BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012249
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ...   295   9e-78
sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom...   292   6e-77
gb|AFW66487.1| putative translation elongation factor family pro...   290   2e-76
dbj|BAD28023.1| putative LepA protein [Oryza sativa Japonica Gro...   287   1e-75
sp|B9F2U5.1|GUFP_ORYSJ RecName: Full=Translation factor GUF1 hom...   287   1e-75

>ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis
           vinifera] gi|296082645|emb|CBI21650.3| unnamed protein
           product [Vitis vinifera]
          Length = 680

 Score =  295 bits (754), Expect = 9e-78
 Identities = 165/240 (68%), Positives = 178/240 (74%), Gaps = 2/240 (0%)
 Frame = -2

Query: 714 MARGISGITIPQLISVNTHHRNCCINSLSCFATNLTTXXXXXXXSLYNDKWKGRRYENIV 535
           MA  I+ +     +  + HH N      S F+ +L+T                RR     
Sbjct: 1   MAAKINSLAALVSLQASHHHHNSTPFYFSPFSPHLSTTLTSR-----------RRSLRSA 49

Query: 534 CKAASVVGAEETTQSKDDI--IVGQSRLLKVPISNIRNFSIIAHIDHGKSTLADKLLQVT 361
             A S  G +    S  D+  + GQ RLLKVPISNIRNF IIAHIDHGKSTLADKLLQ+T
Sbjct: 50  VVAQSTAGTQSKAPSDVDLAAVSGQDRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMT 109

Query: 360 GTVEKREMKEQFLDNMDLERERGITIKLQAARMRYVNEKQPYCLNLIDTPGHVDFSYEVS 181
           GTV+KREMKEQFLDNMDLERERGITIKLQAARMRYV E +PYCLNLIDTPGHVDFSYEVS
Sbjct: 110 GTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVS 169

Query: 180 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIIVLNKIDLPGAEPDRVSQEIEE 1
           RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEII VLNKIDLPGAEP RVSQEIEE
Sbjct: 170 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPVRVSQEIEE 229


>sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|147841933|emb|CAN60938.1| hypothetical protein
           VITISV_013255 [Vitis vinifera]
          Length = 680

 Score =  292 bits (747), Expect = 6e-77
 Identities = 164/240 (68%), Positives = 177/240 (73%), Gaps = 2/240 (0%)
 Frame = -2

Query: 714 MARGISGITIPQLISVNTHHRNCCINSLSCFATNLTTXXXXXXXSLYNDKWKGRRYENIV 535
           MA  I+ +     +  + HH        S F+ +L+T                RR     
Sbjct: 1   MAAKINSLAALVSLQASHHHHXSTPFYFSPFSPHLSTTLTSR-----------RRSLRSA 49

Query: 534 CKAASVVGAEETTQSKDDI--IVGQSRLLKVPISNIRNFSIIAHIDHGKSTLADKLLQVT 361
             A S  G +    S  D+  + GQ RLLKVPISNIRNF IIAHIDHGKSTLADKLLQ+T
Sbjct: 50  VVAQSTAGTQSKAPSDVDLAAVSGQDRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMT 109

Query: 360 GTVEKREMKEQFLDNMDLERERGITIKLQAARMRYVNEKQPYCLNLIDTPGHVDFSYEVS 181
           GTV+KREMKEQFLDNMDLERERGITIKLQAARMRYV E +PYCLNLIDTPGHVDFSYEVS
Sbjct: 110 GTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVS 169

Query: 180 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIIVLNKIDLPGAEPDRVSQEIEE 1
           RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEII VLNKIDLPGAEP RVSQEIEE
Sbjct: 170 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPVRVSQEIEE 229


>gb|AFW66487.1| putative translation elongation factor family protein [Zea mays]
          Length = 672

 Score =  290 bits (742), Expect = 2e-76
 Identities = 151/180 (83%), Positives = 159/180 (88%)
 Frame = -2

