BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012263
         (2062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2...   935   0.0  
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2...   920   0.0  
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro...   918   0.0  
ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding pro...   917   0.0  
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   917   0.0  

>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  935 bits (2416), Expect = 0.0
 Identities = 495/583 (84%), Positives = 535/583 (91%), Gaps = 2/583 (0%)
 Frame = -3

Query: 1949 MASANAISTASIFQTPKQGSLSGRIDQ--GQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 1776
            MA++NA+STASI  +PKQG L  R +Q    R+NYG S  +F VRA+AK IAFDQ SR A
Sbjct: 1    MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA 60

Query: 1775 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 1596
            +QSGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61   LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120

Query: 1595 VASKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 1416
            VASKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVSIK+GIDKTVQGLV +LE+KAR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR 180

Query: 1415 PLKGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEID 1236
            P+KG DDI+A+ASISAGNDE+IGTMIADAIDKVGPDGVLSIESS+SFET VEVEEGMEID
Sbjct: 181  PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGMEID 240

Query: 1235 RGYISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSG 1056
            RGYISPQFVTNPEKLI EFE+ARVL+TDQKI+AIKDIIPLLEKT+QLRAPLLIIAEDV+G
Sbjct: 241  RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300

Query: 1055 EALATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 876
            EALATLVVNKLRG+LNV AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IE T IEQ
Sbjct: 301  EALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360

Query: 875  LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 696
            LG+ARKVT++KDSTTIIADAASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAKLSGGV
Sbjct: 361  LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420

Query: 695  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 516
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS CVPAIKDK+EDA
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA 480

Query: 515  DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXKASAWEVGYNAMTDTYENLMASGVI 336
            DERLGADIVQKALVSPASLIAQNA           KAS WE+GYNAMTD YENLM +GVI
Sbjct: 481  DERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVI 540

Query: 335  DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSG 207
            DPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK K+  AA + G
Sbjct: 541  DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAAAATQG 583


>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
            predicted protein [Populus trichocarpa]
          Length = 586

 Score =  920 bits (2378), Expect = 0.0
 Identities = 490/586 (83%), Positives = 533/586 (90%), Gaps = 2/586 (0%)
 Frame = -3

Query: 1949 MASANAISTASIFQTPKQGSL--SGRIDQGQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 1776
            MA++NA+STASI  +PKQG L   G      R+N+G S  +F VRA+AK IAFDQDSR A
Sbjct: 1    MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA 60

Query: 1775 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 1596
            +QSGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61   LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120

Query: 1595 VASKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 1416
            VASKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVSIKKGIDKTVQGLV +LE++AR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR 180

Query: 1415 PLKGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEID 1236
            P+KG DDI+A+A+ISAGNDE+IGTMIADAIDKVGPDGVLSIESS+SFETTVEVEEGMEID
Sbjct: 181  PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240

Query: 1235 RGYISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSG 1056
            RGYISPQFVTNPEKLI  FE+ARVLVTDQKISAIKDIIPLLEKT+QLR+PLLIIAEDV+G
Sbjct: 241  RGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300

Query: 1055 EALATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 876
            EALATLVVNKLRGILNV AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IE T IEQ
Sbjct: 301  EALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360

Query: 875  LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 696
            LG+ARKVT++KDSTTIIADAASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAKLSGGV
Sbjct: 361  LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420

Query: 695  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 516
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS  VPAIK+K++DA
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIKDA 480

Query: 515  DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXKASAWEVGYNAMTDTYENLMASGVI 336
            DERLGADIVQKALV+PASLIAQNA           K S WE+GYNAMTD YENL+ +GVI
Sbjct: 481  DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYENLVEAGVI 540

Query: 335  DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 198
            DPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK ++  AA   GL V
Sbjct: 541  DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRTPAAASPQGLTV 586


>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Glycine max]
          Length = 584

 Score =  918 bits (2372), Expect = 0.0
 Identities = 480/584 (82%), Positives = 533/584 (91%)
 Frame = -3

Query: 1949 MASANAISTASIFQTPKQGSLSGRIDQGQRVNYGSSGSKFDVRASAKKIAFDQDSRTAIQ 1770
            MAS NA+S+ASI ++P + SL+ R +   RVNY    ++F V+ASAK+IAFDQ SR+A+Q
Sbjct: 1    MASTNALSSASILRSPNRQSLTRRANHNGRVNYRKPNNRFSVKASAKEIAFDQHSRSAMQ 60

Query: 1769 SGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIREVA 1590
            +GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIREVA
Sbjct: 61   AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120

Query: 1589 SKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKARPL 1410
            SKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVS+K+GIDKTVQGLV +LE+KARP+
Sbjct: 121  SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180

Query: 1409 KGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEIDRG 1230
            KG DDI+A+ASISAGNDE+IG MIA+AIDKVGPDGVLSIESS+SFETTVEVEEGMEIDRG
Sbjct: 181  KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240

Query: 1229 YISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSGEA 1050
            YISPQFVTNPEKLIVEFE+ARVL+TDQKISAIKDIIPLLEKT+QLRAPLLIIAEDV+GEA
Sbjct: 241  YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300

