BLASTX nr result

ID: Coptis25_contig00012216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012216
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17383.3| unnamed protein product [Vitis vinifera]              262   7e-68
ref|XP_002268446.1| PREDICTED: uncharacterized protein LOC100250...   262   7e-68
ref|XP_003544576.1| PREDICTED: uncharacterized protein LOC100797...   262   9e-68
ref|XP_002886139.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   257   3e-66
ref|XP_002530736.1| conserved hypothetical protein [Ricinus comm...   256   5e-66

>emb|CBI17383.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  262 bits (670), Expect = 7e-68
 Identities = 143/300 (47%), Positives = 186/300 (62%), Gaps = 44/300 (14%)
 Frame = +1

Query: 127 DPFILNYQPSELKIAAEFLTNWLPFLTKDLCRTCTHTLSNRIRSLDPDHVGE-------- 282
           D F+  YQ SEL+IA+EFLT WLPFL++DLC  C  TLS+RIRS+ P+  G+        
Sbjct: 47  DSFLRGYQRSELRIASEFLTTWLPFLSRDLCHHCAETLSDRIRSIGPEVHGDAENLPKDE 106

Query: 283 ----------------ETH-DDCDS-----------DTNLLGSWTESANGFSTSVPESSQ 378
                           ++H D+CDS           DTN +GS+ +  N +S  VPE+S 
Sbjct: 107 NVTVSTPDIMRLKKHIDSHCDNCDSNSLGSWKDNDADTNSVGSFKDEVNEWSEPVPEAST 166

Query: 379 T-----TTNVESPSARMLWGDIXXXXXXXXXXXXXXXXXKHFLRVEVDSANSE---RRVQ 534
           +     + ++E+PS R+ W D+                      ++ +S+  E    +V 
Sbjct: 167 SELASESPSIETPSPRISWADMAQEDELEEEEEHEANKRS----IDENSSTGEVGVSKVP 222

Query: 535 SKTTLSREKREYIRFRSVKRKKDFACFERINGKLVNILDGLELHTGVFSAAEQKRIVDLI 714
            K  L RE+REYIRFR+V+RKKDF C ER+ GK VNILDGLELH G+FSAAEQKRIVD I
Sbjct: 223 RKAELPREQREYIRFRNVQRKKDFICLERVKGKFVNILDGLELHVGIFSAAEQKRIVDFI 282

Query: 715 YSLEEKGRNRELRARTFSAPKKWMKGKGRMTIQFGCCYNYAVSKDGREPGILQDEHVDPI 894
           Y L+E GRN +L+ RT+SAP+KWM+GKGR+TIQFGCCYNYA  K+G  PGILQ+E VDPI
Sbjct: 283 YELQEMGRNGQLKERTYSAPQKWMRGKGRVTIQFGCCYNYATDKNGNPPGILQNEVVDPI 342


>ref|XP_002268446.1| PREDICTED: uncharacterized protein LOC100250563 [Vitis vinifera]
          Length = 510

 Score =  262 bits (670), Expect = 7e-68
 Identities = 143/300 (47%), Positives = 186/300 (62%), Gaps = 44/300 (14%)
 Frame = +1

Query: 127 DPFILNYQPSELKIAAEFLTNWLPFLTKDLCRTCTHTLSNRIRSLDPDHVGE-------- 282
           D F+  YQ SEL+IA+EFLT WLPFL++DLC  C  TLS+RIRS+ P+  G+        
Sbjct: 10  DSFLRGYQRSELRIASEFLTTWLPFLSRDLCHHCAETLSDRIRSIGPEVHGDAENLPKDE 69

Query: 283 ----------------ETH-DDCDS-----------DTNLLGSWTESANGFSTSVPESSQ 378
                           ++H D+CDS           DTN +GS+ +  N +S  VPE+S 
Sbjct: 70  NVTVSTPDIMRLKKHIDSHCDNCDSNSLGSWKDNDADTNSVGSFKDEVNEWSEPVPEAST 129