Query: 540 IVCKAASVVGAEETTQSKDDIIVGQSRLLKVPISNIRNFSIIAHIDHGKSTLADKLLQVT 361
           ++C AA    A  TT +      GQ RL KVPISNIRNF IIAHIDHGKSTLADKLL++T
Sbjct: 48  VLCLAAPAPAAASTTDA------GQDRLQKVPISNIRNFCIIAHIDHGKSTLADKLLELT 101

Query: 360 GTVEKREMKEQFLDNMDLERERGITIKLQAARMRYVNEKQPYCLNLIDTPGHVDFSYEVS 181
           GTV+KREMKEQFLDNMDLERERGITIKLQAARMRYV   +PYCLNLIDTPGHVDFSYEVS
Sbjct: 102 GTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVMNNEPYCLNLIDTPGHVDFSYEVS 161

Query: 180 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIIVLNKIDLPGAEPDRVSQEIEE 1
           RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEII VLNKIDLPGAEPDRV+QEIEE
Sbjct: 162 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVAQEIEE 221


>dbj|BAD28023.1| putative LepA protein [Oryza sativa Japonica Group]
           gi|50252173|dbj|BAD28168.1| putative LepA protein [Oryza
           sativa Japonica Group]
          Length = 680

 Score =  287 bits (735), Expect = 1e-75
 Identities = 148/180 (82%), Positives = 159/180 (88%)
 Frame = -2

Query: 540 IVCKAASVVGAEETTQSKDDIIVGQSRLLKVPISNIRNFSIIAHIDHGKSTLADKLLQVT 361
           +VC AA       TT +      GQ RL KVP+SNIRNFSIIAHIDHGKSTLADKLL++T
Sbjct: 48  VVCPAAPASSPASTTDA------GQDRLQKVPVSNIRNFSIIAHIDHGKSTLADKLLELT 101

Query: 360 GTVEKREMKEQFLDNMDLERERGITIKLQAARMRYVNEKQPYCLNLIDTPGHVDFSYEVS 181
           GTV+KREMK+QFLDNMDLERERGITIKLQAARMRY+   +PYCLNLIDTPGHVDFSYEVS
Sbjct: 102 GTVQKREMKQQFLDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVS 161

Query: 180 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIIVLNKIDLPGAEPDRVSQEIEE 1
           RSLAACEGALLVVDASQGVEAQTLANVYLALEN+LEII VLNKIDLPGAEPDRV+QEIEE
Sbjct: 162 RSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGAEPDRVAQEIEE 221


>sp|B9F2U5.1|GUFP_ORYSJ RecName: Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|222622207|gb|EEE56339.1| hypothetical protein
           OsJ_05443 [Oryza sativa Japonica Group]
          Length = 680

 Score =  287 bits (735), Expect = 1e-75
 Identities = 148/180 (82%), Positives = 159/180 (88%)
 Frame = -2

Query: 540 IVCKAASVVGAEETTQSKDDIIVGQSRLLKVPISNIRNFSIIAHIDHGKSTLADKLLQVT 361
           +VC AA       TT +      GQ RL KVP+SNIRNFSIIAHIDHGKSTLADKLL++T
Sbjct: 48  VVCPAAPASSPASTTDA------GQDRLQKVPVSNIRNFSIIAHIDHGKSTLADKLLELT 101

Query: 360 GTVEKREMKEQFLDNMDLERERGITIKLQAARMRYVNEKQPYCLNLIDTPGHVDFSYEVS 181
           GTV+KREMK+QFLDNMDLERERGITIKLQAARMRY+   +PYCLNLIDTPGHVDFSYEVS
Sbjct: 102 GTVQKREMKQQFLDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVS 161

Query: 180 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIIVLNKIDLPGAEPDRVSQEIEE 1
           RSLAACEGALLVVDASQGVEAQTLANVYLALEN+LEII VLNKIDLPGAEPDRV+QEIEE
Sbjct: 162 RSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGAEPDRVAQEIEE 221