BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012357
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein...   132   8e-29
ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   130   5e-28
ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Bra...   126   6e-27
ref|XP_002305656.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|2...   124   3e-26

>ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein At5g54820-like
           [Brachypodium distachyon]
          Length = 522

 Score =  132 bits (333), Expect = 8e-29
 Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 12/283 (4%)
 Frame = +3

Query: 18  DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDF-GKEFAKAQTQ 194
           DR+S LPD +L SIL+ LP K A+R+S LS+RW  LW +    +  LDF   +F +  ++
Sbjct: 11  DRLSGLPDDVLHSILARLPFKHAVRTSALSRRWPRLWLHALAASPVLDFTDPDFVRGHSR 70

Query: 195 EQFVNTVNQYLQLHSGNKIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDL-IFCQAT 371
            QFV TVN+ L       +    + F P   ++ +V  WI  A+  G  E+D+ +  Q  
Sbjct: 71  AQFVATVNRCLSARGAAPLRALRVAFSPFGAFERDVVGWISAALGSGATEVDVDLRAQGR 130

Query: 372 EKYTLVEI-------GEY-KVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQ 521
            +   +E        G + + E++L   LF    SL  L  S   L ++P    G + L 
Sbjct: 131 RRSGGIEADAEDDGGGTFRRTEVELRGDLFCSPSSLSRLSLSRFSLRHVPPGAAGLAGLT 190

Query: 522 TLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVIVTDAYAV 701
           +L LS V +TDD L   VS CP+L  L LR C+ L ++++AG   +L+ L V+      +
Sbjct: 191 SLSLSHVDVTDDALRDAVSGCPVLEFLSLRSCDLLSNVRIAGG--RLRGLEVVRCQVRQL 248

Query: 702 DIFAPNLKSVHFHGDILYGYDFRNVSALEDVFISAAGYEHTEP 830
            + AP L+S  FHGD++Y    R   +    FI + G   T P
Sbjct: 249 QVAAPALESFAFHGDLMY---LREDDSKPLEFIGSKGNNVTPP 288


>ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like
           [Brachypodium distachyon]
          Length = 520

 Score =  130 bits (326), Expect = 5e-28
 Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 9/266 (3%)
 Frame = +3

Query: 18  DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDF-GKEFAKAQTQ 194
           DR+S LPD +L SI+  +P K A+R++ LS+RW  LW +    +  LDF  + F ++Q++
Sbjct: 11  DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70

Query: 195 EQFVNTVNQYLQLHSGN-KIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDLIFCQAT 371
              V TVN+ L++  G   I+   +   P   ++ +V  WI  A+ RG  E+D+   Q  
Sbjct: 71  AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGAREVDVNLTQGR 130

Query: 372 EKYTLVEIG----EYKVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQTLCL 533
                VE+G      + E++L   LF    SL  L      L N+P    G + L +L L
Sbjct: 131 -----VELGAAFVNCRTELELPGDLFCAESSLARLSLGRCSLSNVPPGAPGLAGLTSLSL 185

Query: 534 SQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVI-VTDAYAVDIF 710
           + V ITDD +   V+ C LL  L LR C+ L  +++AG N  L+ L V+   D   + + 
Sbjct: 186 THVDITDDAVRDTVACCRLLEFLSLRNCHLLKFVRIAGEN--LRGLEVVGCLDVRQLQVA 243

Query: 711 APNLKSVHFHGDILYGYDFRNVSALE 788
           AP L+S  FHGDILY + +R   +LE
Sbjct: 244 APALESFAFHGDILY-FKYREDESLE 268


>ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Brachypodium distachyon]
          Length = 496

 Score =  126 bits (317), Expect = 6e-27
 Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 30/305 (9%)
 Frame = +3

Query: 18  DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDF-GKEFAKAQTQ 194
           DR+S LPD +L SI+  +P K A+R++ LS+RW  LW +    +  LDF  + F ++Q++
Sbjct: 11  DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70

Query: 195 EQFVNTVNQYLQLHSGN-KIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDLIFCQAT 371
              V TVN+ L++  G   I+   +   P   ++ +V  WI  A+ RG  E+D+   Q  
Sbjct: 71  AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGAREVDVNLTQGR 130

Query: 372 EKYTLVEIG----EYKVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQTLCL 533
                VE+G      + E++L   LF    SL  L      L N+P    G + L +L L
Sbjct: 131 -----VELGAAFVNCRTELELPGDLFCAESSLARLSLGRCSLSNVPPGAPGLAGLTSLSL 185

