| unknown [Medicago
           truncatula]
          Length = 214

 Score =  348 bits (892), Expect = 1e-93
 Identities = 159/204 (77%), Positives = 187/204 (91%)
 Frame = +1

Query: 118 VILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVD 297
           +++V++  L + +   GIRFVIDR+ECFSH V+ EGDTVHVSFVVIKAD+PWHY ++GVD
Sbjct: 11  MVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVD 70

Query: 298 LIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQ 477
           L+VKGP+G+QI D RDKTS+KFEFV H+ G+H+FCFTNKSPYHETIDFDVHVGHF+YF+Q
Sbjct: 71  LVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQ 130

Query: 478 HAQDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATL 657
           HA+DEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+GMS+RA+HKA+FESA L
Sbjct: 131 HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAAL 190

Query: 658 IGASFLQVYLLKRLFERKLGTSRV 729
           IGAS LQVYLL+RLFERKLGTSRV
Sbjct: 191 IGASALQVYLLRRLFERKLGTSRV 214


>gb|AFK47679.1| unknown [Lotus japonicus]
          Length = 212

 Score =  345 bits (884), Expect = 1e-92
 Identities = 157/204 (76%), Positives = 186/204 (91%)
 Frame = +1

Query: 118 VILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVD 297
           ++  ++   ++L++  GIRFVIDR+ECFSH V+ EGDTVH+SFVVIKAD+PWHY ++GVD
Sbjct: 9   LLFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGVD 68

Query: 298 LIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQ 477
           L+VKGP+G+QIHD RDKTSEKFEFV H+ G+H+FCFTNKSPYHETIDFDVHVGHF+Y++Q
Sbjct: 69  LVVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYEQ 128

Query: 478 HAQDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATL 657
           HA+DEHF PLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+ MS+RAIHKA+FESA L
Sbjct: 129 HAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFESAAL 188

Query: 658 IGASFLQVYLLKRLFERKLGTSRV 729
           IGAS LQVYLL+RLFERKLGTSRV
Sbjct: 189 IGASALQVYLLQRLFERKLGTSRV 212


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