BLASTX nr result
ID: Coptis25_contig00012295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00012295
(1496 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chlorop... 758 0.0
ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ric... 762 0.0
ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. ly... 744 0.0
ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|2... 741 0.0
gb|AAL06875.1| AT5g64050/MHJ24_3 [Arabidopsis thaliana] gi|17064... 740 0.0
>ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chloroplastic/mitochondrial
[Vitis vinifera] gi|297744457|emb|CBI37719.3| unnamed
protein product [Vitis vinifera]
Length = 566
Score = 758 bits (1956), Expect(2) = 0.0
Identities = 362/438 (82%), Positives = 400/438 (91%)
Frame = +1
Query: 181 WDEGPGIGGDYGPYRQSERNSLYKHYADKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPP 360
WDEGPG+GGDYGPYRQSERNSLYK YA+KLL+SGHVY+CFCSNEEL KMKEIA+LKQLPP
Sbjct: 116 WDEGPGVGGDYGPYRQSERNSLYKQYAEKLLESGHVYQCFCSNEELEKMKEIAKLKQLPP 175
Query: 361 VYAGKWATADDDQVQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMR 540
VY GKWA+A ++VQ ELE+GTPYTYRFRVPKEG+LKI+DLIRGEV W L+TLGDFVIMR
Sbjct: 176 VYTGKWASATAEEVQEELERGTPYTYRFRVPKEGSLKIDDLIRGEVRWNLDTLGDFVIMR 235
Query: 541 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPD 720
SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQAL+YKALGF MP FAHVSLILAPD
Sbjct: 236 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALLYKALGFAMPSFAHVSLILAPD 295
Query: 721 RSKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNK 900
RSKLSKRHGATSVGQFKEMG+LP AMVNYLALLGWGDGTENEFFTL+ LVEKFSIDRVNK
Sbjct: 296 RSKLSKRHGATSVGQFKEMGFLPQAMVNYLALLGWGDGTENEFFTLKHLVEKFSIDRVNK 355
Query: 901 SGAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGID 1080
GAIFDS K RWMNGQHLR+LPSE+L KL+GE+WK GIL +S+G F++EA LLKDGID
Sbjct: 356 GGAIFDSTKLRWMNGQHLRSLPSEELTKLIGERWKNTGILTQSDGPFIEEAVALLKDGID 415
Query: 1081 LVTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTG 1260
L+TDSDK LS LLSYPL++TL SPEGKPVLEDKLSEV++ LL+AYD+GEL ALEEG G
Sbjct: 416 LITDSDKALSNLLSYPLYATLTSPEGKPVLEDKLSEVSSSLLAAYDSGELLQALEEGPAG 475
Query: 1261 WQKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFIT 1440
WQKWVKSFGKS+KRKGKSLFMPLRVLLTGKLHGPDMG SV+LLH+AG G+VAPQ GF+T
Sbjct: 476 WQKWVKSFGKSLKRKGKSLFMPLRVLLTGKLHGPDMGASVLLLHRAGTCGVVAPQVGFVT 535
Query: 1441 LDERLKMLREVNWDGFNK 1494
L++R KMLREV W+ NK
Sbjct: 536 LEDRFKMLREVEWEALNK 553
Score = 82.8 bits (203), Expect(2) = 0.0
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +2
Query: 2 GGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPG 121
GGKFVLRIEDTDLERSTK+SE A+LQDLSWLGLHWDEGPG
Sbjct: 82 GGKFVLRIEDTDLERSTKQSEEALLQDLSWLGLHWDEGPG 121
>ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
gi|223527811|gb|EEF29910.1| glutamyl-tRNA synthetase 1,
2, putative [Ricinus communis]
Length = 577
