BLASTX nr result

ID: Coptis25_contig00012283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012283
         (1629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [...   314   5e-83
ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [...   310   9e-82
ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2...   307   6e-81
ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [...   304   5e-80
ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [...   298   2e-78

>ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  314 bits (804), Expect = 5e-83
 Identities = 195/461 (42%), Positives = 246/461 (53%), Gaps = 35/461 (7%)
 Frame = +1

Query: 103  RSSIQIRK---EKIK--PMQLRKTKSDIREFESEKKPMHKRKTKSALDKRXXXXXXXXXX 267
            +S IQ+RK   E+I+  P QLRK+KS++ E  +EK P+  RK KS   K           
Sbjct: 82   KSPIQLRKMRSEEIERSPNQLRKSKSEMVE-RNEKTPVQLRKVKSESVKTIVDDNAKAIV 140

Query: 268  XXXXKN------------------------------QSETPGTRSDSYNCNELGVCIEKL 357
                KN                              + E P   +++Y C E GVC+   
Sbjct: 141  VVGGKNGGNSEHLQCPESESNEELSEIEKGIHGSVKEIEKPQVENETY-CKEFGVCLIST 199

Query: 358  NSSTLRTEEQIEIEGVVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSFDVKEVDIQQ 537
             +  ++  +++ I                                   +SFD+KE+++  
Sbjct: 200  MAGPIKPTQEVSIND--------NENEANEEEETEEEEEDGDDNEIEKESFDIKEINLP- 250

Query: 538  VEHKKVVNEENNKVDLIRVEKPLLIFSNVIRPSPQVSYYARINPESTKAPPVWDEFERLQ 717
             E KK+VNE      +   EKP+                    P S+K      E+   Q
Sbjct: 251  -EPKKIVNEVKKFHQIY--EKPV--------------------PHSSKPTYTSKEYHNFQ 287

Query: 718  ETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFSLISAVSYVGLFYLAAT 897
            E  +KLQ++VDL+MWK+V +SAFV             T D+N S IS VSYVGLFYLAAT
Sbjct: 288  EKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISCSYTNDINISFISVVSYVGLFYLAAT 347

Query: 898  FFYKSILCRGSIDVDEESNQRYLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLK 1077
            F Y+SI+CRG+ID++   N R +VGEEEAIW+L L+LPY N           GDPATT+K
Sbjct: 348  FLYRSIICRGAIDME---NVRNVVGEEEAIWVLKLLLPYLNEFLLKVRALFCGDPATTMK 404

Query: 1078 LAVTLFILARCGGSITVWKMAKLGFFAVFTVPKVCSSYSTQLTAYGYFWIRRFCDAWNSC 1257
            LAV LF  ARCG SITVWK+AK GFF VFT+PK+CSSYS+ L AY  FWIRRF DAW SC
Sbjct: 405  LAVLLFASARCGSSITVWKVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESC 464

Query: 1258 KHKKAVAAAIFTLVWNLSSVSARVWAAFMLVVAIRYYQQSL 1380
             HKK VA AIF LVWNLSSV ARVWAAFML VA RYYQQS+
Sbjct: 465  SHKKGVALAIFVLVWNLSSVVARVWAAFMLFVAFRYYQQSI 505


>ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  310 bits (793), Expect = 9e-82
 Identities = 194/461 (42%), Positives = 245/461 (53%), Gaps = 35/461 (7%)
 Frame = +1

Query: 103  RSSIQIRK---EKIK--PMQLRKTKSDIREFESEKKPMHKRKTKSALDKRXXXXXXXXXX 267
            +S IQ+RK   E+I+  P QLRK+KS++ E  +EK P+  RK KS   K           
Sbjct: 82   KSPIQLRKMRSEEIERSPNQLRKSKSEMVE-RNEKTPVQLRKVKSESVKTIVDDNAKAIV 140

Query: 268  XXXXKN------------------------------QSETPGTRSDSYNCNELGVCIEKL 357
                KN                              + E P   +++Y C E GVC+   
Sbjct: 141  VVGGKNGGNSEHLQCPESESNEELSEIEKGIHGSVKEIEKPQVENETY-CKEFGVCLIST 199

Query: 358  NSSTLRTEEQIEIEGVVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSFDVKEVDIQQ 537
             +  ++  +++ I                                   +SFD+KE+++  
Sbjct: 200  MAGPIKPTQEVSIND--------NENEANEEEETEEEEEDGDDNEIEKESFDIKEINLP- 250

Query: 538  VEHKKVVNEENNKVDLIRVEKPLLIFSNVIRPSPQVSYYARINPESTKAPPVWDEFERLQ 717
             E KK+VNE      +   EKP+                    P S+K      E+   Q
Sbjct: 251  -EPKKIVNEVKKFHQIY--EKPV--------------------PHSSKPTYTSKEYHNFQ 287

Query: 718  ETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFSLISAVSYVGLFYLAAT 897
            E  +KLQ++VDL+MWK+V +SAFV             T D+N S IS VSYVGLFYLAAT
Sbjct: 288  EKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYTNDINISFISVVSYVGLFYLAAT 347

