BLASTX nr result

ID: Coptis25_contig00012262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012262
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis ...   468   e-129
emb|CBI17322.3| unnamed protein product [Vitis vinifera]              432   e-118
emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]   424   e-116
ref|XP_002518108.1| DNA binding protein, putative [Ricinus commu...   418   e-114
ref|XP_003516270.1| PREDICTED: uncharacterized protein LOC100813...   394   e-107

>ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis vinifera]
          Length = 400

 Score =  468 bits (1203), Expect = e-129
 Identities = 261/400 (65%), Positives = 298/400 (74%), Gaps = 3/400 (0%)
 Frame = -1

Query: 1311 LPGSYGGLDYSLDHHPHS-QLMKPRISENPSENNVEMVDYMFNNPPHQQISTSFGGSNSL 1135
            LP S+ GLDY+L+      QLMKPRI E+  +NN  +VDYM +NP HQQ+++S   S+S 
Sbjct: 14   LPASFTGLDYTLNQQQQQEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQLTSSGFCSSSF 73

Query: 1134 DKLNFAEVMQFADFGPKLALNQTKINTEENGIDPVYFLKFPVLNDKLQDQN-LMNPSVTG 958
            DKL+FA+VMQFADFGPKLALNQTK++ EE GIDPVYFLKFPVLNDKLQD + LM P    
Sbjct: 74   DKLSFADVMQFADFGPKLALNQTKVSEEETGIDPVYFLKFPVLNDKLQDHDSLMVPQPVV 133

Query: 957  NNENVFDGVSVGRNVTTIVDXXXXEARVSENNSIPLGFLGASLLKNPGSEVKNRRKRPRS 778
              E  +D          IV+         EN S+ L FLG +L KN   + KN+RKRPR+
Sbjct: 134  GGEERYDDAR-------IVEEIGEGEDEEENTSVQLQFLGENLQKNTVMDAKNKRKRPRT 186

Query: 777  VKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRALMPGSYVQRGDQASIIGGAIEFVRXX 598
            +KTSEEVESQRMTHIAVERNRRKQMNEHLRVLR+LMP SYVQRGDQASIIGGAIEFVR  
Sbjct: 187  IKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPSSYVQRGDQASIIGGAIEFVREL 246

Query: 597  XXXXXXXXXQKRRRLYGSGEAPRHMGDSTSLXXXXXXXXXXXXXXXP-SDQIKLGDYDDT 421
                     QKRRRL+G  +APR MGDS+SL                 +DQI  G    T
Sbjct: 247  EQLLQCLESQKRRRLFG--DAPRQMGDSSSLAIQQPQQPPFFPPLPLPNDQINFG----T 300

Query: 420  GLLEETAENKTCLADVEVKVLGFDALIKILSRRRPGQLIKTIAALEDLQFNILHTNITTI 241
            GL EETAENK+CLADVEV++LGFDA+IKILSRRRPGQLIKTIAALEDLQ NILHTNITTI
Sbjct: 301  GLREETAENKSCLADVEVRLLGFDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTI 360

Query: 240  EQTVLYSFNVKVGNESRFTAEDIASSVQQIFSFIHASSTI 121
            EQTVLYSFNVK+ +ESRFTAEDIASSVQQI SFIHA+S+I
Sbjct: 361  EQTVLYSFNVKIASESRFTAEDIASSVQQILSFIHANSSI 400


>emb|CBI17322.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  432 bits (1111), Expect = e-118
 Identities = 246/408 (60%), Positives = 285/408 (69%), Gaps = 2/408 (0%)
 Frame = -1

Query: 1338 EAEVNYATDLPGSYGGLDYSLDHHPHS-QLMKPRISENPSENNVEMVDYMFNNPPHQQIS 1162
            + E NY+  LP S+ GLDY+L+      QLMKPRI E+  +NN  +VDYM +NP HQQ++
Sbjct: 2    DKEENYSAALPASFTGLDYTLNQQQQQEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQLT 61

Query: 1161 TSFGGSNSLDKLNFAEVMQFADFGPKLALNQTKINTEENGIDPVYFLKFPVLNDKLQDQN 982
            +S   S+S DKL+FA+VMQFADFGPKLALNQTK++ EE GIDP Y            D  
Sbjct: 62   SSGFCSSSFDKLSFADVMQFADFGPKLALNQTKVSEEETGIDPRY-----------DDAR 110

Query: 981  LMNPSVTGNNENVFDGVSVGRNVTTIVDXXXXEARVSENNSIPLGFLGASLLKNPGSEVK 802
            ++     G +E                          EN S+ L FLG +L KN   + K
Sbjct: 111  IVEEIGEGEDEE-------------------------ENTSVQLQFLGENLQKNTVMDAK 145

Query: 801  NRRKRPRSVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRALMPGSYVQRGDQASIIGG 622
            N+RKRPR++KTSEEVESQRMTHIAVERNRRKQMNEHLRVLR+LMP SYVQRGDQASIIGG
Sbjct: 146  NKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPSSYVQRGDQASIIGG 205

