BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012345
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   316   1e-83
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...   292   2e-76
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   286   1e-74
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   279   1e-72
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...   276   8e-72

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
            vinifera] gi|147843962|emb|CAN83712.1| hypothetical
            protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  316 bits (809), Expect = 1e-83
 Identities = 184/372 (49%), Positives = 220/372 (59%), Gaps = 14/372 (3%)
 Frame = -1

Query: 1221 FNPSMAIIIIVLISAFFFMGFFSIYIRQCAGERQTGGTVXXXXXXXXXXXXXXXGLEPSV 1042
            F+ SMAIII++L++A F MGFFS+YIR C+  R  G                  GL+ +V
Sbjct: 60   FSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGTRGLDQAV 119

Query: 1041 IEKFPTFMYSVVKGLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDAWLASHT 862
            +E FPTF YSVVKGLKIGKG LECAVCLNEFED+ETLRL+PKCDHVFHPECIDAWLASH 
Sbjct: 120  LETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECIDAWLASHV 179

Query: 861  TCPVCRANLTPDSNHPEADGNEVTEAQNQDSESDSDIENQSHH-------SITILDNQTR 703
            TCPVCRANLT  +     D +   EA     ESD D E++          SI + D++T 
Sbjct: 180  TCPVCRANLTEPA--VPTDYSAAVEAAESAGESDHDGEDRRSEINAVREVSIRVADDET- 236

Query: 702  ENSSAPEVINPLQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPE 523
            +   AP+VINP Q   QNRP RS S RP+   KFPRSHSTGHSLIQPGEN ERFTL+LPE
Sbjct: 237  DVQQAPDVINPNQSLHQNRPPRSKSTRPR---KFPRSHSTGHSLIQPGENCERFTLKLPE 293

Query: 522  DIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKYNRFWRLDSKAKS 343
            D+RK+I+   LNRTTSL+  P                          + RF RL+   KS
Sbjct: 294  DVRKQIMKRALNRTTSLLVLP-----RDGSSRQGYRTAGEGSSRGKNFRRFDRLERSGKS 348

Query: 342  DRWVFSMAPPFISRGGSVRRD----DGEGSVKEGNGKSFLT---SVKSVKSPFDCLAVKV 184
            DRW FS+ PPF SR  S++      DGE +      K  LT   S  + + P     V  
Sbjct: 349  DRWTFSITPPFFSRASSLKSPKVAADGEATSSTSPRKPTLTPKASFGAKRDPAGTPPVGS 408

Query: 183  DGEMSSSSRPPV 148
              +   S RPPV
Sbjct: 409  PRQPVGSPRPPV 420


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
            gi|223547072|gb|EEF48569.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 436

 Score =  292 bits (747), Expect = 2e-76
 Identities = 169/384 (44%), Positives = 217/384 (56%), Gaps = 26/384 (6%)
 Frame = -1

Query: 1224 NFNPSMAIIIIVLISAFFFMGFFSIYIRQCAGERQTGGT-----VXXXXXXXXXXXXXXX 1060
            +FNPS+AI++++++SAFF MGFFS+YIRQCA  R   G+                     
Sbjct: 50   SFNPSLAILMVIIVSAFFVMGFFSVYIRQCADRRYRRGSNFNPSASPIGGGGRWSRRRQQ 109

Query: 1059 GLEPSVIEKFPTFMYSVVKGLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDA 880
            GL+P VI  FPTF+YS VKG KIGK +LECAVCLNEFEDD+TLRL PKC HVFHP+CIDA
Sbjct: 110  GLDPEVINTFPTFLYSTVKGHKIGKESLECAVCLNEFEDDQTLRLTPKCSHVFHPDCIDA 169

Query: 879  WLASHTTCPVCRANLTPDSNHPEADGNEVTEAQNQDSES--------DSDIENQSHHSIT 724
            WLAS+TTCPVCRANL P       D     E  N ++ S          + E Q+   I 
Sbjct: 170  WLASNTTCPVCRANLVPKPGDLAFDSVSFFEPNNTNNTSVEPDQLQERPNDETQNGVLIR 229

Query: 723  ILDNQTR-----ENSSAPEVINPLQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPG 559
            + D+  R     +N  +P+VI+ L    QNRP RS S   + +  FPRSHSTGHSL+QPG
Sbjct: 230  VSDDHDRSRPEVQNQQSPDVIS-LSTASQNRPPRSWSTGWRFARLFPRSHSTGHSLVQPG 288

Query: 558  ENMERFTLRLPEDIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKY 379
            EN++RFTLRLPED+R +++N  LNR  S V+FP                          +
Sbjct: 289  ENLDRFTLRLPEDVRSQLLNTHLNRAKSCVAFP-----RASSSKKGYRSRSGGGWRGRNF 343

Query: 378  NRFWRLDSKAKSDRWVFSMAPPFISRGGSVRRDDGEGSVKEGNGKSFLTSVKSVKSPFDC 199
              + R D + + +    ++ PPFISR GS++   G GS  E N       +KS+KSPFD 
Sbjct: 344  YFYERFDEEVRPEHSGLTLTPPFISRTGSIQSSKGVGSNDEANATPPKNFLKSIKSPFDQ 403

Query: 198  LAVKVD--------GEMSSSSRPP 151
            L +  D        GE SS    P
Sbjct: 404  LFLNADKNHSKNDVGERSSDQLRP 427


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
            gi|223548304|gb|EEF49795.1| ring finger protein, putative
            [Ricinus communis]
          Length = 380

 Score =  286 bits (732), Expect = 1e-74
 Identities = 177/386 (45%), Positives = 216/386 (55%), Gaps = 15/386 (3%)
 Frame = -1

Query: 1320 YQILQLLSILKYA--TAQXXXXXXXXXXPYGLPANFNPSMAIIIIVLISAFFFMGFFSIY 1147
            Y ++ + +IL  +  TA           PYG  A   PSMAIII+VLI+A FFMGFFS+Y
Sbjct: 6    YTLISIFTILLASPFTALAQPSPAEARDPYGY-ARVTPSMAIIIVVLIAALFFMGFFSVY 64

Query: 1146 IRQCAGERQTGGTVXXXXXXXXXXXXXXXGLEPSVIEKFPTFMYSVVKGLKIGKGALECA 967
            IR CA                        GL+ +VIE FPT +YS VKGLKIGKGALECA
Sbjct: 65   IRHCANSSNGVSVQGLANGGRSRRAAAARGLDAAVIETFPTLVYSEVKGLKIGKGALECA 124

Query: 966  VCLNEFEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTPDSNHPEADGNEVTE 787
            VCL EFEDDETLRLLPKCDHVFHP+CIDAWLASHTTCPVCR+NLTP    P     E   
Sbjct: 125  VCLCEFEDDETLRLLPKCDHVFHPDCIDAWLASHTTCPVCRSNLTPQPVDPPTQTTESLP 184

Query: 786  AQNQDSESDSDIENQSHHSITILDNQTRENSSAPEVINPLQIPFQNRPGRSGSRRPQISG 607
              + D E+ ++   +      + +N     +  PEV++  Q   +NR   S S RP    
Sbjct: 185  DSSSDLEAQNEAVVELEPQPEVCENAQVAVAPEPEVMSVNQTLNRNRTRGSRSGRP---S 241

Query: 606  KFPRSHSTGHSLIQPGENMERFTLRLPEDIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXX 427
            KFPRSHSTGHSLIQPGEN +RFTLRLP ++RK+I+N +LNRT S+V F            
Sbjct: 242  KFPRSHSTGHSLIQPGENTDRFTLRLPVEVRKQIMNRELNRTMSMVVF-----SRERSSK 296

Query: 426  XXXXXXXXXXXXXGKYNRFWRLDSKAKSDRWVFSMAPPFISRGGS-------------VR 286
                         GKY R  RLD  AKSDR V++  P F++R  S             V 
Sbjct: 297  RGYKTGGGEGSSRGKYKRLERLDQGAKSDRLVYNRTPSFLARASSFLTRASSSVRSPRVA 356

Query: 285  RDDGEGSVKEGNGKSFLTSVKSVKSP 208
              DGEG+     G S   +V+S + P
Sbjct: 357  ASDGEGT---STGPSGPHAVQSNRPP 379


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  279 bits (714), Expect = 1e-72
 Identities = 170/374 (45%), Positives = 210/374 (56%), Gaps = 4/374 (1%)
 Frame = -1

Query: 1305 LLSILKYATAQXXXXXXXXXXPY-GLPANFNPSMAIIIIVLISAFFFMGFFSIYIRQCAG 1129
            LL +L  ATAQ              L   FNPSMAI++I ++SAFFFMGFFS+Y+RQC  
Sbjct: 30   LLPLLSCATAQTAAEQSPPPSELMSLAQKFNPSMAIVMIAIVSAFFFMGFFSVYLRQCIE 89

