BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012309
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indi...   421   e-115
ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group] g...   419   e-114
gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hy...   417   e-114
ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloro...   412   e-112
ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [S...   408   e-111

>gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indica Group]
          Length = 342

 Score =  421 bits (1082), Expect = e-115
 Identities = 207/278 (74%), Positives = 229/278 (82%)
 Frame = -3

Query: 1065 STVEVASENPLKVXXXXXXXXXXXIAKGLRRQGHNVLATSRTDYSDYCQENGIEFFRNVD 886
            S    A+   L+V           IA G++RQGH VLATSR+DYS YC  +GI FF   D
Sbjct: 64   SPATAAAAGALRVGIVGFGNFGQFIAGGIQRQGHAVLATSRSDYSGYCARHGIRFFATAD 123

Query: 885  SLCEEQPDVLLVCSSILSTETVVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFG 706
             LCE  PDVLLVCSSILSTE VVR+IP  KL+P T+ ADVLSVKQFPRNL LE+LPPGFG
Sbjct: 124  ELCEAGPDVLLVCSSILSTEAVVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPPGFG 183

Query: 705  IVCTHPMFGPESGKDGWTGLPFVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEE 526
            IVCTHPMFGPESGK GW+GLPFVYDKVRV +   Q  KC+QFL IFE EGCRMVEM CEE
Sbjct: 184  IVCTHPMFGPESGKHGWSGLPFVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEMLCEE 243

Query: 525  HDRHAAGSQFITHTIGRILSHLNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNV 346
            HDR+AAGSQFITHTIGRILS LNLESTPINTKGYETLLQLT+NT+SDSFDLYYGLFMYNV
Sbjct: 244  HDRYAAGSQFITHTIGRILSQLNLESTPINTKGYETLLQLTKNTISDSFDLYYGLFMYNV 303

Query: 345  NATDQIENLDRAFETVKQKLFGRLHDILRKQIVERVPL 232
            NAT+QI+NLDRAFE VKQ L+GRLH++LRKQIVERVP+
Sbjct: 304  NATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIVERVPI 341


>ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group]
            gi|53793078|dbj|BAD54288.1| putative arogenate
            dehydrogenase isoform 2 [Oryza sativa Japonica Group]
            gi|113595847|dbj|BAF19721.1| Os06g0542200 [Oryza sativa
            Japonica Group] gi|215765048|dbj|BAG86745.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222635711|gb|EEE65843.1| hypothetical protein
            OsJ_21611 [Oryza sativa Japonica Group]
          Length = 342

 Score =  419 bits (1076), Expect = e-114
 Identities = 206/278 (74%), Positives = 228/278 (82%)
 Frame = -3

Query: 1065 STVEVASENPLKVXXXXXXXXXXXIAKGLRRQGHNVLATSRTDYSDYCQENGIEFFRNVD 886
            S    A+   L+V           IA G++RQGH VLATSR+DYS YC  +GI FF   D
Sbjct: 64   SPATAAAAGALRVGIVGFGNFGQFIAGGIQRQGHAVLATSRSDYSGYCARHGIRFFATAD 123

Query: 885  SLCEEQPDVLLVCSSILSTETVVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFG 706
             LCE  PDVLLVCSSILSTE VVR+IP  KL+P T+ ADVLSVKQFPRNL LE+LPPGFG
Sbjct: 124  ELCEAGPDVLLVCSSILSTEAVVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPPGFG 183

Query: 705  IVCTHPMFGPESGKDGWTGLPFVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEE 526
            IVCTHPMFGPESGK GW+GLPFVYDKVRV +   Q  KC+QFL IFE EGCRMVEM CEE
Sbjct: 184  IVCTHPMFGPESGKHGWSGLPFVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEMLCEE 243

Query: 525  HDRHAAGSQFITHTIGRILSHLNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNV 346
            HDR+AAGSQFITHTIGRILS LNLESTPINTKGYETLLQLT+NT+SDSFDLYYGLFMYNV
Sbjct: 244  HDRYAAGSQFITHTIGRILSQLNLESTPINTKGYETLLQLTKNTISDSFDLYYGLFMYNV 303

Query: 345  NATDQIENLDRAFETVKQKLFGRLHDILRKQIVERVPL 232
            NAT+QI+NLDRAFE VKQ L+GRLH++LRKQI ERVP+
Sbjct: 304  NATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIEERVPI 341


>gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hypothetical protein
            ZEAMMB73_026457 [Zea mays]
          Length = 392

 Score =  417 bits (1072), Expect = e-114
 Identities = 205/293 (69%), Positives = 233/293 (79%)
 Frame = -3

Query: 1038 PLKVXXXXXXXXXXXIAKGLRRQGHNVLATSRTDYSDYCQENGIEFFRNVDSLCEEQPDV 859
            PL+V           IA G++RQGH VLA SRTDYS YC ++GI FFR+VD+LCEEQPDV
Sbjct: 85   PLRVGIVGFGNFGQFIAGGVQRQGHTVLAASRTDYSAYCAQHGIRFFRSVDALCEEQPDV 144

Query: 858  LLVCSSILSTETVVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFG 679
            LL+CSSILSTE+VVR+IP HKL+PDTI ADVLSVK+FPRNL LEVLPPGFGI+CTHPMFG
Sbjct: 145  LLICSSILSTESVVRAIPFHKLRPDTIVADVLSVKEFPRNLLLEVLPPGFGIICTHPMFG 204

Query: 678  PESGKDGWTGLPFVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQ 499
            PESGK GW  LPFV+DKVRV  +  Q   CD+FL IFE EGCRMVEMSC EHDR+AAGSQ
Sbjct: 205  PESGKHGWGKLPFVFDKVRVADDGDQAATCDRFLSIFEQEGCRMVEMSCAEHDRYAAGSQ 264

Query: 498  FITHTIGRILSHLNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENL 319
            FITHTIGR+LS LNL STPINTKGYETLLQLT+NTVSDSFDLYYGLFMYN+NAT+Q++ L
Sbjct: 265  FITHTIGRVLSQLNLSSTPINTKGYETLLQLTQNTVSDSFDLYYGLFMYNINATEQLDRL 324

Query: 318  DRAFETVKQKLFGRLHDILRKQIVERVPLQGSPPRTKESHPAPLFLPNAEKMN 160
            + AFE V+Q L GRLHD +RKQIVER    G     + S PA   L    + N
Sbjct: 325  EMAFEKVRQMLSGRLHDFIRKQIVERADPSGKLANGRSSSPAAHHLSTLTEEN 377


>ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like
            [Brachypodium distachyon]
          Length = 361

 Score =  412 bits (1059), Expect = e-112
 Identities = 201/269 (74%), Positives = 226/269 (84%)
 Frame = -3

Query: 1038 PLKVXXXXXXXXXXXIAKGLRRQGHNVLATSRTDYSDYCQENGIEFFRNVDSLCEEQPDV 859
            PL+V           IA+G++RQGH VLATSR+DYS YC   GI +FR++++LCEEQP+V
Sbjct: 93   PLRVGIIGFGNFGQFIARGIQRQGHAVLATSRSDYSAYCSAQGIRYFRSLEALCEEQPNV 152

Query: 858  LLVCSSILSTETVVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFG 679
            LLVCSSILSTE VVR+IP HKL+ DTI ADVLSVKQFPRNL LE+LPP FGIVCTHPMFG
Sbjct: 153  LLVCSSILSTEAVVRAIPFHKLRSDTIVADVLSVKQFPRNLLLEILPPEFGIVCTHPMFG 212

Query: 678  PESGKDGWTGLPFVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQ 499
            PESGK GW+ LPFVYDKVR+     Q   C QFL IFE EGCRMVEMSC EHDRHAA SQ
Sbjct: 213  PESGKHGWSTLPFVYDKVRLADKGDQKANCGQFLSIFEGEGCRMVEMSCAEHDRHAAASQ 272

Query: 498  FITHTIGRILSHLNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENL 319
            FITHTIGR+L+ LNL+STPINTKG+E LL+LTENTVSDSFDLYYGLFMYNVNAT+QIE L
Sbjct: 273  FITHTIGRVLAQLNLKSTPINTKGFEALLKLTENTVSDSFDLYYGLFMYNVNATEQIEKL 332

Query: 318  DRAFETVKQKLFGRLHDILRKQIVERVPL 232
            +RAFE VKQ L+GRLHDILRKQIVERVP+
Sbjct: 333  ERAFEKVKQMLYGRLHDILRKQIVERVPI 361


>ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [Sorghum bicolor]
            gi|241915340|gb|EER88484.1| hypothetical protein
            SORBIDRAFT_10g021300 [Sorghum bicolor]
          Length = 382

 Score =  408 bits (1048), Expect = e-111
 Identities = 212/318 (66%), Positives = 240/318 (75%), Gaps = 6/318 (1%)
 Frame = -3

Query: 1143 TKLKLTCSTPRLNHIINHANNSCDQVSTVEVASEN------PLKVXXXXXXXXXXXIAKG 982
            T   LT  +P   H+   A   C  +S    AS        PL+V           IA G
Sbjct: 53   TAKALTSPSPVEQHL--QAVVPCHGISDPPAASSAAAVPAAPLRVGIVGFGNFGQFIAGG 110

Query: 981  LRRQGHNVLATSRTDYSDYCQENGIEFFRNVDSLCEEQPDVLLVCSSILSTETVVRSIPM 802
            L+RQGH VLA SR+DYS YC  +GI FFR+VD+LCEEQPDVLL+CSSILSTE VVR+IP 
Sbjct: 111  LQRQGHVVLAASRSDYSVYCASHGIRFFRSVDALCEEQPDVLLICSSILSTEGVVRAIPF 170

Query: 801  HKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFGPESGKDGWTGLPFVYDKVR 622
             KL+ DTI ADVLSVK+FPRNL LEVLPPGFGI+CTHPMFGPESGK GW  LPFV+DKVR
Sbjct: 171  RKLRHDTIVADVLSVKEFPRNLLLEVLPPGFGIICTHPMFGPESGKHGWGKLPFVFDKVR 230

Query: 621  VDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQFITHTIGRILSHLNLESTP 442
            V ++  Q  KCDQFL IFE EGCRMVEMSC EHDR+AAGSQFITHTIGR+LS LNL+STP
Sbjct: 231  VAEDGDQAAKCDQFLSIFEQEGCRMVEMSCAEHDRYAAGSQFITHTIGRVLSQLNLKSTP 290

Query: 441  INTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENLDRAFETVKQKLFGRLHDIL 262
            INTKGYETLLQLT+NTVSDSFDLYYGLFMYNVNAT+Q++ L+ AFE V+Q L GRLHD +
Sbjct: 291  INTKGYETLLQLTKNTVSDSFDLYYGLFMYNVNATEQLDKLEMAFEKVRQMLSGRLHDFI 350

Query: 261  RKQIVERVPLQGSPPRTK 208
            RKQIVER     + P  K
Sbjct: 351  RKQIVERAAHVPADPSGK 368