Query: 379 T-----TTNVESPSARMLWGDIXXXXXXXXXXXXXXXXXKHFLRVEVDSANSE---RRVQ 534
           +     + ++E+PS R+ W D+                      ++ +S+  E    +V 
Sbjct: 130 SELASESPSIETPSPRISWADMAQEDELEEEEEHEANKRS----IDENSSTGEVGVSKVP 185

Query: 535 SKTTLSREKREYIRFRSVKRKKDFACFERINGKLVNILDGLELHTGVFSAAEQKRIVDLI 714
            K  L RE+REYIRFR+V+RKKDF C ER+ GK VNILDGLELH G+FSAAEQKRIVD I
Sbjct: 186 RKAELPREQREYIRFRNVQRKKDFICLERVKGKFVNILDGLELHVGIFSAAEQKRIVDFI 245

Query: 715 YSLEEKGRNRELRARTFSAPKKWMKGKGRMTIQFGCCYNYAVSKDGREPGILQDEHVDPI 894
           Y L+E GRN +L+ RT+SAP+KWM+GKGR+TIQFGCCYNYA  K+G  PGILQ+E VDPI
Sbjct: 246 YELQEMGRNGQLKERTYSAPQKWMRGKGRVTIQFGCCYNYATDKNGNPPGILQNEVVDPI 305


>ref|XP_003544576.1| PREDICTED: uncharacterized protein LOC100797674 [Glycine max]
          Length = 522

 Score =  262 bits (669), Expect = 9e-68
 Identities = 136/267 (50%), Positives = 173/267 (64%), Gaps = 11/267 (4%)
 Frame = +1

Query: 127 DPFILNYQPSELKIAAEFLTNWLPFLTKDLCRTCTHTLSNRIRSLDP----------DHV 276
           DPF+LNY  S+L+ A+EFL  WLPFL++DLC  CT +LS+RIRS+DP          D  
Sbjct: 21  DPFLLNYSTSDLRTASEFLATWLPFLSRDLCTRCTLSLSDRIRSIDPGEAPQNEIPSDQN 80

Query: 277 GEETHDDCDS-DTNLLGSWTESANGFSTSVPESSQTTTNVESPSARMLWGDIXXXXXXXX 453
             +  D+CD+ D + LGSW + A              +NVE+PS R+ W D+        
Sbjct: 81  DVDVEDNCDNCDAHSLGSWKDGAE----------VNNSNVETPSQRISWADMAQEDDEFG 130

Query: 454 XXXXXXXXXKHFLRVEVDSANSERRVQSKTTLSREKREYIRFRSVKRKKDFACFERINGK 633
                       +      ++  + V  K TL RE+REYIRF +V+RKKDF CFER+NGK
Sbjct: 131 DEEDSNNGGNFAVGDSNAFSHVAKVVAEKPTLPREQREYIRFMNVRRKKDFICFERVNGK 190

Query: 634 LVNILDGLELHTGVFSAAEQKRIVDLIYSLEEKGRNRELRARTFSAPKKWMKGKGRMTIQ 813
           LVNIL+GLELHTG+FSAAEQKRIV+ + SL+E GR  EL+ +TFSAP+KWM+GKGR TIQ
Sbjct: 191 LVNILEGLELHTGIFSAAEQKRIVNYVASLQEMGRKGELKEQTFSAPQKWMRGKGRQTIQ 250

Query: 814 FGCCYNYAVSKDGREPGILQDEHVDPI 894
           FGCCYNYAV +DG  PGIL +  VDPI
Sbjct: 251 FGCCYNYAVDRDGNPPGILGNGMVDPI 277


>ref|XP_002886139.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297331979|gb|EFH62398.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 500

 Score =  257 bits (656), Expect = 3e-66
 Identities = 147/294 (50%), Positives = 172/294 (58%), Gaps = 36/294 (12%)
 Frame = +1

Query: 121 DDDPFILNYQPSELKIAAEFLTNWLPFLTKDLCRTCTHTLSNRIRSLDPDHV-------G 279
           +DD F+  YQPSELKI +EFLTNWLPFL+KDLC+ C H LSNRIRSLDP H        G
Sbjct: 2   EDDSFLRQYQPSELKIVSEFLTNWLPFLSKDLCKDCNHLLSNRIRSLDPGHCSNTDKVDG 61