Query: 1128 ERQTGG-TVXXXXXXXXXXXXXXXGLEPSVIEKFPTFMYSVVKGLKIGKGALECAVCLNE 952
             R  G                   GL  S IE+FPTF+YS VK  KIGK  LECAVCLNE
Sbjct: 90   RRVRGRFNTEIVGIGGHRSWMAARGLNSSDIERFPTFVYSAVKAHKIGKEGLECAVCLNE 149

Query: 951  FEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTPDSNHPEADGNEVTEAQNQD 772
            FEDDETLRLLPKC+HVFH +CID WLASH TCPVCRANLTP           +   + + 
Sbjct: 150  FEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPVCRANLTPKPGEKFCAPVPIFGPETES 209

Query: 771  SESDSDIENQSHHSITILDNQT--RENSSAPEVINPLQIPFQNRPGRSGSRRPQISGKFP 598
             ESD+ +E      I    NQ     ++ +P+V+N  +    NRP RS S R +I+G FP
Sbjct: 210  DESDTRVE------IVETPNQVPIAVDAQSPDVMNHGR-DTPNRPPRSRSIRARITGMFP 262

Query: 597  RSHSTGHSLIQPGENMERFTLRLPEDIRKKIVNGKLNRTTSLVSFPAXXXXXXXXXXXXX 418
            RSHSTGHSLIQPGEN ERFTLRLPE+IR +I+N  L+RT S V+ P              
Sbjct: 263  RSHSTGHSLIQPGENRERFTLRLPEEIRNQIMNTSLSRTKSWVALPG-----VQSSKRGY 317

Query: 417  XXXXXXXXXXGKYNRFWRLDSKAKSDRWVFSMAPPFISRGGSVRRDDGEGSVKEGNGKSF 238
                        Y  + + + + +++R  FSM PPF+ R GS      +G       K  
Sbjct: 318  RANSVGSLRGKTYFNYEQFNGEVRAERLGFSMTPPFVPRTGSSHARSPQGCEGSLTPK-- 375

Query: 237  LTSVKSVKSPFDCL 196
             T  +S+KSPFD L
Sbjct: 376  -TLFRSLKSPFDRL 388


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score =  276 bits (707), Expect = 8e-72
 Identities = 168/348 (48%), Positives = 203/348 (58%), Gaps = 13/348 (3%)
 Frame = -1

Query: 1212 SMAIIIIVLISAFFFMGFFSIYIRQCAGERQTGGTVXXXXXXXXXXXXXXXGLEPSVIEK 1033
            SMA+II++LI+A FFM FFS+YIR C        TV               GL+P+VIE 
Sbjct: 46   SMAVIIVILIAALFFMAFFSVYIRHC--NDSPSNTVRPITAAAGRSRRATRGLDPAVIET 103

Query: 1032 FPTFMYSVVKGLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDAWLASHTTCP 853
            FPT +YS VK  KIGK ALECAVCLNEFEDDETLRL+PKCDHVFHPECIDAWLASH+TCP
Sbjct: 104  FPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCP 163

Query: 852  VCRANLTP---DSNHPEADGNEVTEAQNQDSESDSDIENQSHHSIT-ILDNQTRENSSAP 685
            VCRANL+P   DS H   D N V    N D++   DIE QS+  ++      T +  +  
Sbjct: 164  VCRANLSPQPTDSVHRADDSNAVV---NSDTDG-GDIEAQSNDVVSETTAPPTVQIQTES 219

Query: 684  EVINPLQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKKI 505
            E+         NR    GSR  ++   FPRSHSTGHSL+QPGE+ ERFTLRLP +IRK++
Sbjct: 220  ELSTTTSNKALNRTRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQV 279

Query: 504  VNGKLNRTTSLVSFPAXXXXXXXXXXXXXXXXXXXXXXXGKYNRFWRLDSKAKSDRWVFS 325
            VN KL+R TS+V                             Y R  RLD  +KSDRWV S
Sbjct: 280  VNRKLHRATSMVVLARQSSSMRGYRFGSGEGSSRGKY----YRRLERLDRTSKSDRWVLS 335

Query: 324  MAPPFIS--------RGGSVRRDDGEG-SVKEGNGKSFLTSVKSVKSP 208
            M PPF +        RGGS R + G G  + +GN     T+V S + P
Sbjct: 336  MTPPFFTRMSSMKTPRGGSNRAEPGSGRELGQGN-----TAVDSSRLP 378