Query: 534 SQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVI-VTDAYAVDIF 710
           + V ITDD +   V+ C LL  L LR C+ L  +++AG   +L+ L V+   D   + + 
Sbjct: 186 THVDITDDAVRDTVACCRLLEFLSLRNCHVLKFVRIAGE--KLRGLEVVGCLDVRQLQVA 243

Query: 711 APNLKSVHFHGDILY-----GYDFRNVS---------------ALEDVFISAAGY-EHTE 827
           AP L+S  FHGDIL      G++F  V                 L D ++S  G+  + +
Sbjct: 244 APALESFAFHGDILCFGEDDGFEFEPVEFIGKGNTRTPSEATPELRDAYLSHIGFGVYDD 303

Query: 828 PEHDF 842
           P H+F
Sbjct: 304 PLHEF 308


>ref|XP_002305656.1| predicted protein [Populus trichocarpa] gi|222848620|gb|EEE86167.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  124 bits (312), Expect = 2e-26
 Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 3/260 (1%)
 Frame = +3

Query: 33  LPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDFGKEFAKAQTQEQFVNT 212
           LPD +L+ IL+ LP+K A++  +LS R+     + WI +  L F  +FA+ ++ E F + 
Sbjct: 37  LPDDVLDKILAFLPIKKAMQIGILSSRFN----HSWIFSRRLHFDNDFARGRSPENFKSM 92

Query: 213 VNQYLQLHSGNKIEKFLLHF-YPGEHYKANVEKWIEFAILRGVEELDLIFCQATEKYTLV 389
           VN+    H+G+ I  F L F   GE +   VEKWI+ AI +GVEEL+L F      Y + 
Sbjct: 93  VNKVFDQHAGSSILSFRLSFDADGEGFL--VEKWIKKAIEKGVEELELYF------YVIG 144

Query: 390 EIGEYKVEIDLLAILFGYDSLVHLRTSHIELNLPIDFTGFSSLQTLCLSQVSITDDTLES 569
              E    + L++ ++  +S+  L+ S  +L+LP +F G   L TL L ++ +T   +++
Sbjct: 145 INFEGGGPVKLISDVYDVESIKILKLSFCQLDLPPEFKGLHFLSTLVLRKIIVTPTLIDN 204

Query: 570 IVSKCPLLTNLYLRYCNNLGSIKVAGPNL-QLKTLSV-IVTDAYAVDIFAPNLKSVHFHG 743
           +   C LL  L +  C  +  +K++  NL + K L V    +   +DI AP L ++H+ G
Sbjct: 205 LFLNCLLLETLDIAQCYRIFHLKISTQNLKKFKELKVGDCPEILMIDIDAPTLHAIHYCG 264

Query: 744 DILYGYDFRNVSALEDVFIS 803
            + +   F N+  ++DV ++
Sbjct: 265 HVCF-IKFTNIPEVKDVMLN 283


>ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|222859724|gb|EEE97271.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  124 bits (311), Expect = 3e-26
 Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 4/262 (1%)
 Frame = +3

Query: 30  ELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDFGKEFAKAQTQEQFVN 209
           +LPD +L+ I S LP+K A++  +LS R++N W +       LDF  +FA+ ++ E F +
Sbjct: 46  DLPDDVLDMIFSFLPIKKAMQIGILSTRFKNSWNF----NRRLDFDNDFARGRSPEDFKS 101

Query: 210 TVNQYLQLHSGNKIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDLIFCQATEKYTLV 389
            VN+    H+G++I  F L F P    +  VEKWI  +I +GVEELDL F Q+   +   
Sbjct: 102 IVNKVFDRHAGSRILSFRLCFDPNRE-ELLVEKWIRKSIEKGVEELDLEFYQSGNVF--- 157

Query: 390 EIGEYKVEIDLLAILFGYDSLVHLRTSHIELNLPIDFTGFSSLQTLCLSQVSITDDTLES 569
              E +    L + ++  +SL  L+ +  +L+LP    G   L TL L ++ IT   +++
Sbjct: 158 ---EGRWPFKLNSDVYEAESLKILKLTLCQLDLPPKLKGLHVLNTLVLRKIIITPTLIDT 214

Query: 570 IVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVI----VTDAYAVDIFAPNLKSVHF 737
           +   C  L  L L +C+ +  +K+       KT  V+      +   + I APNL+S H+
Sbjct: 215 LFQNCFFLETLDLAHCHRIFHLKI----FAQKTFKVLKVGDCQEILRIYIDAPNLRSFHY 270

Query: 738 HGDILYGYDFRNVSALEDVFIS 803
            G + +   F +V  L+DV +S
Sbjct: 271 CGHVCF-IKFNSVPQLKDVMLS 291