Query: 280 EETHDDC-----------------------DSDTNLLGSWTESANGFST------SVPES 372
           E   D C                       D D + LGSW ES   F +      SV  S
Sbjct: 62  ECKTDSCSVVGTMGSERVSNNVDGKSENGEDCDNHPLGSWKESEIVFGSISEVLGSVLPS 121

Query: 373 SQTTTNVESPSARMLWGDIXXXXXXXXXXXXXXXXXKHFLRVEVDSANSERRVQSKTTLS 552
                 VE+ S RM W D+                 +   R   D+  S  R   K  LS
Sbjct: 122 RPAV--VETASPRMSWADMTQEDDEFDEEEEEEEQ-RDSSRKGFDA--SSMRTPVKPKLS 176

Query: 553 REKREYIRFRSVKRKKDFACFERINGKLVNILDGLELHTGVFSAAEQKRIVDLIYSLEEK 732
           R++RE +R  +VKRKKDF C ER+ GK+VN+LDGLELHTGVFSA EQKRIVD +Y L+EK
Sbjct: 177 RDQRENLRLMNVKRKKDFICLERVKGKIVNVLDGLELHTGVFSAVEQKRIVDQVYQLQEK 236

Query: 733 GRNRELRARTFSAPKKWMKGKGRMTIQFGCCYNYAVSKDGREPGILQDEHVDPI 894
           GR  EL+ RTF+AP KWM+GKGR TIQFGCCYNYA  + G  PGILQ E VDP+
Sbjct: 237 GRKGELKKRTFTAPHKWMRGKGRETIQFGCCYNYAPDRAGNPPGILQREEVDPL 290


>ref|XP_002530736.1| conserved hypothetical protein [Ricinus communis]
           gi|223529700|gb|EEF31642.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 511

 Score =  256 bits (654), Expect = 5e-66
 Identities = 141/302 (46%), Positives = 181/302 (59%), Gaps = 45/302 (14%)
 Frame = +1

Query: 124 DDPFILNYQPSELKIAAEFLTNWLPFLTKDLCRTCTHTLSNRIRSLDPDHVGE------- 282
           DDPF+L YQPS+L+IA+EFLT WLPFL++DLC  CT TLS+RIRSLD +   +       
Sbjct: 10  DDPFLLQYQPSDLRIASEFLTTWLPFLSRDLCHHCTRTLSHRIRSLDSELHSDAEPSTST 69

Query: 283 --------------ETHDDCDS----------------DTNLLGSWTESANGFSTSVPES 372
                         E + DCD                 DTN LGSW + +NG+S  V E 
Sbjct: 70  KTITPANSNNVDSHENYCDCDDNCENNSTESNKDGDGDDTNSLGSWKDGSNGWSEPVSEP 129

Query: 373 SQT-----TTNVESPSARMLWGDIXXXXXXXXXXXXXXXXXKHFLRVEVDSANSERRVQS 537
             +       +++ P+ R+ W D+                 +   R+   SA++ +   S
Sbjct: 130 PSSGILGAPPSIQVPTHRISWADMAQEDEFEEEVEEEEDRRELDKRMVTLSASTGKMKIS 189

Query: 538 ---KTTLSREKREYIRFRSVKRKKDFACFERINGKLVNILDGLELHTGVFSAAEQKRIVD 708
              K  LSRE+RE IRF+SVKRKKDF C ER+ GK VNIL+GLELHT VFSA EQ RIV+
Sbjct: 190 TVEKPKLSREQRESIRFKSVKRKKDFICLERVKGKFVNILEGLELHTCVFSAVEQNRIVN 249

Query: 709 LIYSLEEKGRNRELRARTFSAPKKWMKGKGRMTIQFGCCYNYAVSKDGREPGILQDEHVD 888
            ++ LEE G+  EL+ RT++AP+KWM+GKGR+TIQFGCCYNYA  K+G  PGILQ E VD
Sbjct: 250 YVHELEEMGKRGELKERTYTAPQKWMRGKGRVTIQFGCCYNYATDKNGNPPGILQSETVD 309

Query: 889 PI 894
           PI
Sbjct: 310 PI 311


Top