Score = 762 bits (1967), Expect(2) = 0.0
Identities = 368/438 (84%), Positives = 401/438 (91%)
Frame = +1
Query: 181 WDEGPGIGGDYGPYRQSERNSLYKHYADKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPP 360
WDEGP +GGDYGPYRQSERNSLYK YADKLL+S HVYRCFCSNEEL KMKEIA+LKQLPP
Sbjct: 127 WDEGPHVGGDYGPYRQSERNSLYKQYADKLLNSAHVYRCFCSNEELEKMKEIAKLKQLPP 186
Query: 361 VYAGKWATADDDQVQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMR 540
VY+GKWATA D++VQ EL K TPYTYRFRVPKEG+LKI DLIRGEVSW L+TLGDFVIMR
Sbjct: 187 VYSGKWATATDEEVQEELAKATPYTYRFRVPKEGSLKINDLIRGEVSWNLDTLGDFVIMR 246
Query: 541 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPD 720
SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMP FAHVSLILAPD
Sbjct: 247 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPLFAHVSLILAPD 306
Query: 721 RSKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNK 900
RSKLSKRHGATSVGQF+EMGYLP AMVNYLALLGWGDGTENEFFTL QLVEKFSI RVNK
Sbjct: 307 RSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLDQLVEKFSIGRVNK 366
Query: 901 SGAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGID 1080
SGAIFDS K RWMNGQHLRAL SE+L+ L+GE+WK GILVESEG+F++EA +LLKDGID
Sbjct: 367 SGAIFDSTKLRWMNGQHLRALSSEKLINLIGERWKSIGILVESEGSFIEEAVQLLKDGID 426
Query: 1081 LVTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTG 1260
LVTDSDK LS LLSYPLH+TL SPEGK V+EDKL EV++ LL+AYD+GEL ALEEG +G
Sbjct: 427 LVTDSDKALSNLLSYPLHATLVSPEGKTVVEDKLFEVSSSLLAAYDSGELLSALEEGPSG 486
Query: 1261 WQKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFIT 1440
WQKWVK+FGKSMKRKGKSLFMPLR+LLTGKLHGPDMG SVILLHKAG G+V+PQAGF+T
Sbjct: 487 WQKWVKNFGKSMKRKGKSLFMPLRLLLTGKLHGPDMGASVILLHKAGNCGIVSPQAGFVT 546
Query: 1441 LDERLKMLREVNWDGFNK 1494
L ER +MLR+V+W+ NK
Sbjct: 547 LSERFEMLRQVDWEALNK 564
Score = 75.9 bits (185), Expect(2) = 0.0
Identities = 34/39 (87%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGP 118
GGKFVLRIEDTDLERSTKESE+A+L+DL+WLGL WDEGP
Sbjct: 93 GGKFVLRIEDTDLERSTKESEDALLRDLTWLGLDWDEGP 131
>ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata]
gi|297312424|gb|EFH42848.1| ATERS/ERS/OVA3 [Arabidopsis
lyrata subsp. lyrata]
Length = 570
Score = 744 bits (1921), Expect(2) = 0.0
Identities = 351/438 (80%), Positives = 396/438 (90%)
Frame = +1
Query: 181 WDEGPGIGGDYGPYRQSERNSLYKHYADKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPP 360
WDEGPG+ GD+GPYRQSERN+LYK YA+KLL+SGHVYRCFCS+EEL KMKEIA+LKQLPP
Sbjct: 119 WDEGPGVSGDFGPYRQSERNALYKQYAEKLLESGHVYRCFCSSEELVKMKEIAKLKQLPP 178
Query: 361 VYAGKWATADDDQVQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMR 540
VY GKWATA D +++ ELEKGTP+TYRFRVPKEG+LKI DLIRGEV W L+TLGDFV+MR
Sbjct: 179 VYTGKWATASDSEIEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDFVVMR 238
Query: 541 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPD 720
SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKAL FPMP FAHVSLILAPD
