BLASTX nr result

ID: Coptis25_contig00012234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012234
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycin...   293   3e-77
gb|ACJ85070.1| unknown [Medicago truncatula] gi|388501276|gb|AFK...   289   5e-76
ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago ...   287   3e-75
ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|2...   286   4e-75
gb|AFX67009.1| hypothetical protein [Solanum tuberosum]               278   1e-72

>ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycine max]
           gi|255631350|gb|ACU16042.1| unknown [Glycine max]
          Length = 207

 Score =  293 bits (751), Expect = 3e-77
 Identities = 135/208 (64%), Positives = 166/208 (79%)
 Frame = +1

Query: 202 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 381
           M+FL W RPS  +QK CI+K GTFNYD KY+ AT+KS +SL+ D  LSKDGF LN+ RVL
Sbjct: 1   MLFLSWGRPSPQDQKTCINKSGTFNYDDKYKGATAKSVASLKADEGLSKDGFLLNEARVL 60

Query: 382 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 561
           +GSG  T+   KSAL+SW+HFGL+W FVDPKT ++ G KFCVCVKEF PW+MMPLQV YV
Sbjct: 61  VGSGIETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVKFCVCVKEFFPWLMMPLQVVYV 120

Query: 562 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 741
           N+    + K   ASF FGSGTL GHLL+GEERFSIE+DENNQVWYE+LSFSKPA +LS++
Sbjct: 121 NE--TGTAKYRTASFGFGSGTLHGHLLAGEERFSIEIDENNQVWYEVLSFSKPASILSLV 178

Query: 742 GYPYIQHRQKYFAQQSADALVKYVTAQK 825
           GYPY+  RQKYFA +SA A++K++ + K
Sbjct: 179 GYPYVMLRQKYFANESAKAMLKHINSSK 206


>gb|ACJ85070.1| unknown [Medicago truncatula] gi|388501276|gb|AFK38704.1| unknown
           [Medicago truncatula]
          Length = 207

 Score =  289 bits (740), Expect = 5e-76
 Identities = 133/208 (63%), Positives = 163/208 (78%)
 Frame = +1

Query: 202 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 381
           MVFL W RP+  +QK CI+K GT NYD KY+ A++KS SSL+ D  L  DGF LN  RVL
Sbjct: 1   MVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSSLKEDKGLPNDGFLLNNARVL 60

Query: 382 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 561
           +GSG  T+   KSAL+SW+HFG++W FVDPKT +E G KFCVCVKEFLPW+MMPLQV YV
Sbjct: 61  VGSGVETFEKGKSALRSWRHFGMNWAFVDPKTPVEQGAKFCVCVKEFLPWLMMPLQVVYV 120

Query: 562 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 741
           N+    + K   ASF FGSGTLQGHLL+GEERFS+E+DENNQVWYEILSFSKPAH+LS +
Sbjct: 121 NE--TSTTKNRGASFGFGSGTLQGHLLAGEERFSVEIDENNQVWYEILSFSKPAHVLSFV 178

Query: 742 GYPYIQHRQKYFAQQSADALVKYVTAQK 825
           GYP++  RQKYFA +SA  ++K++ + K
Sbjct: 179 GYPHVMLRQKYFAHESAKVMLKHINSSK 206


>ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago truncatula]
           gi|355523242|gb|AET03696.1| hypothetical protein
           MTR_8g074720 [Medicago truncatula]
          Length = 232

 Score =  287 bits (734), Expect = 3e-75
 Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%)
 Frame = +1

Query: 199 KMVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRV 378
           +MVFL W RP+  +QK CI+K GT NYD KY+ A++KS SSL+ D  L  DGF LN  RV
Sbjct: 23  RMVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSSLKEDKGLPNDGFLLNNARV 82

Query: 379 LLGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEY 558
           L+GSG  T+   KSAL+SW+HFG++W FVDPKT +E G KFCVCVKEFLPW+MMPLQV Y
Sbjct: 83  LVGSGVETFEKGKSALRSWRHFGMNWAFVDPKTPVEQGAKFCVCVKEFLPWLMMPLQVVY 142

Query: 559 VNDIKQDSKKKLNASFQFGSGTLQGHLL--SGEERFSIELDENNQVWYEILSFSKPAHLL 732
           VN+    + K   ASF FGSGTLQGHLL  +GEERFS+E+DENNQVWYEILSFSKPAH+L
Sbjct: 143 VNE--TSTTKNRGASFGFGSGTLQGHLLVAAGEERFSVEIDENNQVWYEILSFSKPAHVL 200

Query: 733 SIIGYPYIQHRQKYFAQQSADALVKYVTAQK 825
           S +GYPY+  RQKYFA +SA  ++K++ + K
Sbjct: 201 SFVGYPYVMLRQKYFAHESAKVMLKHINSSK 231


>ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|222836802|gb|EEE75195.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  286 bits (733), Expect = 4e-75
 Identities = 139/205 (67%), Positives = 162/205 (79%)
 Frame = +1

Query: 202 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 381
           MVFLCW +PS  EQK C++K   FNYDSKYR ATSK  SSL   N LSKDGF +N  RVL
Sbjct: 1   MVFLCWAKPSLQEQKDCLNKSDGFNYDSKYRGATSKHASSL---NELSKDGFLINHARVL 57

Query: 382 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 561
           +GSG  TY   K AL++W+HFG DW FVD KT I +G KFCVCVKEFLPW+MMPLQ+ YV
Sbjct: 58  VGSGVETYEKGKLALENWRHFGFDWGFVDSKTPIRSGVKFCVCVKEFLPWVMMPLQIVYV 117

Query: 562 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 741
           N+ +  S KK  ASF FG GTLQGHLL+GEERFSIE+DE NQVWYE+LSFSKPAH LS I
Sbjct: 118 NESR--SSKKDMASFCFGGGTLQGHLLAGEERFSIEMDEKNQVWYEVLSFSKPAHFLSFI 175

Query: 742 GYPYIQHRQKYFAQQSADALVKYVT 816
           GYPY+Q RQK+FA QS++A+VK+V+
Sbjct: 176 GYPYVQLRQKFFAHQSSNAVVKHVS 200


>gb|AFX67009.1| hypothetical protein [Solanum tuberosum]
          Length = 203

 Score =  278 bits (712), Expect = 1e-72
 Identities = 133/206 (64%), Positives = 160/206 (77%)
 Frame = +1

Query: 202 MVFLCWKRPSELEQKACIDKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 381
           MVFL W RPS  EQKACI+K G+FNYD+++R AT K    L+ D  L+KDGF +N  RVL
Sbjct: 1   MVFLSWTRPSPDEQKACINKSGSFNYDNRFRGATDKPAPLLKQDRELAKDGFSVNCARVL 60

Query: 382 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 561
           +GSG  T+   K+ALQ+W+HFGL+W FVDPK  I++GTKFCVCVKEF PW+MMPLQV YV
Sbjct: 61  VGSGRETFEKGKAALQNWRHFGLNWAFVDPKAPIQSGTKFCVCVKEFFPWLMMPLQVVYV 120

Query: 562 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 741
            + K     K+ ASF FGSGTLQGHLL+GEERFSI LDEN+ VWYEILSFSKPAHLLS+ 
Sbjct: 121 TENK---NSKMGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLF 177

Query: 742 GYPYIQHRQKYFAQQSADALVKYVTA 819
           GYPY+  RQKYFA  S  A+ K+++A
Sbjct: 178 GYPYVLLRQKYFAHHSGIAVKKHLSA 203


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