Query: 1049 LATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQLG 870
            LATLVVNKLRGILNV AIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+E T +EQLG
Sbjct: 301  LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360

Query: 869  VARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAV 690
            +ARK+T++KDSTT+IADAA+KDE+QAR+AQ+KKEL++TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361  LARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420

Query: 689  IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDADE 510
            IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS  VPAIKDKLEDADE
Sbjct: 421  IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAIKDKLEDADE 480

Query: 509  RLGADIVQKALVSPASLIAQNAXXXXXXXXXXXKASAWEVGYNAMTDTYENLMASGVIDP 330
            RLGADIVQKAL++PA+LIAQNA           K+  WEVGYNAM D YENL+ +GVIDP
Sbjct: 481  RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYENLVEAGVIDP 540

Query: 329  AKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 198
            AKVTRCALQNAASVAGMVLTTQAIVVEKPK K+  A    GL V
Sbjct: 541  AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


>ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like isoform 1 [Glycine max]
          Length = 584

 Score =  917 bits (2371), Expect = 0.0
 Identities = 480/584 (82%), Positives = 533/584 (91%)
 Frame = -3

Query: 1949 MASANAISTASIFQTPKQGSLSGRIDQGQRVNYGSSGSKFDVRASAKKIAFDQDSRTAIQ 1770
            MAS NA+S+ASI ++P + SL+ R +   RVNY    S+F V+ASAK+IAFDQ SR+A+Q
Sbjct: 1    MASTNALSSASILRSPNRQSLTRRANHNGRVNYRQPNSRFSVKASAKEIAFDQHSRSAMQ 60

Query: 1769 SGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIREVA 1590
            +GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIREVA
Sbjct: 61   AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120

Query: 1589 SKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKARPL 1410
            SKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVS+K+GIDKTVQGLV +LE+KARP+
Sbjct: 121  SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180

Query: 1409 KGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEIDRG 1230
            KG DDI+A+ASISAGNDE+IG MIA+AIDKVGPDGVLSIESS+SFETTVEVEEGMEIDRG
Sbjct: 181  KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240

Query: 1229 YISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSGEA 1050
            YISPQFVTNPEKLIVEFE+ARVL+TDQKISAIKDIIPLLEKT+QLRAPLLIIAEDV+GEA
Sbjct: 241  YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300

Query: 1049 LATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQLG 870
            LATLVVNKLRGILNV AIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+E T +EQLG
Sbjct: 301  LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360

Query: 869  VARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAV 690
            +ARK+T++KDSTTIIADAA+KDE+QAR+AQ+KKEL++TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361  LARKITISKDSTTIIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420

Query: 689  IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDADE 510
            IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS  VPA+KDKL+DADE
Sbjct: 421  IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPALKDKLDDADE 480

Query: 509  RLGADIVQKALVSPASLIAQNAXXXXXXXXXXXKASAWEVGYNAMTDTYENLMASGVIDP 330
            RLGADIVQKAL++PA+LIAQNA           K+  WEVGYNAM D YENL+ +GVIDP
Sbjct: 481  RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMVDRYENLVEAGVIDP 540

Query: 329  AKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 198
            AKVTRCALQNAASVAGMVLTTQAIVVEKPK K+  A    GL V
Sbjct: 541  AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  917 bits (2369), Expect = 0.0
 Identities = 489/586 (83%), Positives = 531/586 (90%), Gaps = 2/586 (0%)
 Frame = -3

Query: 1949 MASANAISTASIFQTPKQGSLSGRIDQ--GQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 1776
            MASANAISTASI ++PKQ S   R++Q  G + NY  S ++F VRASAK+IAFDQ SR A
Sbjct: 1    MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60

Query: 1775 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 1596
            +Q+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIELADAMENAGAALIRE
Sbjct: 61   LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120

Query: 1595 VASKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 1416
            VASKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVSIKKGIDKTV  LV +LE+KAR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180

Query: 1415 PLKGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEID 1236
            P++G DDI+A+ASISAGNDE IG+MIADAI+KVGPDGVLSIESS+SFETTV+VEEGMEID
Sbjct: 181  PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240

Query: 1235 RGYISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSG 1056
            RGYISPQFVTNPEKLI EFE+ARVLVTDQKI+ IKDIIPLLEKT+QLR+PLLI+AEDV+G
Sbjct: 241  RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300

Query: 1055 EALATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 876
            EALATLVVNKLRGILNV AIKAPGFGERRKALLQDIAI+TGAEFQA+DLGLLIE T +EQ
Sbjct: 301  EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360

Query: 875  LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 696
            LG+ARKVT+TKDSTTIIADAASKDE+QARIAQIKKELAETDSVYD+EKLAERIAKLSGGV
Sbjct: 361  LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420

Query: 695  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 516
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS  VPAIKDKLEDA
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480

Query: 515  DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXKASAWEVGYNAMTDTYENLMASGVI 336
            DERLGADIVQKALV+PASLIA NA           KA  W VGYNAMTD YENL+ +GVI
Sbjct: 481  DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVI 540

Query: 335  DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 198
            DPAKV RCALQNAASVAGMVLTTQAIVVEK K K+  AA   GL +
Sbjct: 541  DPAKVARCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 586