Query: 898  FFYKSILCRGSIDVDEESNQRYLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLK 1077
            F Y+SI+ RG+ID++   N R +VGEEEAIW+L L+LPY N           GDPATT+K
Sbjct: 348  FLYRSIIYRGAIDME---NVRNVVGEEEAIWVLKLLLPYLNEFLLKVRALFCGDPATTMK 404

Query: 1078 LAVTLFILARCGGSITVWKMAKLGFFAVFTVPKVCSSYSTQLTAYGYFWIRRFCDAWNSC 1257
            LAV LF  ARCG SITVWK+AK GFF VFT+PK+CSSYS+ L AY  FWIRRF DAW SC
Sbjct: 405  LAVLLFASARCGSSITVWKVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRDAWESC 464

Query: 1258 KHKKAVAAAIFTLVWNLSSVSARVWAAFMLVVAIRYYQQSL 1380
             HKK VA AIF LVWNLSSV ARVWAAFML VA RYYQQS+
Sbjct: 465  SHKKGVALAIFVLVWNLSSVVARVWAAFMLFVAFRYYQQSI 505


>ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  307 bits (786), Expect = 6e-81
 Identities = 159/305 (52%), Positives = 206/305 (67%), Gaps = 12/305 (3%)
 Frame = +1

Query: 502  QSFDVKEVDIQQVEHKKVV-NEENNKV----DLIRVEKPLLI-----FSNVIRPSPQVSY 651
            +S D+KE++I + + KKV  N+ NN+      ++  + P +I     + N+ + +P  S 
Sbjct: 195  KSLDIKEINIAEEKPKKVEKNQFNNRTAPASSIVNKQPPPVIKRATLYQNLAKAAPNPSI 254

Query: 652  YARINPESTKAPPVWDEFERLQETQ--SKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXX 825
                        PV +E++  +ET+  SKLQN+VDLVMW+DV +S               
Sbjct: 255  ------------PVANEYQNFKETRRHSKLQNLVDLVMWRDVSRSTLAFGMGTFIIISSS 302

Query: 826  XTKDLNFSLISAVSYVGLFYLAATFFYKSILCRGSIDVDEESNQRYLVGEEEAIWLLHLI 1005
             TKDLN S IS +SY+GL YLA  F Y+S++CRG ID+D++ +  Y++GE EAIWLL L+
Sbjct: 303  YTKDLNVSFISVMSYLGLVYLATIFLYRSLICRGVIDIDDDGS--YVLGEGEAIWLLKLV 360

Query: 1006 LPYFNXXXXXXXXXXSGDPATTLKLAVTLFILARCGGSITVWKMAKLGFFAVFTVPKVCS 1185
            LPY N          SGDPATT+K+AV LF+ ARCG SIT+WKMA+LGFF VFTVPKVCS
Sbjct: 361  LPYLNECLLKIRALFSGDPATTMKMAVLLFVFARCGSSITIWKMARLGFFGVFTVPKVCS 420

Query: 1186 SYSTQLTAYGYFWIRRFCDAWNSCKHKKAVAAAIFTLVWNLSSVSARVWAAFMLVVAIRY 1365
            SYSTQLTAYG FWIRRF DAW SC HKKAVA  IFTLVWNLSS+ AR+WA FM+ VA+RY
Sbjct: 421  SYSTQLTAYGKFWIRRFRDAWESCSHKKAVALCIFTLVWNLSSMVARIWAVFMMFVAVRY 480

Query: 1366 YQQSL 1380
            YQQ++
Sbjct: 481  YQQTM 485


>ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 608

 Score =  304 bits (778), Expect = 5e-80
 Identities = 186/464 (40%), Positives = 250/464 (53%), Gaps = 34/464 (7%)
 Frame = +1

Query: 85   ATDVIDRSSIQIRKEKIK---PMQ-----LRKTKSD-IREFESEK--KPMHKRKTKSALD 231
            ++D + +S I  RK++ +   P +     LRK KSD ++  +       +  RK K  LD
Sbjct: 107  SSDSVKKSPIPARKKRSEVGEPFEKNVGKLRKNKSDSVKNVDDGNGGNAIQPRKDKPELD 166

Query: 232  KRXXXXXXXXXXXXXXKNQSETPGTRSDSYNCNELGVCIEKLNSSTLRTEEQIEIEGVVV 411
                            +N  +     SD  NC + GVC+EK+ SS       I+   V V
Sbjct: 167  HVLNESRNDGLAGGSGRNVIDNGKNDSDG-NCKDFGVCLEKVISSNSDNVGMIKCSPVHV 225

Query: 412  HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSFDVKEVDI------QQVEHKKVVNEENN 573
                                           SFDVKE+ +       + E K+VVN    
Sbjct: 226  DGDFDDVVVDDEEEDEEIDVEMEKG------SFDVKEISVPESKVVNEPERKEVVNVPAK 279

Query: 574  KVDLIRVEKPLLIFSN---------------VIRPSPQVSYYARINPESTKAP--PVWDE 702
            +  +   E   ++ +N                ++PSP +   + I+   +KA   P  +E
Sbjct: 280  QKIVNEPEPKKVVTTNRQFHQKNERPVSIPIAVKPSPPIRKLSTIHQNFSKADSIPKAEE 339