Sbjct: 239 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALEFPMPQFAHVSLILAPD 298
Query: 721 RSKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNK 900
RSKLSKRHGATSVGQ++EMGYLP MVNYLALLGWGDGTENEFFTL++LVEKFSI+RVNK
Sbjct: 299 RSKLSKRHGATSVGQYREMGYLPQGMVNYLALLGWGDGTENEFFTLEELVEKFSIERVNK 358
Query: 901 SGAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGID 1080
SGAIFDS K RWMNGQHLRALP E+L KL+GE+WK AGIL ESEG+FV EA ELLKDGI+
Sbjct: 359 SGAIFDSTKLRWMNGQHLRALPKEKLAKLVGERWKSAGILTESEGSFVDEAVELLKDGIE 418
Query: 1081 LVTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTG 1260
LVTDSDKVL LLSYPLH+TLASPE K +EDKL EVA L++AYD+GE+ ALEEG
Sbjct: 419 LVTDSDKVLLNLLSYPLHATLASPEAKSAVEDKLHEVAASLIAAYDSGEIPSALEEGQGA 478
Query: 1261 WQKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFIT 1440
WQKWVK+FGKS+KRKGKSLFMPLRVLLTGKLHGP+MG S++L+HKAG G+V PQAGF++
Sbjct: 479 WQKWVKAFGKSLKRKGKSLFMPLRVLLTGKLHGPEMGTSIVLIHKAGSSGIVVPQAGFVS 538
Query: 1441 LDERLKMLREVNWDGFNK 1494
++ER K+LRE++W+ NK
Sbjct: 539 MEERFKILREIDWEALNK 556
Score = 79.7 bits (195), Expect(2) = 0.0
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2
Query: 2 GGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPG 121
GGKFVLRIEDTDLERST+ESE AVLQDLSWLGL WDEGPG
Sbjct: 85 GGKFVLRIEDTDLERSTRESEAAVLQDLSWLGLDWDEGPG 124
>ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|222849979|gb|EEE87526.1|
predicted protein [Populus trichocarpa]
Length = 574
Score = 741 bits (1912), Expect(2) = 0.0
Identities = 356/438 (81%), Positives = 400/438 (91%)
Frame = +1
Query: 181 WDEGPGIGGDYGPYRQSERNSLYKHYADKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPP 360
WDEGPG+GGDYGPYRQSERNSLYK +A+KL++SGHVYRCFCSNEEL +MKEIA+LKQLPP
Sbjct: 124 WDEGPGVGGDYGPYRQSERNSLYKQHAEKLVESGHVYRCFCSNEELEQMKEIAKLKQLPP 183
Query: 361 VYAGKWATADDDQVQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMR 540
VY GKWA A DD+VQ EL KGTPYTYRFRVPKEG L I DLIRGEVSW +TLGDFVIMR
Sbjct: 184 VYTGKWANAMDDEVQEELAKGTPYTYRFRVPKEGRLTINDLIRGEVSWNYDTLGDFVIMR 243
Query: 541 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPD 720
SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMP+FAHVSLILAPD
Sbjct: 244 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPHFAHVSLILAPD 303
Query: 721 RSKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNK 900
RSKLSKRHGATSVGQ++EMGYLP AMVNYLALLGWGDGTENEFFTL+QLVEKFSI RVNK
Sbjct: 304 RSKLSKRHGATSVGQYREMGYLPRAMVNYLALLGWGDGTENEFFTLEQLVEKFSIGRVNK 363
Query: 901 SGAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGID 1080
SGA+FDS K RWMNGQHLRALPS++L KL+GE+WK +GILVESEG F++EA LLKDGI+
Sbjct: 364 SGAVFDSTKLRWMNGQHLRALPSDKLNKLVGERWKSSGILVESEGPFIEEAVLLLKDGIE 423
Query: 1081 LVTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTG 1260
LVTDSDKVLS LLSYPLH+TL+SPEGK ++++KLSEV++ LL+AYD+GEL ALEEGH+G
Sbjct: 424 LVTDSDKVLSNLLSYPLHATLSSPEGKVMIQNKLSEVSSGLLAAYDSGELLNALEEGHSG 483
