BLASTX nr result

ID: Coptis25_contig00012233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012233
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago ...    62   6e-08
ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycin...    60   1e-07
ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_004134836.1| PREDICTED: UPF0548 protein At2g17695-like [C...    57   1e-06
gb|AFX67009.1| hypothetical protein [Solanum tuberosum]                57   2e-06

>ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago truncatula]
           gi|355523242|gb|AET03696.1| hypothetical protein
           MTR_8g074720 [Medicago truncatula]
          Length = 232

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +2

Query: 71  HRQN-KLV*KMVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKS 208
           HRQN  ++ +MVFL W RP+  DQK CINK GT NYD KY+ A++KS
Sbjct: 14  HRQNYNIIVRMVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKS 60


>ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycine max]
           gi|255631350|gb|ACU16042.1| unknown [Glycine max]
          Length = 207

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +2

Query: 98  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKS 208
           M+FL W RPS  DQK CINK GTFNYD KY+ AT+KS
Sbjct: 1   MLFLSWGRPSPQDQKTCINKSGTFNYDDKYKGATAKS 37


>ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|222836802|gb|EEE75195.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = +2

Query: 98  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSK 205
           MVFLCW +PS  +QK C+NK   FNYDSKYR ATSK
Sbjct: 1   MVFLCWAKPSLQEQKDCLNKSDGFNYDSKYRGATSK 36


>ref|XP_004134836.1| PREDICTED: UPF0548 protein At2g17695-like [Cucumis sativus]
           gi|449491283|ref|XP_004158849.1| PREDICTED: UPF0548
           protein At2g17695-like [Cucumis sativus]
          Length = 208

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +2

Query: 98  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATS 202
           MVFLCW RPS  +QKACI + G+FNY+SK+R AT+
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATA 35


>gb|AFX67009.1| hypothetical protein [Solanum tuberosum]
          Length = 203

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 98  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSK 205
           MVFL W RPS  +QKACINK G+FNYD+++R AT K
Sbjct: 1   MVFLSWTRPSPDEQKACINKSGSFNYDNRFRGATDK 36


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