BLASTX nr result

ID: Coptis25_contig00012241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012241
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...    77   2e-12
ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779...    75   8e-12
ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    74   2e-11
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...    73   4e-11
ref|XP_002890947.1| hypothetical protein ARALYDRAFT_473357 [Arab...    70   2e-10

>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
 Frame = +2

Query: 305 LMYFVIIF--FGLVAFSACIASEFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSA 478
           L++F+++    GLV+F+ CIASE KR+K  D++ +G  CHLP SPAF LG+ +   L+ +
Sbjct: 14  LIFFIVVSHSLGLVSFTLCIASETKRNKKGDLRWNGKLCHLPSSPAFGLGIASLVCLVLS 73

Query: 479 QIIGNTLIF---CSRGKNIIAWKQRIPF---SLMILSW 574
           QI+GN+++F   CS GK     K  IPF    L+++SW
Sbjct: 74  QIVGNSILFKTYCSGGKRNA--KCEIPFVARILLLISW 109


>ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779666 [Glycine max]
          Length = 191

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 8/98 (8%)
 Frame = +2

Query: 305 LMYFVIIF--FGLVAFSACIASEFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSA 478
           L++ ++I    GLV+F+ CIASE KR+K  D++ +G  CHLP SPAF LGV +   L+ +
Sbjct: 14  LIFCIVISHSLGLVSFTLCIASETKRNKKGDLRWNGKLCHLPSSPAFGLGVASLVCLVLS 73

Query: 479 QIIGNTLIF---CSRGKNIIAWKQRIPF---SLMILSW 574
           QI+GN+++F   CS GK     K  IPF    L+++SW
Sbjct: 74  QIVGNSILFRTYCSGGKRNA--KFEIPFVARILLLISW 109


>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
 Frame = +2

Query: 317 VIIFFGLVAFSACIASEFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQIIGNT 496
           +I F GL+AF  C+A+EFKRSK KD+KL+G  C+L  S AF LGV A   L  A I+GN 
Sbjct: 14  IIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVAALICLFIAHILGN- 72

Query: 497 LIFCSR---GKNIIAWKQRIPF---SLMILSW 574
           ++ C R   G+   + K + P+   +L+++SW
Sbjct: 73  MVICRRICSGEKSSSGKAKTPWITSTLLVVSW 104


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
 Frame = +2

Query: 305 LMYFVIIFFGLVAFSACIASEFKRSKAKDMKLDGMSCHLPISPAFVLGVFASTSLLSAQI 484
           L   + IF GLV+F+ CIASE  ++K  D++ +G  C+LP S A+ LG+ A   L  AQI
Sbjct: 13  LSIIISIFLGLVSFTLCIASEITKNKMDDLRWNGKLCYLPSSQAYGLGIAALVCLFLAQI 72

Query: 485 IGNTLIF---CSRGKNIIAWKQRIPF---SLMILSW 574
           IGN+++F   CSR K    +K  +PF    L+++SW
Sbjct: 73  IGNSMLFKNSCSRRKKNAQYK--LPFFARLLILISW 106


>ref|XP_002890947.1| hypothetical protein ARALYDRAFT_473357 [Arabidopsis lyrata subsp.
           lyrata] gi|297336789|gb|EFH67206.1| hypothetical protein
           ARALYDRAFT_473357 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
 Frame = +2

Query: 272 LQAQMKKRQHGLMYFVIIF-----FGLVAFSACIASEFKRSKAKDMKLDGMSCHLPISPA 436
           ++ Q +  ++GL  F I F     FGLVAF  C+++EF+++K KD+K DG SC+LP + A
Sbjct: 1   MEVQEQYNRNGLPKFSIFFMFIFLFGLVAFFLCLSAEFQKAKGKDLKWDGESCYLPENRA 60

Query: 437 FVLGVFASTSLLSAQIIGNTLIFCSRGKNIIAWKQRIPFSLMILSW 574
           F LG+ A   +  AQI+GN +I     K        +   L++ SW
Sbjct: 61  FGLGIAALACVSVAQIVGNVVICRGFLKTNKTGTTLLCIILLLFSW 106


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