Query: 1261 WQKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFIT 1440
WQKWVK+FGK+MK KGKSLFMPLRVLLTGKLHGPDMG S+ILLH+AG +V+ QA F+T
Sbjct: 484 WQKWVKNFGKTMKLKGKSLFMPLRVLLTGKLHGPDMGSSIILLHQAGTGDMVSSQAEFVT 543
Query: 1441 LDERLKMLREVNWDGFNK 1494
L ER +LRE++W+ NK
Sbjct: 544 LKERFGVLREIDWEALNK 561
Score = 80.1 bits (196), Expect(2) = 0.0
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2
Query: 2 GGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPG 121
GGKFVLRIEDTDLERSTKESE AVL+DLSWLGL WDEGPG
Sbjct: 90 GGKFVLRIEDTDLERSTKESEEAVLRDLSWLGLDWDEGPG 129
>gb|AAL06875.1| AT5g64050/MHJ24_3 [Arabidopsis thaliana] gi|17064968|gb|AAL32638.1|
glutamate-tRNA ligase [Arabidopsis thaliana]
gi|21387183|gb|AAM47995.1| glutamate-tRNA ligase
[Arabidopsis thaliana]
Length = 570
Score = 740 bits (1911), Expect(2) = 0.0
Identities = 350/438 (79%), Positives = 396/438 (90%)
Frame = +1
Query: 181 WDEGPGIGGDYGPYRQSERNSLYKHYADKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPP 360
WDEGPG+ GD+GPYRQSERN+LYK YA+KLL+SGHVYRCFCS+EEL KMKE A+LKQLPP
Sbjct: 119 WDEGPGVSGDFGPYRQSERNALYKQYAEKLLESGHVYRCFCSSEELVKMKENAKLKQLPP 178
Query: 361 VYAGKWATADDDQVQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMR 540
VY GKWATA D +++ ELEKGTP+TYRFRVPKEG+LKI DLIRGEV W L+TLGDFV+MR
Sbjct: 179 VYTGKWATASDAEIEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDFVVMR 238
Query: 541 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPD 720
SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKAL FPMP FAHVSLILAPD
Sbjct: 239 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALKFPMPQFAHVSLILAPD 298
Query: 721 RSKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNK 900
RSKLSKRHGATSVGQ++EMGYLP MVNYLALLGWGDGTENEFFTL+ LVEKFSI+RVNK
Sbjct: 299 RSKLSKRHGATSVGQYREMGYLPQGMVNYLALLGWGDGTENEFFTLEDLVEKFSIERVNK 358
Query: 901 SGAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGID 1080
SGAIFDS K RWMNGQHLRALP+E+L KL+GE+WK AGIL ESEG+FV EA ELLKDGI+
Sbjct: 359 SGAIFDSTKLRWMNGQHLRALPNEKLTKLVGERWKSAGILTESEGSFVNEAVELLKDGIE 418
Query: 1081 LVTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTG 1260
LVTDSDKVL LLSYPLH+TLASPE KP +EDKL EVA L++AYD+GE+ ALEEG
Sbjct: 419 LVTDSDKVLLNLLSYPLHATLASPEAKPAVEDKLHEVAASLIAAYDSGEIPSALEEGQGA 478
Query: 1261 WQKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFIT 1440
WQKWVK+FGKS+KRKGKSLFMPLRVLLTGKLHGP+MG S++L++KAG G+V PQAGF++
Sbjct: 479 WQKWVKAFGKSLKRKGKSLFMPLRVLLTGKLHGPEMGTSIVLIYKAGSPGIVVPQAGFVS 538
Query: 1441 LDERLKMLREVNWDGFNK 1494
++ER K+LRE++W+ NK
Sbjct: 539 MEERFKILREIDWEALNK 556
Score = 79.7 bits (195), Expect(2) = 0.0
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +2
Query: 2 GGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPG 121
GGKFVLRIEDTDLERST+ESE AVLQDLSWLGL WDEGPG
Sbjct: 85 GGKFVLRIEDTDLERSTRESEAAVLQDLSWLGLDWDEGPG 124