BLASTX nr result

ID: Coptis25_contig00012328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012328
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   266   3e-69
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   260   2e-67
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   258   6e-67
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...   258   1e-66
ref|XP_003521518.1| PREDICTED: carbon catabolite repressor prote...   256   2e-66

>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  266 bits (680), Expect = 3e-69
 Identities = 128/171 (74%), Positives = 141/171 (82%)
 Frame = +1

Query: 178 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 357
           MLSV+RVHLPSDIPIVGCELTPYVLL+RPDT+ TTDDVPES+P+DG  LRY+WYRIQ+DR
Sbjct: 1   MLSVIRVHLPSDIPIVGCELTPYVLLRRPDTNATTDDVPESAPLDGHFLRYKWYRIQSDR 60

Query: 358 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 537
           KVAICSVHPSEQATLQCLGCVK K+PVAKSYHCSP+CFSDAWQHHR LH+RAA A+NENG
Sbjct: 61  KVAICSVHPSEQATLQCLGCVKAKLPVAKSYHCSPKCFSDAWQHHRVLHDRAASAINENG 120

Query: 538 TEEEELFGRFXXXXXXXXXXXXXXXXPSIGHNTSLSNGSTPSYPAAVTERS 690
            EEEELFGRF                 S     SL+NGSTP YPAAVT+RS
Sbjct: 121 NEEEELFGRFNSSGSGVMNTSLSGSASS----ASLTNGSTPLYPAAVTQRS 167


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  260 bits (665), Expect = 2e-67
 Identities = 126/171 (73%), Positives = 141/171 (82%)
 Frame = +1

Query: 178 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 357
           MLSVLRVHLPSDIPIVGCELTPYVLL+RPD ++TT+DVPES+P++G  LRY+WYRIQ+DR
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKNLTTEDVPESAPIEGHFLRYKWYRIQSDR 60

Query: 358 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 537
           KVA+CSVHPSE ATLQCLGCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA AVNENG
Sbjct: 61  KVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENG 120

Query: 538 TEEEELFGRFXXXXXXXXXXXXXXXXPSIGHNTSLSNGSTPSYPAAVTERS 690
            EEEELFGRF                PS   + SL+NGS P YPAAVT+RS
Sbjct: 121 NEEEELFGRF---NSTGSGSINTSLAPS-ASSASLANGSAPLYPAAVTQRS 167


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  258 bits (660), Expect = 6e-67
 Identities = 125/171 (73%), Positives = 140/171 (81%)
 Frame = +1

Query: 178 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 357
           MLSVLRVHLPSDIPIVGCELTPYVLL+RPD ++TT+DVPE +P++G  LRY+WYRIQ+DR
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKNLTTEDVPEXAPIEGHFLRYKWYRIQSDR 60

Query: 358 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 537
           KVA+CSVHPSE ATLQCLGCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA AVNENG
Sbjct: 61  KVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENG 120

Query: 538 TEEEELFGRFXXXXXXXXXXXXXXXXPSIGHNTSLSNGSTPSYPAAVTERS 690
            EEEELFGRF                PS   + SL+NGS P YPAAVT+RS
Sbjct: 121 NEEEELFGRF---NSTGSGSINTSLAPS-ASSASLANGSAPLYPAAVTQRS 167


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  258 bits (658), Expect = 1e-66
 Identities = 124/171 (72%), Positives = 137/171 (80%)
 Frame = +1

Query: 178 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 357
           MLSVLRVHLPSDIPIVGCELTPYV+L+RPD    TDDVPES+P+DG  LRY+WYRIQ+DR
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVVLRRPDKDYITDDVPESAPLDGHFLRYKWYRIQSDR 60

Query: 358 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 537
           KVA+CSVHPSE ATLQC+GCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA AVNENG
Sbjct: 61  KVAVCSVHPSEHATLQCIGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENG 120

Query: 538 TEEEELFGRFXXXXXXXXXXXXXXXXPSIGHNTSLSNGSTPSYPAAVTERS 690
            EEEELFGR+                 S     SL+NGSTP YPAAVT+RS
Sbjct: 121 NEEEELFGRYNSSGSGVLNTSLSGSASS----ASLTNGSTPLYPAAVTQRS 167


>ref|XP_003521518.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
           [Glycine max]
          Length = 602

 Score =  256 bits (655), Expect = 2e-66
 Identities = 121/171 (70%), Positives = 138/171 (80%)
 Frame = +1

Query: 178 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 357
           MLSVLRVHLPSDIPIVGCELTPYVLL+RPD ++TTDD PE++P+DG  LRY+WYR+Q+D+
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDFPETAPLDGHFLRYKWYRVQSDK 60

Query: 358 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 537
           KVA+CSVHPSEQA LQCLGCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA A NENG
Sbjct: 61  KVAVCSVHPSEQAALQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAANENG 120

Query: 538 TEEEELFGRFXXXXXXXXXXXXXXXXPSIGHNTSLSNGSTPSYPAAVTERS 690
            EEEEL+GRF                 S   + SL+NGS P YPAAVT+RS
Sbjct: 121 NEEEELYGRF--NNSGSGSGSINTSLSSSASSASLTNGSAPVYPAAVTQRS 169


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