Query: 621  AIEFVRXXXXXXXXXXXQKRRRLYGSGEAPRHMGDSTSLXXXXXXXXXXXXXXXP-SDQI 445
            AIEFVR           QKRRRL+G  +APR MGDS+SL                 +DQI
Sbjct: 206  AIEFVRELEQLLQCLESQKRRRLFG--DAPRQMGDSSSLAIQQPQQPPFFPPLPLPNDQI 263

Query: 444  KLGDYDDTGLLEETAENKTCLADVEVKVLGFDALIKILSRRRPGQLIKTIAALEDLQFNI 265
              G    TGL EETAENK+CLADVEV++LGFDA+IKILSRRRPGQLIKTIAALEDLQ NI
Sbjct: 264  NFG----TGLREETAENKSCLADVEVRLLGFDAMIKILSRRRPGQLIKTIAALEDLQLNI 319

Query: 264  LHTNITTIEQTVLYSFNVKVGNESRFTAEDIASSVQQIFSFIHASSTI 121
            LHTNITTIEQTVLYSFNVK+ +ESRFTAEDIASSVQQI SFIHA+S+I
Sbjct: 320  LHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQILSFIHANSSI 367


>emb|CAN60177.1| hypothetical protein VITISV_027832 [Vitis vinifera]
          Length = 422

 Score =  424 bits (1089), Expect = e-116
 Identities = 239/371 (64%), Positives = 272/371 (73%), Gaps = 3/371 (0%)
 Frame = -1

Query: 1311 LPGSYGGLDYSLDHHPHS-QLMKPRISENPSENNVEMVDYMFNNPPHQQISTSFGGSNSL 1135
            LP S+ GLDY+L+      QLMKPRI E+  +NN  +VDYM +NP HQQ+++S   S+S 
Sbjct: 14   LPASFTGLDYTLNQQQQQEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQLTSSGFCSSSF 73

Query: 1134 DKLNFAEVMQFADFGPKLALNQTKINTEENGIDPVYFLKFPVLNDKLQDQN-LMNPSVTG 958
            DKL+FA+VMQFADFGPKLALNQTK++ EE GIDPVYFLKFPVLNDKLQD + LM P    
Sbjct: 74   DKLSFADVMQFADFGPKLALNQTKVSEEETGIDPVYFLKFPVLNDKLQDHDSLMVPQPVV 133

Query: 957  NNENVFDGVSVGRNVTTIVDXXXXEARVSENNSIPLGFLGASLLKNPGSEVKNRRKRPRS 778
              E  +D          IV+         EN S+ L FLG +L KN   + KN+RKRPR+
Sbjct: 134  GGEERYDDAR-------IVEEIGEGEDEEENTSVQLQFLGENLQKNTVMDAKNKRKRPRT 186

Query: 777  VKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRALMPGSYVQRGDQASIIGGAIEFVRXX 598
            +KTSEEVESQRMTHIAVERNRRKQMNEHLRVLR+LMP SYVQRGDQASIIGGAIEFVR  
Sbjct: 187  IKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPSSYVQRGDQASIIGGAIEFVREL 246

Query: 597  XXXXXXXXXQKRRRLYGSGEAPRHMGDSTSL-XXXXXXXXXXXXXXXPSDQIKLGDYDDT 421
                     QKRRRL+  G+APR MGDS+SL                P+DQI  G    T
Sbjct: 247  EQLLQCLESQKRRRLF--GDAPRQMGDSSSLAIQQPQQPPFFPPLPLPNDQINFG----T 300

Query: 420  GLLEETAENKTCLADVEVKVLGFDALIKILSRRRPGQLIKTIAALEDLQFNILHTNITTI 241
            GL EETAENK+CLADVEV++LGFDA+IKILSRRRPGQLIKTIAALEDLQ NILHTNITTI
Sbjct: 301  GLREETAENKSCLADVEVRLLGFDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTI 360

Query: 240  EQTVLYSFNVK 208
            EQTVLYSFNVK
Sbjct: 361  EQTVLYSFNVK 371


>ref|XP_002518108.1| DNA binding protein, putative [Ricinus communis]
            gi|223542704|gb|EEF44241.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 411

 Score =  418 bits (1075), Expect = e-114
 Identities = 244/394 (61%), Positives = 281/394 (71%), Gaps = 12/394 (3%)
 Frame = -1

Query: 1311 LPGSYGGLDYSLDHHPHS--------QLMKPRISENPSENNVEMVDYMFNNPPHQQISTS 1156
            L  ++  LDYSLDHH H         +L+KPRI E   ++N  M+DYM NNP  Q IS+S
Sbjct: 10   LQATFTSLDYSLDHHHHHHHHQPQQHELIKPRIGETSGDSNSGMIDYMLNNPHQQLISSS 69

Query: 1155 -FGGSNSLDKLNFAEVMQFADFGPKLALNQTKINTEENGIDPVYFLKFPVLNDKLQDQNL 979
             F  SNSLDKL+FA+VMQFADFGPKLALNQTKI+ EE GIDPVYFLKFPVLNDK + Q+L
Sbjct: 70   GFCTSNSLDKLSFADVMQFADFGPKLALNQTKISEEETGIDPVYFLKFPVLNDKREGQSL 129

