BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012221
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   441   e-121
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   439   e-121
ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago ...   404   e-110
ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arab...   404   e-110
ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat...   404   e-110

>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  441 bits (1134), Expect = e-121
 Identities = 212/279 (75%), Positives = 244/279 (87%)
 Frame = +3

Query: 3    SVLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLR 182
            SVLPACGDLSAL LG+RIHEYVVRK L  N+ L NAL+DMYAKCGCL+ AREVFD M  R
Sbjct: 1300 SVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 1359

Query: 183  DVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYF 362
            DVVSWTSMISAYGMNG+GRDAV+LFS M + G+ PD I FVS+LSACSH+GLLDEG++YF
Sbjct: 1360 DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYF 1419

Query: 363  RLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALLSACQVYSN 542
            +LMT E K+VPR+EH+ CMVDLLGRAG VDEAY FI QM ++P+E++WGALLSAC+VYSN
Sbjct: 1420 KLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 1479

Query: 543  MSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISKMPGCSNVE 722
            M +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW +VT VRS+MK++GI KMPG SN E
Sbjct: 1480 MIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFE 1539

Query: 723  MGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVP 839
            +  RVHTFL GDQSHPQ+K+IYEELDVLV KMKEAGYVP
Sbjct: 1540 LDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVP 1578



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 9/238 (3%)
 Frame = +3

Query: 6    VLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRD 185
            VL A      L +G +IH  VVR GL  N+F+ N L+ MY KCGCL  A  V D M  RD
Sbjct: 1132 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRD 1191

Query: 186  VVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL--LDEGKHY 359
            VVSW S+++    NGQ  DA+ +  +M   G+ PD     S+L A +++ L  +   K  
Sbjct: 1192 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEM 1251

Query: 360  FRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQM---TVKPSEQLWGALLSACQ 530
            F  +  +      L  +  M+ +     +  EA     QM    V P      ++L AC 
Sbjct: 1252 FMKLANK-----SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG 1306

Query: 531  VYSNMSLGLVAADHLFQLVPEQAGYYVLLSN----IYAKAGRWNEVTAVRSVMKSRGI 692
              S + LG    ++   +V ++    +LL N    +YAK G       V   MK R +
Sbjct: 1307 DLSALLLGRRIHEY---VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDV 1361


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/279 (75%), Positives = 243/279 (87%)
 Frame = +3

Query: 3    SVLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLR 182
            SVLPACGDLSAL LG+RIHEYVVRK L  N+ L NAL+DMYAKCGCL+ AREVFD M  R
Sbjct: 311  SVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 370

Query: 183  DVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYF 362
            DVVSWTSMISAYGMNG+GRDAV+LFS M + G+ PD I FVS+LSACSH+GLLDEG++YF
Sbjct: 371  DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYF 430

Query: 363  RLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALLSACQVYSN 542
            +LMT E K+VPR+EH+ CMVDLLGRAG VDEAY FI QM ++P+E++WGALLSAC+VYSN
Sbjct: 431  KLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 490

Query: 543  MSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISKMPGCSNVE 722
            M +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW +VT VRS+MK++GI KMPG SN E
Sbjct: 491  MIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFE 550

Query: 723  MGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVP 839
            +  RVHTFL GDQSHPQ+K+IYEELDV V KMKEAGYVP
Sbjct: 551  LDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVP 589



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 9/238 (3%)
 Frame = +3

Query: 6   VLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRD 185
           VL A      L +G +IH  VVR GL  N+F+ N L+ MY KCGCL  A  V D M  RD
Sbjct: 143 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRD 202

Query: 186 VVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGL--LDEGKHY 359
           VVSW S+++    NGQ  DA+ +  +M   G+ PD     S+L A +++ L  +   K  
Sbjct: 203 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEM 262

Query: 360 FRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQM---TVKPSEQLWGALLSACQ 530
           F  +  +      L  +  M+ +     +  EA     QM    V P      ++L AC 
Sbjct: 263 FMKLANK-----SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG 317

Query: 531 VYSNMSLGLVAADHLFQLVPEQAGYYVLLSN----IYAKAGRWNEVTAVRSVMKSRGI 692
             S + LG    ++   +V ++    +LL N    +YAK G       V   MK R +
Sbjct: 318 DLSALLLGRRIHEY---VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDV 372


>ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
            gi|355522693|gb|AET03147.1| hypothetical protein
            MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  404 bits (1039), Expect = e-110
 Identities = 192/279 (68%), Positives = 231/279 (82%)
 Frame = +3

Query: 3    SVLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLR 182
            SVLPACGDLSAL LG+RIHEYV +K L  N+ L N+L+DMYA+CGCL  A+ VFD M  R
Sbjct: 293  SVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR 352

Query: 183  DVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYF 362
            DV SWTS+ISAYGM GQG +AVALF++ML SG  PD I FV+ILSACSHSGLLDEG+ YF
Sbjct: 353  DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYF 412

Query: 363  RLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALLSACQVYSN 542
            + MT +Y++ PR+EHYAC+VDLLGRAG VDEAY  I QM ++P+E++W  LLS+C+V++N
Sbjct: 413  KQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTN 472

Query: 543  MSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISKMPGCSNVE 722
            M +G++AAD+L QL PEQ+GYYVLLSNIYAKAGRW EVT +RSVMK + I K PG SNVE
Sbjct: 473  MDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVE 532

Query: 723  MGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVP 839
            +  +VHTFL GD SHPQ+KEIYEEL VLV+KMKE GYVP
Sbjct: 533  LNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVP 571



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 12/242 (4%)
 Frame = +3

Query: 6   VLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRD 185
           VL AC     L  G  IH  V++ GL  N+F+ N L+ MY KCGCL  AR VFD M  +D
Sbjct: 125 VLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKD 184

Query: 186 VVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSA---CSHSGLLDEGKH 356
           VVSW SM++ Y  N +  DA+ +  +M + G  PD     S++ A    S   +L   K 
Sbjct: 185 VVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKI 244

Query: 357 YFRLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQM---TVKPSEQLWGALLSAC 527
           +  L  +       L  +  M+ +  +  L  +A     QM    V+P    + ++L AC
Sbjct: 245 FVNLERK------NLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPAC 298

Query: 528 QVYSNMSLGLVAADHL--FQLVPEQAGYYVLLSN----IYAKAGRWNEVTAVRSVMKSRG 689
              S + LG    +++   +L P      +LL N    +YA+ G  ++   V   MK R 
Sbjct: 299 GDLSALLLGRRIHEYVEKKKLCPN-----LLLENSLIDMYARCGCLDDAKRVFDRMKFRD 353

Query: 690 IS 695
           ++
Sbjct: 354 VA 355



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/101 (34%), Positives = 50/101 (49%)
 Frame = +3

Query: 48  KRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRDVVSWTSMISAYGMN 227
           K++H  +      QN  L   L+  YA CG     R+VFD M  R+VV +  MI +Y  N
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 228 GQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEG 350
            +  D + +F +M+  G  PD   +  +L ACS S  L  G
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138


>ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
            lyrata] gi|297323489|gb|EFH53910.1| hypothetical protein
            ARALYDRAFT_485272 [Arabidopsis lyrata subsp. lyrata]
          Length = 1217

 Score =  404 bits (1039), Expect = e-110
 Identities = 193/279 (69%), Positives = 232/279 (83%)
 Frame = +3

Query: 3    SVLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLR 182
            SVLPACGD SAL LGK+IH Y+ RK L  N+ L NAL+DMYAKCGCL  AR+VF+ M  R
Sbjct: 315  SVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSR 374

Query: 183  DVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYF 362
            DVVSWT+MISAYG +G+G DAVALFS M +SG+VPD I FV+ L+ACSH+GLL+EG+  F
Sbjct: 375  DVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 434

Query: 363  RLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALLSACQVYSN 542
            +LMT  YK+ PRLEH ACMVDLLGRAG V EAYKFI +M ++P+E++WGALL AC+V+SN
Sbjct: 435  KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSN 494

Query: 543  MSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISKMPGCSNVE 722
              +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW EVT +R++MKS+G+ K PG SNVE
Sbjct: 495  TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 554

Query: 723  MGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVP 839
            + + +HTFLVGD+SHPQ+ EIY ELDVLV KMKE GYVP
Sbjct: 555  VNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVP 593



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 6/235 (2%)
 Frame = +3

Query: 6   VLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRD 185
           VL AC     + +GK+IH    + GLS  +F+ N LV MY KCG L  AR V D M  RD
Sbjct: 147 VLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 206

Query: 186 VVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYFR 365
           VVSW S+++ Y  N +  DA+ +  +M    +  D     S+L A S++    E   Y +
Sbjct: 207 VVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVK 264

Query: 366 LMTREYKMVPR-LEHYACMVDLLGRAGLVDEAYKFISQMTV---KPSEQLWGALLSACQV 533
            M   +KM  + L  +  M+ +  +  +  EA +  S M     +P      ++L AC  
Sbjct: 265 DMF--FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGD 322

Query: 534 YSNMSLGLVAADHL--FQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGI 692
            S +SLG     ++   +L+P       L+ ++YAK G  +    V   MKSR +
Sbjct: 323 TSALSLGKKIHGYIERKKLIPNLLLENALI-DMYAKCGCLDRARDVFENMKSRDV 376



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 47/159 (29%), Positives = 73/159 (45%)
 Frame = +3

Query: 6   VLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRD 185
           VL    DL  L   + +H  ++ + L  N  L   L+  YA    +  AR+VFD +  R+
Sbjct: 49  VLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERN 105

Query: 186 VVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYFR 365
           V+    MI +Y  NG  R+ + +F  M    V PD   F  +L ACS SG +  GK    
Sbjct: 106 VIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHG 165

Query: 366 LMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMT 482
             T+   +   L     +V + G+ G + EA   + +M+
Sbjct: 166 SATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 203


>ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Glycine max]
          Length = 673

 Score =  404 bits (1038), Expect = e-110
 Identities = 195/279 (69%), Positives = 230/279 (82%)
 Frame = +3

Query: 3    SVLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLR 182
            SVL ACGDLSAL LG+RIHEYV RK L  NM L N+L+DMYA+CGCL+ A+ VFD M  R
Sbjct: 307  SVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR 366

Query: 183  DVVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYF 362
            DV SWTS+ISAYGM GQG +AVALF++M  SG  PD I FV+ILSACSHSGLL+EGK YF
Sbjct: 367  DVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYF 426

Query: 363  RLMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQMTVKPSEQLWGALLSACQVYSN 542
            + MT +YK+ P +EH+AC+VDLLGR+G VDEAY  I QM +KP+E++WGALLS+C+VYSN
Sbjct: 427  KQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSN 486

Query: 543  MSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGISKMPGCSNVE 722
            M +G++AAD L QL PE++GYYVLLSNIYAKAGRW EVTA+RS+MK R I KMPG SNVE
Sbjct: 487  MDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVE 546

Query: 723  MGKRVHTFLVGDQSHPQTKEIYEELDVLVSKMKEAGYVP 839
            +  +VHTFL GD  HPQ+KEIYEEL VLV KMKE GYVP
Sbjct: 547  LNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVP 585



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
 Frame = +3

Query: 6   VLPACGDLSALELGKRIHEYVVRKGLSQNMFLTNALVDMYAKCGCLQAAREVFDGMGLRD 185
           VL AC     L +G ++H  V + GL  N+F+ N L+ +Y KCGCL  AR V D M  +D
Sbjct: 139 VLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKD 198

Query: 186 VVSWTSMISAYGMNGQGRDAVALFSDMLESGVVPDQIVFVSILSACSHSGLLDEGKHYFR 365
           VVSW SM++ Y  N Q  DA+ +  +M      PD     S+L A +++    E   Y  
Sbjct: 199 VVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTS--SENVLYVE 256

Query: 366 LMTREYKMVPRLEHYACMVDLLGRAGLVDEAYKFISQM---TVKPSEQLWGALLSACQVY 536
            M    +    L  +  M+ +  +  +  ++     QM    V+P      ++L AC   
Sbjct: 257 EMFMNLEK-KSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDL 315

Query: 537 SNMSLGLVAADHL--FQLVPEQAGYYVLLSNIYAKAGRWNEVTAVRSVMKSRGIS 695
           S + LG    +++   +L P       L+ ++YA+ G   +   V   MK R ++
Sbjct: 316 SALLLGRRIHEYVERKKLCPNMLLENSLI-DMYARCGCLEDAKRVFDRMKFRDVA 369