Query: 703  FERLQETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFSLISAVSYVGLF 882
            +    ++Q+KLQ++VDL+MW++V +SAF+              KD+N SLIS +SY+GL 
Sbjct: 340  YYCFPQSQNKLQSLVDLIMWREVSRSAFIFGIGTFTIVSSSYAKDINLSLISVMSYIGLV 399

Query: 883  YLAATFFYKSILCRGSIDVDEESNQRYLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDP 1062
            YLA  F Y+S++CRG IDVD+ +   Y++GEEEAIW+L LILPY N          SGDP
Sbjct: 400  YLAVIFLYRSLICRGVIDVDDTN---YVLGEEEAIWVLRLILPYLNEFLSKLRAMFSGDP 456

Query: 1063 ATTLKLAVTLFILARCGGSITVWKMAKLGFFAVFTVPKVCSSYSTQLTAYGYFWIRRFCD 1242
             TT+KLAV LF+LARCG SIT+WKMAK GFF VFT PK+CSSYS QLTA+  FWIRRF D
Sbjct: 457  GTTIKLAVLLFVLARCGSSITIWKMAKFGFFGVFTGPKICSSYSAQLTAFANFWIRRFRD 516

Query: 1243 AWNSCKHKKAVAAAIFTLVWNLSSVSARVWAAFMLVVAIRYYQQ 1374
            AW SC HKKAVA  IF LVWNLSSV AR+W+ F+L VA RYYQQ
Sbjct: 517  AWVSCSHKKAVALGIFGLVWNLSSVVARIWSVFVLFVAFRYYQQ 560


>ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 589

 Score =  298 bits (764), Expect = 2e-78
 Identities = 186/470 (39%), Positives = 251/470 (53%), Gaps = 19/470 (4%)
 Frame = +1

Query: 22   ENSGGGSVSFRAYGRSRRIQNATDVIDRSSIQIRKEKI--------KPMQLRKTKSDIRE 177
            + +GG S S +   + + +  ++D I +S IQ RK++            +LRK KSD+ +
Sbjct: 90   QKNGGNSSSSQ---QCKDLNISSDSIKKSPIQARKKRSGVGESFEKNAGKLRKNKSDLIK 146

Query: 178  FESEK---KPMHKRKTKSALDKRXXXXXXXXXXXXXXKNQSETPGTRSDSYNCNELGVCI 348
               +      +  RK KS LD                       G      NC + GVC+
Sbjct: 147  NVGDGDAGNAIQPRKGKSELD-HVLDESRNDGLAGGSARVVILNGKNDCDENCKDFGVCL 205

Query: 349  EKLNSSTLRTEEQIEIEGVVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSFDVKEVD 528
            EK+ SS       I+   V V                               SFDVKE+ 
Sbjct: 206  EKVISSNSGNVGMIKCSPVHVDDDDEDDVVEEEVDDEEIDIEMEKG------SFDVKEIS 259

Query: 529  IQQVEHKKVVNEENNKVDLIRVEKPLLIFSNVIRPSPQVSYYARINPESTK--------A 684
            + +    KVVNE   K  +    K  ++  N   P   VS   + + ++ +        +
Sbjct: 260  VPE---SKVVNETERKEVVNVAAKQKIV--NEPEPKKVVSTNRQFHQKNERPVLIGLYYS 314

Query: 685  PPVWDEFERLQETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFSLISAV 864
             P  +E+    ++Q+KLQ++VDL+MW+D+ +SAF+              KD+N SLIS +
Sbjct: 315  VPKAEEYCSFPQSQNKLQSLVDLIMWRDISRSAFIFGIGTFAIVLSSYAKDINLSLISVM 374

Query: 865  SYVGLFYLAATFFYKSILCRGSIDVDEESNQRYLVGEEEAIWLLHLILPYFNXXXXXXXX 1044
            SY+GL YLA  F Y+S++CRG IDV++ +   Y++ EEEAIW+L LILPY N        
Sbjct: 375  SYIGLVYLAVIFLYRSLICRGVIDVEDTN---YVLREEEAIWVLKLILPYLNEFLSKLRA 431

Query: 1045 XXSGDPATTLKLAVTLFILARCGGSITVWKMAKLGFFAVFTVPKVCSSYSTQLTAYGYFW 1224
              SGDP TT+KLAV LF+LARCG  IT+WKMAK GFF VFTVPK+CSSYS QLTA+  FW
Sbjct: 432  MFSGDPGTTIKLAVLLFVLARCGSYITIWKMAKFGFFGVFTVPKICSSYSAQLTAFANFW 491

Query: 1225 IRRFCDAWNSCKHKKAVAAAIFTLVWNLSSVSARVWAAFMLVVAIRYYQQ 1374
            IRRF DAW+SC HKKAVA  IF LVWNLSSV AR+W+ F+L VA RYYQQ
Sbjct: 492  IRRFRDAWDSCSHKKAVALGIFGLVWNLSSVVARIWSVFVLFVAFRYYQQ 541


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