Query: 978  MNPSVTGNNENV-FDGVSVGRNVTTIVDXXXXEARVSENNSIPLGFLGA--SLLKNPGSE 808
            M P +   NE   F G+    +V         E RVS+N S+ L FL    +  KNP  E
Sbjct: 130  MIPQLGEENEEERFKGMG---SVERFTGREEEETRVSDNASVQLQFLENQDAQNKNPIPE 186

Query: 807  VKNRRKRPRSVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRALMPGSYVQRGDQASII 628
            VKN+RKRPR+ KTSEEVESQRMTHIAVERNRRKQMNEHLRVLR+LMPGSYVQRGDQASII
Sbjct: 187  VKNKRKRPRTTKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASII 246

Query: 627  GGAIEFVRXXXXXXXXXXXQKRRRLYGSGEAPRHMGDSTSLXXXXXXXXXXXXXXXPSDQ 448
            GGAIEFVR           QKRRRLYG   + +  G+S+                 P+DQ
Sbjct: 247  GGAIEFVRELEQLLQCLESQKRRRLYGDAASRQMAGESS----VAVQQPQSPFFPLPNDQ 302

Query: 447  IKLGDYDDTGLLEETAENKTCLADVEVKVLGFDALIKILSRRRPGQLIKTIAALEDLQFN 268
            +KL  + +TGL EETAENK+CLADVEVK+LGFDA+IKILSRRRPGQLIKTIAALEDLQ N
Sbjct: 303  MKLVQF-ETGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLN 361

Query: 267  ILHTNITTIEQTVLYSFNVKVGNESRFTAEDIAS 166
            ILHTNITTIEQTVLYSFNVK  +    + E I++
Sbjct: 362  ILHTNITTIEQTVLYSFNVKYNHVKVNSQEPIST 395


>ref|XP_003516270.1| PREDICTED: uncharacterized protein LOC100813515 [Glycine max]
          Length = 811

 Score =  394 bits (1012), Expect = e-107
 Identities = 244/421 (57%), Positives = 288/421 (68%), Gaps = 24/421 (5%)
 Frame = -1

Query: 1311 LPGSYGGLDYSLDHH------PHSQLMKPRISENPSENNVEMVDYM-FNNPPHQQISTSF 1153
            +P  +  LDYSLD H       H Q +          NN  MVDYM    PPH     + 
Sbjct: 396  MPPIFNTLDYSLDQHHLYAPNQHQQHLMKFQGSGDENNNGSMVDYMPQTTPPHGFYGATS 455

Query: 1152 GGSNSLDKLNFAEVMQFADFGPKLALNQTKINTEENGIDPVYFLKFPVLNDKLQD--QNL 979
              + S DKL+FA+VMQFADFGPKLALNQ K N EE+ IDPVYFLKFPVLN+K+++  QN+
Sbjct: 456  AATTSYDKLSFADVMQFADFGPKLALNQAK-NCEESAIDPVYFLKFPVLNNKMEEDQQNM 514

Query: 978  M--NPSVTGN-------NENVFDGVSVGRNVTTIVDXXXXEARVSE-NNSIPLGFLGASL 829
            M  N    G+       +E   + VSV      +V       RVS+ NNS+ + FLG   
Sbjct: 515  MMNNDDPDGDEAENHHHDERFNNLVSVEDKEGMMVREDEETTRVSDDNNSVQIRFLGHEE 574

Query: 828  LKNPGS----EVKN-RRKRPRSVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRALMPG 664
             +   +    E KN +RKRPR+VKTSEEVESQRMTHIAVERNRRKQMNEHLRVLR+LMPG
Sbjct: 575  PQQKNNCAVQENKNGKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPG 634

Query: 663  SYVQRGDQASIIGGAIEFVRXXXXXXXXXXXQKRRRLYGSGEAPRHMGDSTSLXXXXXXX 484
            SYVQRGDQASIIGGAIEFVR           QKRRRL G  +A R +GD +         
Sbjct: 635  SYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQA-RQVGDPS--LATQQQP 691

Query: 483  XXXXXXXXPSDQIKLGDYDDTGLLEETAENKTCLADVEVKVLGFDALIKILSRRRPGQLI 304
                    P++Q+KL + + TGL EETAE+K+CLADVEVK+LGFDA+IKILSRRRPGQLI
Sbjct: 692  PFFPPLPIPNEQMKLVEME-TGLHEETAESKSCLADVEVKLLGFDAMIKILSRRRPGQLI 750

Query: 303  KTIAALEDLQFNILHTNITTIEQTVLYSFNVKVGNESRFTAEDIASSVQQIFSFIHASST 124
            KTIAALEDLQ  ILHTNITTIEQTVLYSFNVKV ++SRFTAEDIASSVQQIF+FIHA+++
Sbjct: 751  KTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAEDIASSVQQIFNFIHANTS 810

Query: 123  I 121
            +
Sbjct: 811  M 811


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